RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C TRK1P12685 1235 aa13.24□□□□□ -0.29
YSR3YKR053C PAP2P53632 584 aaKnown RBP13.24□□□□□ -0.29
YSR3YKR053C NST1P53935 1240 aa13.24□□□□□ -0.29
YSR3YKR053C ALD3P54114 506 aa13.24□□□□□ -0.29
YSR3YKR053C HSP104P31539 908 aaKnown RBP13.23□□□□□ -0.29
YSR3YKR053C NUP145P49687 1317 aa13.22□□□□□ -0.29
YSR3YKR053C AKL1P38080 1108 aaKnown RBP13.22□□□□□ -0.29
YSR3YKR053C RPG1P38249 964 aaKnown RBP13.22□□□□□ -0.29
YSR3YKR053C YBP2P53169 641 aa13.21□□□□□ -0.29
YSR3YKR053C GRE2Q12068 342 aaKnown RBP13.21□□□□□ -0.29
YSR3YKR053C BUG1Q12191 341 aa13.21□□□□□ -0.29
YSR3YKR053C UTP22P53254 1237 aaPredicted RBP13.19□□□□□ -0.3
YSR3YKR053C SSA1P10591 642 aaKnown RBP13.17□□□□□ -0.3
YSR3YKR053C AOS1Q06624 347 aa13.17□□□□□ -0.3
YSR3YKR053C PSD2P53037 1138 aaKnown RBP13.14□□□□□ -0.31
YSR3YKR053C TOS1P38288 455 aa13.13□□□□□ -0.31
YSR3YKR053C NTH2P35172 780 aa13.12□□□□□ -0.31
YSR3YKR053C RRP46P53256 223 aaPredicted RBP13.12□□□□□ -0.31
YSR3YKR053C IOC4Q04213 475 aa13.12□□□□□ -0.31
YSR3YKR053C TUM1Q08686 304 aaKnown RBP13.12□□□□□ -0.31
YSR3YKR053C KCC4P25389 1037 aa13.1□□□□□ -0.31
YSR3YKR053C RMT2Q03305 412 aa13.1□□□□□ -0.31
YSR3YKR053C SAP155P43612 1002 aa13.08□□□□□ -0.32
YSR3YKR053C MDG1P53885 366 aa13.06□□□□□ -0.32
YSR3YKR053C HPC2Q01448 625 aa13.06□□□□□ -0.32
YSR3YKR053C UGA3P26370 528 aa13.05□□□□□ -0.32
YSR3YKR053C NYV1Q12255 253 aa13.05□□□□□ -0.32
YSR3YKR053C YNL050CP53952 270 aa13.04□□□□□ -0.32
YSR3YKR053C ALE1Q08548 619 aa13.04□□□□□ -0.32
YSR3YKR053C NOP53Q12080 455 aaKnown RBP13.04□□□□□ -0.32
YSR3YKR053C RTR1P40084 226 aaPredicted RBP13.02□□□□□ -0.33
YSR3YKR053C EAF6P47128 113 aa13.02□□□□□ -0.33
YSR3YKR053C PHM7Q12252 991 aa13.02□□□□□ -0.33
YSR3YKR053C TEA1P47988 759 aa13.01□□□□□ -0.33
YSR3YKR053C NSE3Q05541 303 aa13.01□□□□□ -0.33
YSR3YKR053C RIX7Q07844 837 aaKnown RBP13.01□□□□□ -0.33
YSR3YKR053C RIM15P43565 1770 aa13.01□□□□□ -0.33
YSR3YKR053C PRD1P25375 712 aa13□□□□□ -0.33
YSR3YKR053C RRT14P40470 206 aa13□□□□□ -0.33
YSR3YKR053C MSN5P52918 1224 aa13□□□□□ -0.33
YSR3YKR053C BUD27P43573 796 aaKnown RBP RIP-Chip data12.99□□□□□ -0.33not detected
YSR3YKR053C CTT1P06115 562 aa12.98□□□□□ -0.33
YSR3YKR053C SSP2Q08646 371 aa12.98□□□□□ -0.33
YSR3YKR053C YKL222CP35995 705 aa12.97□□□□□ -0.33
YSR3YKR053C ERT1P38140 529 aa12.97□□□□□ -0.33
YSR3YKR053C LYS2P07702 1392 aa12.96□□□□□ -0.33
YSR3YKR053C YFR016CP43597 1233 aaKnown RBP12.96□□□□□ -0.33
YSR3YKR053C LPD1P09624 499 aaKnown RBP12.94□□□□□ -0.34
YSR3YKR053C MAM1P40065 302 aa12.94□□□□□ -0.34
YSR3YKR053C ZDS1P50111 915 aaKnown RBP12.94□□□□□ -0.34
YSR3YKR053C SER1P33330 395 aaKnown RBP12.93□□□□□ -0.34
YSR3YKR053C YER156CP40093 338 aaKnown RBP12.93□□□□□ -0.34
YSR3YKR053C CTI6Q08923 506 aa12.93□□□□□ -0.34
YSR3YKR053C RAT1Q02792 1006 aaKnown RBP12.92□□□□□ -0.34
YSR3YKR053C THI22Q06490 572 aa12.92□□□□□ -0.34
YSR3YKR053C KIN4Q01919 800 aa12.91□□□□□ -0.34
YSR3YKR053C PFF1P38244 976 aa12.9□□□□□ -0.34
YSR3YKR053C CWH41P53008 833 aa12.9□□□□□ -0.34
YSR3YKR053C YGL082WP53155 381 aa12.9□□□□□ -0.34
YSR3YKR053C MPP10P47083 593 aaKnown RBP12.89□□□□□ -0.35
YSR3YKR053C ARG8P18544 423 aa12.88□□□□□ -0.35
YSR3YKR053C DIB1Q06819 143 aaPredicted RBP12.88□□□□□ -0.35
YSR3YKR053C BMS1Q08965 1183 aaKnown RBP12.88□□□□□ -0.35
YSR3YKR053C COQ4O13525 335 aa12.87□□□□□ -0.35
YSR3YKR053C GYP7P48365 746 aa12.86□□□□□ -0.35
YSR3YKR053C YDL144CQ07589 356 aa12.86□□□□□ -0.35
YSR3YKR053C BDF2Q07442 638 aa12.85□□□□□ -0.35
YSR3YKR053C RTT109Q07794 436 aa12.85□□□□□ -0.35
YSR3YKR053C YPR204WQ08995 1032 aa12.85□□□□□ -0.35
YSR3YKR053C DCD1P06773 312 aa12.84□□□□□ -0.35
YSR3YKR053C SMY1P32364 656 aaKnown RBP12.84□□□□□ -0.35
YSR3YKR053C HEF3P53978 1044 aaKnown RBP12.83□□□□□ -0.36
YSR3YKR053C YOL057WQ08225 711 aa12.83□□□□□ -0.36
YSR3YKR053C APL2P36000 726 aaPredicted RBP12.82□□□□□ -0.36
YSR3YKR053C ERO1Q03103 563 aa12.82□□□□□ -0.36
YSR3YKR053C IRC3Q06683 689 aa12.82□□□□□ -0.36
YSR3YKR053C SSK22P25390 1331 aaPredicted RBP12.82□□□□□ -0.36
YSR3YKR053C ZDS2P54786 942 aa12.81□□□□□ -0.36
YSR3YKR053C YBR287WP38355 427 aa12.8□□□□□ -0.36
YSR3YKR053C SIT4P20604 311 aa12.79□□□□□ -0.36
YSR3YKR053C SQS1P53866 767 aaKnown RBP12.79□□□□□ -0.36
YSR3YKR053C VPS64Q03944 604 aa12.79□□□□□ -0.36
YSR3YKR053C HAT1Q12341 374 aa12.79□□□□□ -0.36
YSR3YKR053C RPS9BP05755 195 aaKnown RBP12.78□□□□□ -0.36
YSR3YKR053C TPD3P31383 635 aa12.78□□□□□ -0.36
YSR3YKR053C DNM1P54861 757 aa12.78□□□□□ -0.36
YSR3YKR053C YLR271WQ06152 274 aa12.78□□□□□ -0.36
YSR3YKR053C RPP0P05317 312 aaKnown RBP12.77□□□□□ -0.37
YSR3YKR053C FPK1P53739 893 aa12.76□□□□□ -0.37
YSR3YKR053C SRT1Q03175 343 aa12.75□□□□□ -0.37
YSR3YKR053C UTP10P42945 1769 aaKnown RBP12.74□□□□□ -0.37
YSR3YKR053C UBP16Q02863 499 aa12.74□□□□□ -0.37
YSR3YKR053C CST6P40535 587 aa12.73□□□□□ -0.37
YSR3YKR053C YJR008WP47085 338 aa12.73□□□□□ -0.37
YSR3YKR053C SYF1Q04048 859 aaPredicted RBP12.73□□□□□ -0.37
YSR3YKR053C YDR306CQ06640 478 aa12.73□□□□□ -0.37
YSR3YKR053C GRX6Q12438 231 aa12.73□□□□□ -0.37
YSR3YKR053C PKH1Q03407 766 aa12.72□□□□□ -0.37
YSR3YKR053C SWI1P09547 1314 aa12.71□□□□□ -0.37
YSR3YKR053C CAF20P12962 161 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms