RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	KIP2	P28743	706 aa		5.12	□□□□□ -1.59
YPS6	YIR039C	TYW1	Q08960	810 aa	Known RBP	5.12	□□□□□ -1.59
YPS6	YIR039C	MMP1	Q12372	583 aa		5.12	□□□□□ -1.59
YPS6	YIR039C	SLY41	P22215	453 aa		5.12	□□□□□ -1.59
YPS6	YIR039C	SCJ1	P25303	377 aa		5.12	□□□□□ -1.59
YPS6	YIR039C	GLY1	P37303	387 aa	Known RBP	5.12	□□□□□ -1.59
YPS6	YIR039C	TFB3	Q03290	321 aa		5.12	□□□□□ -1.59
YPS6	YIR039C	SSA2	P10592	639 aa	Known RBP	5.11	□□□□□ -1.59
YPS6	YIR039C	HST2	P53686	357 aa		5.11	□□□□□ -1.59
YPS6	YIR039C	HSL1	P34244	1518 aa		5.1	□□□□□ -1.59
YPS6	YIR039C	YIR007W	P40566	764 aa		5.1	□□□□□ -1.59
YPS6	YIR039C	NUP85	P46673	744 aa		5.1	□□□□□ -1.59
YPS6	YIR039C	SCW11	P53189	542 aa		5.1	□□□□□ -1.59
YPS6	YIR039C	ALR1	Q08269	859 aa		5.1	□□□□□ -1.59
YPS6	YIR039C	SPT6	P23615	1451 aa	Known RBP	5.09	□□□□□ -1.6
YPS6	YIR039C	ESS1	P22696	170 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	MRT4	P33201	236 aa	Known RBP	5.08	□□□□□ -1.6
YPS6	YIR039C	IXR1	P33417	597 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	SWR1	Q05471	1514 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	MIP1	P15801	1254 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	KTR1	P27810	393 aa	Known RBP	5.08	□□□□□ -1.6
YPS6	YIR039C	BRL1	P38770	471 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	RTT106	P40161	455 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	RPA14	P50106	137 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	TBF1	Q02457	562 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	HPF1	Q05164	967 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	TY1A-BL	Q12266	440 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	YDL206W	Q12424	762 aa		5.08	□□□□□ -1.6
YPS6	YIR039C	PKH3	Q03306	898 aa	Predicted RBP	5.07	□□□□□ -1.6
YPS6	YIR039C	YPR097W	Q06839	1073 aa		5.07	□□□□□ -1.6
YPS6	YIR039C	PKC1	P24583	1151 aa		5.06	□□□□□ -1.6
YPS6	YIR039C	PUS6	P53294	404 aa		5.06	□□□□□ -1.6
YPS6	YIR039C	ARG8	P18544	423 aa		5.05	□□□□□ -1.6
YPS6	YIR039C	YJU3	P28321	313 aa		5.05	□□□□□ -1.6
YPS6	YIR039C	HIR3	P47171	1648 aa		5.02	□□□□□ -1.61
YPS6	YIR039C	TRM1	P15565	570 aa	Known RBP	5.02	□□□□□ -1.61
YPS6	YIR039C	LSC2	P53312	427 aa		5.02	□□□□□ -1.61
YPS6	YIR039C	YPR204W	Q08995	1032 aa		5.02	□□□□□ -1.61
YPS6	YIR039C	BIM1	P40013	344 aa		5.01	□□□□□ -1.61
YPS6	YIR039C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
YPS6	YIR039C	UBP2	Q01476	1272 aa		5.01	□□□□□ -1.61
YPS6	YIR039C	SUB2	Q07478	446 aa	Known RBP	5.01	□□□□□ -1.61
YPS6	YIR039C	RAD59	Q12223	238 aa		5.01	□□□□□ -1.61
YPS6	YIR039C	ARG82	P07250	355 aa		5.01	□□□□□ -1.61
YPS6	YIR039C	SSA1	P10591	642 aa	Known RBP	5.01	□□□□□ -1.61
YPS6	YIR039C	XRN1	P22147	1528 aa	Known RBP	5.01	□□□□□ -1.61
YPS6	YIR039C	GEF1	P37020	779 aa		5	□□□□□ -1.61
YPS6	YIR039C	AAD14	P42884	376 aa		5	□□□□□ -1.61
YPS6	YIR039C	YJL007C	P47080	104 aa		5	□□□□□ -1.61
YPS6	YIR039C	YML020W	Q03722	664 aa		5	□□□□□ -1.61
YPS6	YIR039C	ATG32	P40458	529 aa		4.99	□□□□□ -1.61
YPS6	YIR039C	NOP8	Q08287	484 aa	Predicted RBP	4.99	□□□□□ -1.61
YPS6	YIR039C	YBL036C	P38197	257 aa		4.98	□□□□□ -1.61
YPS6	YIR039C	RSC30	P38781	883 aa		4.98	□□□□□ -1.61
YPS6	YIR039C	ICP55	P40051	511 aa		4.98	□□□□□ -1.61
YPS6	YIR039C	YBL086C	P38177	466 aa		4.97	□□□□□ -1.61
YPS6	YIR039C	VAC17	P25591	423 aa		4.97	□□□□□ -1.61
YPS6	YIR039C	YJR098C	P47139	656 aa		4.97	□□□□□ -1.61
YPS6	YIR039C	PUS1	Q12211	544 aa	Known RBP	4.97	□□□□□ -1.61
YPS6	YIR039C	DLD1	P32891	587 aa		4.96	□□□□□ -1.62
YPS6	YIR039C	ROG3	P43602	733 aa		4.96	□□□□□ -1.62
YPS6	YIR039C	DPH6	Q12429	685 aa		4.96	□□□□□ -1.62
YPS6	YIR039C	TCB1	Q12466	1186 aa		4.96	□□□□□ -1.62
YPS6	YIR039C	TY1A-MR1	Q04215	440 aa		4.95	□□□□□ -1.62
YPS6	YIR039C	TIF1	P10081	395 aa	Known RBP	4.94	□□□□□ -1.62
YPS6	YIR039C	SSA4	P22202	642 aa	Known RBP	4.94	□□□□□ -1.62
YPS6	YIR039C	CSE4	P36012	229 aa		4.94	□□□□□ -1.62
YPS6	YIR039C	SLX8	P40072	274 aa		4.94	□□□□□ -1.62
YPS6	YIR039C	DNA2	P38859	1522 aa		4.94	□□□□□ -1.62
YPS6	YIR039C	BIO2	P32451	375 aa		4.94	□□□□□ -1.62
YPS6	YIR039C	RPL34B	P40525	121 aa	Known RBP	4.94	□□□□□ -1.62
YPS6	YIR039C	LSB3	P43603	459 aa	Known RBP	4.94	□□□□□ -1.62
YPS6	YIR039C	OSH7	P38755	437 aa		4.93	□□□□□ -1.62
YPS6	YIR039C	REV3	P14284	1504 aa		4.92	□□□□□ -1.62
YPS6	YIR039C	APP1	P53933	587 aa		4.92	□□□□□ -1.62
YPS6	YIR039C	PHM7	Q12252	991 aa		4.92	□□□□□ -1.62
YPS6	YIR039C	TAF2	P23255	1407 aa		4.91	□□□□□ -1.62
YPS6	YIR039C	CCP1	P00431	361 aa		4.91	□□□□□ -1.62
YPS6	YIR039C	MAK16	P10962	306 aa	Predicted RBP	4.91	□□□□□ -1.62
YPS6	YIR039C	TTI1	P36097	1038 aa		4.9	□□□□□ -1.62
YPS6	YIR039C	LYS5	P50113	272 aa		4.9	□□□□□ -1.62
YPS6	YIR039C	CPS1	P27614	576 aa		4.9	□□□□□ -1.63
YPS6	YIR039C	EMW1	P42842	904 aa	Known RBP	4.9	□□□□□ -1.63
YPS6	YIR039C	ITT1	Q04638	464 aa		4.9	□□□□□ -1.63
YPS6	YIR039C	KOG1	P38873	1557 aa		4.89	□□□□□ -1.63
YPS6	YIR039C	YNL108C	P53929	270 aa		4.89	□□□□□ -1.63
YPS6	YIR039C	YDJ1	P25491	409 aa	Known RBP	4.88	□□□□□ -1.63
YPS6	YIR039C	RTG2	P32608	588 aa	Known RBP	4.88	□□□□□ -1.63
YPS6	YIR039C	MDJ1	P35191	511 aa		4.88	□□□□□ -1.63
YPS6	YIR039C	JJJ3	P47138	172 aa		4.88	□□□□□ -1.63
YPS6	YIR039C	SPT5	P27692	1063 aa	Known RBP	4.87	□□□□□ -1.63
YPS6	YIR039C	NAF1	P53919	492 aa	Known RBP	4.87	□□□□□ -1.63
YPS6	YIR039C	NOB1	Q08444	459 aa	Known RBP	4.87	□□□□□ -1.63
YPS6	YIR039C	THO2	P53552	1597 aa	Known RBP	4.87	□□□□□ -1.63
YPS6	YIR039C	SUP45	P12385	437 aa	Known RBP	4.86	□□□□□ -1.63
YPS6	YIR039C	TEC1	P18412	486 aa		4.86	□□□□□ -1.63
YPS6	YIR039C	FIG4	P42837	879 aa		4.86	□□□□□ -1.63
YPS6	YIR039C	NSG2	P53898	299 aa		4.86	□□□□□ -1.63
YPS6	YIR039C	MKS1	P34072	584 aa		4.85	□□□□□ -1.63
YPS6	YIR039C	SIN3	P22579	1536 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms