RNA–Protein interactions for RNA: YIR012W

SQT1, Transcript of Protein involved in 60S ribosomal subunit assembly or modification, yeastyeast

Gene SQT1, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQT1YIR012W CSE4P36012 229 aa8.04□□□□□ -1.12
SQT1YIR012W VNX1P42839 908 aa8.04□□□□□ -1.12
SQT1YIR012W RAD2P07276 1031 aa8.03□□□□□ -1.12
SQT1YIR012W RTT109Q07794 436 aa8.03□□□□□ -1.12
SQT1YIR012W YIL092WP40497 633 aa8.02□□□□□ -1.13
SQT1YIR012W GAS4Q08271 471 aa8.02□□□□□ -1.13
SQT1YIR012W DPS1P04802 557 aaKnown RBP8.01□□□□□ -1.13
SQT1YIR012W BUD27P43573 796 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
SQT1YIR012W CST9Q06032 482 aa8.01□□□□□ -1.13
SQT1YIR012W YRF1-4O13559 1382 aa8□□□□□ -1.13
SQT1YIR012W DAL5P15365 543 aa8□□□□□ -1.13
SQT1YIR012W YMR196WQ04336 1088 aa7.99□□□□□ -1.13
SQT1YIR012W APC1P53886 1748 aa7.98□□□□□ -1.13
SQT1YIR012W AKL1P38080 1108 aaKnown RBP7.98□□□□□ -1.13
SQT1YIR012W YRF1-2P40105 1681 aa7.98□□□□□ -1.13
SQT1YIR012W MRM1P25270 412 aa7.97□□□□□ -1.13
SQT1YIR012W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
SQT1YIR012W POL32P47110 350 aa7.97□□□□□ -1.13
SQT1YIR012W MAK21Q12176 1025 aaKnown RBP7.97□□□□□ -1.13
SQT1YIR012W TY4B-HP0C2J7 1802 aa7.96□□□□□ -1.13
SQT1YIR012W TY4B-JP47024 1803 aa7.96□□□□□ -1.13
SQT1YIR012W YAP5P40574 245 aa7.96□□□□□ -1.14
SQT1YIR012W OPY1P38271 328 aa7.95□□□□□ -1.14
SQT1YIR012W DSD1P53095 428 aa7.95□□□□□ -1.14
SQT1YIR012W IME2P32581 645 aa7.94□□□□□ -1.14
SQT1YIR012W THI12P42883 340 aa7.94□□□□□ -1.14
SQT1YIR012W THI5P43534 340 aa7.94□□□□□ -1.14
SQT1YIR012W THI11P47183 340 aa7.94□□□□□ -1.14
SQT1YIR012W SPP1Q03012 353 aa7.94□□□□□ -1.14
SQT1YIR012W THI13Q07748 340 aa7.94□□□□□ -1.14
SQT1YIR012W RRP5Q05022 1729 aaKnown RBP7.94□□□□□ -1.14
SQT1YIR012W YIL177CP40434 1758 aa7.93□□□□□ -1.14
SQT1YIR012W YJL225CP40889 1758 aa7.93□□□□□ -1.14
SQT1YIR012W YIR014WP40570 242 aa7.93□□□□□ -1.14
SQT1YIR012W YNL050CP53952 270 aa7.93□□□□□ -1.14
SQT1YIR012W NTH2P35172 780 aa7.92□□□□□ -1.14
SQT1YIR012W GYP7P48365 746 aa7.92□□□□□ -1.14
SQT1YIR012W PUF6Q04373 656 aaKnown RBP7.91□□□□□ -1.14
SQT1YIR012W MAM1P40065 302 aa7.9□□□□□ -1.14
SQT1YIR012W RRT14P40470 206 aa7.9□□□□□ -1.14
SQT1YIR012W EDE1P34216 1381 aa7.89□□□□□ -1.15
SQT1YIR012W TRP5P00931 707 aaKnown RBP7.89□□□□□ -1.15
SQT1YIR012W YFR016CP43597 1233 aaKnown RBP7.89□□□□□ -1.15
SQT1YIR012W ZDS1P50111 915 aaKnown RBP7.89□□□□□ -1.15
SQT1YIR012W SRT1Q03175 343 aa7.89□□□□□ -1.15
SQT1YIR012W AIR2Q12476 344 aaKnown RBP7.89□□□□□ -1.15
SQT1YIR012W HSP104P31539 908 aaKnown RBP7.87□□□□□ -1.15
SQT1YIR012W FKS3Q04952 1785 aa7.87□□□□□ -1.15
SQT1YIR012W PRP5P21372 849 aaPredicted RBP7.86□□□□□ -1.15
SQT1YIR012W TIF11P38912 153 aaKnown RBP7.86□□□□□ -1.15
SQT1YIR012W AOS1Q06624 347 aa7.86□□□□□ -1.15
SQT1YIR012W SLM3Q12093 417 aa7.86□□□□□ -1.15
SQT1YIR012W URB1P34241 1764 aaKnown RBP7.86□□□□□ -1.15
SQT1YIR012W ILV3P39522 585 aaKnown RBP7.85□□□□□ -1.15
SQT1YIR012W YPP1P46951 817 aa7.85□□□□□ -1.15
SQT1YIR012W CTF4Q01454 927 aa7.85□□□□□ -1.15
SQT1YIR012W YBR287WP38355 427 aa7.84□□□□□ -1.15
SQT1YIR012W YJL171CP46992 396 aa7.84□□□□□ -1.15
SQT1YIR012W MSB3P48566 633 aaPredicted RBP7.84□□□□□ -1.15
SQT1YIR012W CSI1Q04368 295 aa7.84□□□□□ -1.15
SQT1YIR012W BMS1Q08965 1183 aaKnown RBP7.84□□□□□ -1.15
SQT1YIR012W COQ4O13525 335 aa7.83□□□□□ -1.16
SQT1YIR012W PRP45P28004 379 aaPredicted RBP7.83□□□□□ -1.16
SQT1YIR012W EAF7P53911 425 aaKnown RBP7.83□□□□□ -1.16
SQT1YIR012W UGA3P26370 528 aa7.82□□□□□ -1.16
SQT1YIR012W YNG2P38806 282 aaKnown RBP7.82□□□□□ -1.16
SQT1YIR012W ECM16Q04217 1267 aaKnown RBP7.82□□□□□ -1.16
SQT1YIR012W LYS2P07702 1392 aa7.82□□□□□ -1.16
SQT1YIR012W RPS19AP07280 144 aaKnown RBP7.81□□□□□ -1.16
SQT1YIR012W RPS19BP07281 144 aaPredicted RBP7.81□□□□□ -1.16
SQT1YIR012W PCT1P13259 424 aa7.81□□□□□ -1.16
SQT1YIR012W VPS29P38759 282 aa7.81□□□□□ -1.16
SQT1YIR012W XKS1P42826 600 aa7.81□□□□□ -1.16
SQT1YIR012W YMR1P47147 688 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
SQT1YIR012W SPO1P53541 631 aa7.81□□□□□ -1.16
SQT1YIR012W NSE3Q05541 303 aa7.81□□□□□ -1.16
SQT1YIR012W WSC3Q12215 556 aa7.81□□□□□ -1.16
SQT1YIR012W CLC1P17891 233 aa7.8□□□□□ -1.16
SQT1YIR012W KCC4P25389 1037 aa7.8□□□□□ -1.16
SQT1YIR012W RCR1P38212 213 aa7.8□□□□□ -1.16
SQT1YIR012W NUP145P49687 1317 aa7.79□□□□□ -1.16
SQT1YIR012W NKP2Q06162 153 aa7.79□□□□□ -1.16
SQT1YIR012W TCB1Q12466 1186 aa7.79□□□□□ -1.16
SQT1YIR012W RAD24P32641 659 aa7.78□□□□□ -1.16
SQT1YIR012W SNF7P39929 240 aaKnown RBP7.78□□□□□ -1.16
SQT1YIR012W YOL057WQ08225 711 aa7.78□□□□□ -1.16
SQT1YIR012W RSF2P46974 1380 aa7.78□□□□□ -1.16
SQT1YIR012W NMD2P38798 1089 aaKnown RBP7.77□□□□□ -1.17
SQT1YIR012W GTT3P39996 337 aa7.77□□□□□ -1.17
SQT1YIR012W YGR122WP53272 402 aa7.77□□□□□ -1.17
SQT1YIR012W INP54Q08227 384 aaKnown RBP7.77□□□□□ -1.17
SQT1YIR012W RAD50P12753 1312 aa7.77□□□□□ -1.17
SQT1YIR012W MRP7P12687 371 aa7.75□□□□□ -1.17
SQT1YIR012W RAD4P14736 754 aa7.75□□□□□ -1.17
SQT1YIR012W GCD7P32502 381 aaPredicted RBP7.75□□□□□ -1.17
SQT1YIR012W YDR306CQ06640 478 aa7.75□□□□□ -1.17
SQT1YIR012W NOP8Q08287 484 aaPredicted RBP7.75□□□□□ -1.17
SQT1YIR012W ROX1P25042 368 aa7.74□□□□□ -1.17
SQT1YIR012W RFC1P38630 861 aaKnown RBP7.74□□□□□ -1.17
SQT1YIR012W BOI2P39969 1040 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms