RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR040C	YIR040C	TEC1	P18412	486 aa		4.82	□□□□□ -1.64
YIR040C	YIR040C	YDJ1	P25491	409 aa	Known RBP	4.82	□□□□□ -1.64
YIR040C	YIR040C	ASH1	P34233	588 aa		4.81	□□□□□ -1.64
YIR040C	YIR040C	YJL007C	P47080	104 aa		4.81	□□□□□ -1.64
YIR040C	YIR040C	AFT1	P22149	690 aa		4.8	□□□□□ -1.64
YIR040C	YIR040C	MRT4	P33201	236 aa	Known RBP	4.8	□□□□□ -1.64
YIR040C	YIR040C	NAF1	P53919	492 aa	Known RBP	4.8	□□□□□ -1.64
YIR040C	YIR040C	SPT5	P27692	1063 aa	Known RBP	4.79	□□□□□ -1.64
YIR040C	YIR040C	BIM1	P40013	344 aa		4.79	□□□□□ -1.64
YIR040C	YIR040C	YNL108C	P53929	270 aa		4.79	□□□□□ -1.64
YIR040C	YIR040C	APP1	P53933	587 aa		4.79	□□□□□ -1.64
YIR040C	YIR040C	URN1	Q06525	465 aa	Known RBP	4.79	□□□□□ -1.64
YIR040C	YIR040C	SUP45	P12385	437 aa	Known RBP	4.78	□□□□□ -1.64
YIR040C	YIR040C	ISF1	P32488	338 aa		4.78	□□□□□ -1.64
YIR040C	YIR040C	ATG32	P40458	529 aa		4.78	□□□□□ -1.64
YIR040C	YIR040C	ENO2	P00925	437 aa	Known RBP	4.77	□□□□□ -1.65
YIR040C	YIR040C	GUT2	P32191	649 aa		4.77	□□□□□ -1.65
YIR040C	YIR040C	EMW1	P42842	904 aa	Known RBP	4.77	□□□□□ -1.65
YIR040C	YIR040C	BRE2	P43132	505 aa		4.77	□□□□□ -1.65
YIR040C	YIR040C	FRA1	Q07825	749 aa		4.77	□□□□□ -1.65
YIR040C	YIR040C	MCM16	Q12262	181 aa		4.77	□□□□□ -1.65
YIR040C	YIR040C	EMP47	P43555	445 aa		4.76	□□□□□ -1.65
YIR040C	YIR040C	HST3	P53687	447 aa		4.76	□□□□□ -1.65
YIR040C	YIR040C	YBL086C	P38177	466 aa		4.75	□□□□□ -1.65
YIR040C	YIR040C	YJR115W	P47152	169 aa		4.75	□□□□□ -1.65
YIR040C	YIR040C	HGH1	P48362	394 aa	Known RBP	4.75	□□□□□ -1.65
YIR040C	YIR040C	STE20	Q03497	939 aa	Known RBP	4.75	□□□□□ -1.65
YIR040C	YIR040C	TIF1	P10081	395 aa	Known RBP	4.74	□□□□□ -1.65
YIR040C	YIR040C	MSB3	P48566	633 aa	Predicted RBP	4.74	□□□□□ -1.65
YIR040C	YIR040C	APL6	P46682	809 aa		4.73	□□□□□ -1.65
YIR040C	YIR040C	RDS2	P19541	446 aa	Known RBP	4.72	□□□□□ -1.65
YIR040C	YIR040C	UGA3	P26370	528 aa		4.72	□□□□□ -1.65
YIR040C	YIR040C	MKS1	P34072	584 aa		4.72	□□□□□ -1.65
YIR040C	YIR040C	RIM21	P48565	533 aa		4.72	□□□□□ -1.65
YIR040C	YIR040C	GCR2	Q01722	534 aa		4.72	□□□□□ -1.65
YIR040C	YIR040C	DFG5	Q05031	458 aa		4.72	□□□□□ -1.65
YIR040C	YIR040C	PTK2	P47116	818 aa	Known RBP	4.71	□□□□□ -1.66
YIR040C	YIR040C	MRX10	Q05648	414 aa		4.71	□□□□□ -1.66
YIR040C	YIR040C	ENO1	P00924	437 aa	Known RBP	4.7	□□□□□ -1.66
YIR040C	YIR040C	FBP26	P32604	452 aa		4.7	□□□□□ -1.66
YIR040C	YIR040C	HAL5	P38970	855 aa	Known RBP	4.7	□□□□□ -1.66
YIR040C	YIR040C	MRX12	P47084	519 aa		4.7	□□□□□ -1.66
YIR040C	YIR040C	ATG20	Q07528	640 aa		4.7	□□□□□ -1.66
YIR040C	YIR040C	MET22	P32179	357 aa		4.69	□□□□□ -1.66
YIR040C	YIR040C	RTG2	P32608	588 aa	Known RBP	4.69	□□□□□ -1.66
YIR040C	YIR040C	YPP1	P46951	817 aa		4.69	□□□□□ -1.66
YIR040C	YIR040C	YPR204W	Q08995	1032 aa		4.69	□□□□□ -1.66
YIR040C	YIR040C	STE6	P12866	1290 aa		4.68	□□□□□ -1.66
YIR040C	YIR040C	SOH1	P38633	127 aa		4.68	□□□□□ -1.66
YIR040C	YIR040C	RPL34B	P40525	121 aa	Known RBP	4.68	□□□□□ -1.66
YIR040C	YIR040C	AAD14	P42884	376 aa		4.68	□□□□□ -1.66
YIR040C	YIR040C	ISR1	Q06098	443 aa	Known RBP	4.68	□□□□□ -1.66
YIR040C	YIR040C	RTT106	P40161	455 aa		4.67	□□□□□ -1.66
YIR040C	YIR040C	ISU1	Q03020	165 aa		4.67	□□□□□ -1.66
YIR040C	YIR040C	SRF1	Q12516	437 aa		4.66	□□□□□ -1.66
YIR040C	YIR040C	ARG82	P07250	355 aa		4.65	□□□□□ -1.67
YIR040C	YIR040C	PEP12	P32854	288 aa		4.65	□□□□□ -1.67
YIR040C	YIR040C	DLD1	P32891	587 aa		4.65	□□□□□ -1.67
YIR040C	YIR040C	NUP85	P46673	744 aa		4.65	□□□□□ -1.67
YIR040C	YIR040C	BDS1	Q08347	646 aa		4.65	□□□□□ -1.67
YIR040C	YIR040C	ENV9	Q08651	330 aa		4.65	□□□□□ -1.67
YIR040C	YIR040C	YDR444W	Q04093	687 aa		4.64	□□□□□ -1.67
YIR040C	YIR040C	UTP13	Q05946	817 aa	Known RBP	4.64	□□□□□ -1.67
YIR040C	YIR040C	SPT2	P06843	333 aa	Predicted RBP	4.63	□□□□□ -1.67
YIR040C	YIR040C	ATG3	P40344	310 aa		4.63	□□□□□ -1.67
YIR040C	YIR040C	LCB5	Q06147	687 aa	Known RBP	4.63	□□□□□ -1.67
YIR040C	YIR040C	OPT2	Q06593	877 aa		4.63	□□□□□ -1.67
YIR040C	YIR040C	HDA3	Q06623	655 aa		4.63	□□□□□ -1.67
YIR040C	YIR040C	WTM2	Q12206	467 aa		4.63	□□□□□ -1.67
YIR040C	YIR040C	AIM44	Q99299	758 aa		4.63	□□□□□ -1.67
YIR040C	YIR040C	GAR1	P28007	205 aa	Known RBP	4.62	□□□□□ -1.67
YIR040C	YIR040C	UTR2	P32623	467 aa		4.62	□□□□□ -1.67
YIR040C	YIR040C	TTI1	P36097	1038 aa		4.62	□□□□□ -1.67
YIR040C	YIR040C	YJR098C	P47139	656 aa		4.62	□□□□□ -1.67
YIR040C	YIR040C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
YIR040C	YIR040C	DAT1	P13483	248 aa	Known RBP	4.61	□□□□□ -1.67
YIR040C	YIR040C	MIP1	P15801	1254 aa		4.61	□□□□□ -1.67
YIR040C	YIR040C	KTR7	P40504	517 aa		4.61	□□□□□ -1.67
YIR040C	YIR040C	YRB30	P53107	440 aa	Predicted RBP	4.61	□□□□□ -1.67
YIR040C	YIR040C	LSC2	P53312	427 aa		4.61	□□□□□ -1.67
YIR040C	YIR040C	GLY1	P37303	387 aa	Known RBP	4.6	□□□□□ -1.67
YIR040C	YIR040C	SLX8	P40072	274 aa		4.6	□□□□□ -1.67
YIR040C	YIR040C	YPL062W	Q02781	134 aa		4.59	□□□□□ -1.67
YIR040C	YIR040C	YDL176W	Q12027	708 aa		4.59	□□□□□ -1.67
YIR040C	YIR040C	TCB1	Q12466	1186 aa		4.59	□□□□□ -1.67
YIR040C	YIR040C	CPS1	P27614	576 aa		4.58	□□□□□ -1.68
YIR040C	YIR040C	UTP7	P40055	554 aa	Known RBP	4.58	□□□□□ -1.68
YIR040C	YIR040C	YLR346C	Q06139	101 aa		4.58	□□□□□ -1.68
YIR040C	YIR040C	TY1A-BL	Q12266	440 aa		4.58	□□□□□ -1.68
YIR040C	YIR040C	PDI1	P17967	522 aa	Known RBP	4.57	□□□□□ -1.68
YIR040C	YIR040C	TBS1	P38114	1094 aa		4.57	□□□□□ -1.68
YIR040C	YIR040C	DLD3	P39976	496 aa	Known RBP	4.57	□□□□□ -1.68
YIR040C	YIR040C	AIM9	P40053	627 aa	Known RBP	4.57	□□□□□ -1.68
YIR040C	YIR040C	RPP2B	P02400	110 aa	Known RBP	4.56	□□□□□ -1.68
YIR040C	YIR040C	SWI5	P08153	709 aa		4.56	□□□□□ -1.68
YIR040C	YIR040C	TGL4	P36165	910 aa		4.56	□□□□□ -1.68
YIR040C	YIR040C	SSN3	P39073	555 aa		4.56	□□□□□ -1.68
YIR040C	YIR040C	ACO2	P39533	789 aa		4.56	□□□□□ -1.68
YIR040C	YIR040C	ACS2	P52910	683 aa	Known RBP	4.56	□□□□□ -1.68
YIR040C	YIR040C	SCW11	P53189	542 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms