RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C PRE3P38624 215 aa8.18□□□□□ -1.1
YCK1YHR135C ALD4P46367 519 aaKnown RBP8.18□□□□□ -1.1
YCK1YHR135C TAF8Q03750 510 aa8.17□□□□□ -1.1
YCK1YHR135C KRE5P22023 1365 aa8.16□□□□□ -1.1
YCK1YHR135C KEX1P09620 729 aa8.16□□□□□ -1.1
YCK1YHR135C SPE2P21182 396 aa8.16□□□□□ -1.1
YCK1YHR135C ILV3P39522 585 aaKnown RBP8.15□□□□□ -1.1
YCK1YHR135C MID1P41821 548 aa8.15□□□□□ -1.1
YCK1YHR135C ELP4Q02884 456 aaKnown RBP8.14□□□□□ -1.11
YCK1YHR135C PDS5Q04264 1277 aa8.14□□□□□ -1.11
YCK1YHR135C ENP1P38333 483 aaKnown RBP8.14□□□□□ -1.11
YCK1YHR135C VPS70P47161 811 aa8.14□□□□□ -1.11
YCK1YHR135C UBP14P38237 781 aaKnown RBP8.13□□□□□ -1.11
YCK1YHR135C VHR2P40041 505 aa8.13□□□□□ -1.11
YCK1YHR135C ARH1P48360 493 aa8.13□□□□□ -1.11
YCK1YHR135C SLI15P38283 698 aa8.12□□□□□ -1.11
YCK1YHR135C REF2P42073 533 aaPredicted RBP8.12□□□□□ -1.11
YCK1YHR135C MAK10Q02197 733 aa8.11□□□□□ -1.11
YCK1YHR135C YLR326WQ06170 240 aaKnown RBP8.11□□□□□ -1.11
YCK1YHR135C RPP1BP10622 106 aaKnown RBP8.1□□□□□ -1.11
YCK1YHR135C RAD54P32863 898 aa8.1□□□□□ -1.11
YCK1YHR135C KIC1P38692 1080 aa8.1□□□□□ -1.11
YCK1YHR135C MRX12P47084 519 aa8.1□□□□□ -1.11
YCK1YHR135C RIA1P53893 1110 aa8.1□□□□□ -1.11
YCK1YHR135C CFT1Q06632 1357 aaKnown RBP8.09□□□□□ -1.11
YCK1YHR135C TY1B-NL2Q99337 1749 aaKnown RBP8.08□□□□□ -1.12
YCK1YHR135C CHZ1P40019 153 aaPredicted RBP8.07□□□□□ -1.12
YCK1YHR135C HAP5Q02516 242 aa8.07□□□□□ -1.12
YCK1YHR135C DPL1Q05567 589 aa8.07□□□□□ -1.12
YCK1YHR135C MPC54Q08550 464 aa8.07□□□□□ -1.12
YCK1YHR135C YML133CQ03099 1374 aa8.06□□□□□ -1.12
YCK1YHR135C YLL067CQ07888 1374 aa8.06□□□□□ -1.12
YCK1YHR135C YLL066CQ99208 1374 aa8.06□□□□□ -1.12
YCK1YHR135C SPT23P35210 1082 aa8.06□□□□□ -1.12
YCK1YHR135C MAK21Q12176 1025 aaKnown RBP8.06□□□□□ -1.12
YCK1YHR135C NAP1P25293 417 aaKnown RBP8.05□□□□□ -1.12
YCK1YHR135C PCS60P38137 543 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12 RIP-Chip
YCK1YHR135C BCK2P33306 851 aa8.04□□□□□ -1.12
YCK1YHR135C RCM1P53972 490 aa8.04□□□□□ -1.12
YCK1YHR135C PPH3P32345 308 aa8.03□□□□□ -1.12
YCK1YHR135C NMA111P53920 997 aa8.03□□□□□ -1.12
YCK1YHR135C TY4B-HP0C2J7 1802 aa8.02□□□□□ -1.13
YCK1YHR135C TY4B-JP47024 1803 aa8.02□□□□□ -1.13
YCK1YHR135C BNI4P53858 892 aa8.01□□□□□ -1.13
YCK1YHR135C YDR090CQ03193 310 aa8.01□□□□□ -1.13
YCK1YHR135C YDR344CQ05510 147 aa8.01□□□□□ -1.13
YCK1YHR135C ISU2Q12056 156 aa8.01□□□□□ -1.13
YCK1YHR135C PSK1P31374 1356 aa8□□□□□ -1.13
YCK1YHR135C SCT1P32784 759 aa8□□□□□ -1.13
YCK1YHR135C YNR029CP53729 429 aaKnown RBP8□□□□□ -1.13
YCK1YHR135C SNF2P22082 1703 aa8□□□□□ -1.13
YCK1YHR135C COX6P00427 148 aa8□□□□□ -1.13
YCK1YHR135C PRS1P32895 427 aaKnown RBP8□□□□□ -1.13
YCK1YHR135C YEF3P16521 1044 aaKnown RBP7.98□□□□□ -1.13
YCK1YHR135C TRK1P12685 1235 aa7.97□□□□□ -1.13
YCK1YHR135C VRP1P37370 817 aa7.97□□□□□ -1.13
YCK1YHR135C PTC2P39966 464 aaKnown RBP7.97□□□□□ -1.13
YCK1YHR135C CDC73Q06697 393 aa7.97□□□□□ -1.13
YCK1YHR135C YIL177CP40434 1758 aa7.96□□□□□ -1.13
YCK1YHR135C YJL225CP40889 1758 aa7.96□□□□□ -1.13
YCK1YHR135C CPS1P27614 576 aa7.96□□□□□ -1.14
YCK1YHR135C PBS2P08018 668 aa7.95□□□□□ -1.14
YCK1YHR135C YML082WQ04533 649 aaKnown RBP7.95□□□□□ -1.14
YCK1YHR135C PEX21P50091 288 aa7.92□□□□□ -1.14
YCK1YHR135C CSC1Q06538 782 aa7.92□□□□□ -1.14
YCK1YHR135C RRP5Q05022 1729 aaKnown RBP7.91□□□□□ -1.14
YCK1YHR135C XDJ1P39102 459 aa7.91□□□□□ -1.14
YCK1YHR135C THI12P42883 340 aa7.91□□□□□ -1.14
YCK1YHR135C THI5P43534 340 aa7.91□□□□□ -1.14
YCK1YHR135C THI11P47183 340 aa7.91□□□□□ -1.14
YCK1YHR135C THI13Q07748 340 aa7.91□□□□□ -1.14
YCK1YHR135C AUS1Q08409 1394 aa7.9□□□□□ -1.14
YCK1YHR135C LEU2P04173 364 aaPredicted RBP7.89□□□□□ -1.15
YCK1YHR135C NOP2P40991 618 aaKnown RBP7.89□□□□□ -1.15
YCK1YHR135C TFB4Q12004 338 aa7.89□□□□□ -1.15
YCK1YHR135C ADE6P38972 1358 aaKnown RBP7.89□□□□□ -1.15
YCK1YHR135C YMR196WQ04336 1088 aa7.89□□□□□ -1.15
YCK1YHR135C HIM1Q06674 414 aa7.89□□□□□ -1.15
YCK1YHR135C MTR4P47047 1073 aaKnown RBP7.88□□□□□ -1.15
YCK1YHR135C RPS24AP0CX31 135 aaKnown RBP7.87□□□□□ -1.15
YCK1YHR135C RPS24BP0CX32 135 aaKnown RBP7.87□□□□□ -1.15
YCK1YHR135C KAR2P16474 682 aaKnown RBP7.87□□□□□ -1.15
YCK1YHR135C PDI1P17967 522 aaKnown RBP7.87□□□□□ -1.15
YCK1YHR135C SPB4P25808 606 aaPredicted RBP7.87□□□□□ -1.15
YCK1YHR135C RRP46P53256 223 aaPredicted RBP7.87□□□□□ -1.15
YCK1YHR135C URB1P34241 1764 aaKnown RBP7.87□□□□□ -1.15
YCK1YHR135C FKS3Q04952 1785 aa7.86□□□□□ -1.15
YCK1YHR135C CSE4P36012 229 aa7.86□□□□□ -1.15
YCK1YHR135C FUN12P39730 1002 aaKnown RBP7.86□□□□□ -1.15
YCK1YHR135C YDL144CQ07589 356 aa7.86□□□□□ -1.15
YCK1YHR135C MAM3Q12296 706 aa7.86□□□□□ -1.15
YCK1YHR135C YRF1-2P40105 1681 aa7.86□□□□□ -1.15
YCK1YHR135C GAP1P19145 602 aaPredicted RBP7.85□□□□□ -1.15
YCK1YHR135C DSF2P38213 736 aa7.85□□□□□ -1.15
YCK1YHR135C ORC6P38826 435 aa7.85□□□□□ -1.15
YCK1YHR135C TAP42Q04372 366 aa7.85□□□□□ -1.15
YCK1YHR135C MPP10P47083 593 aaKnown RBP7.85□□□□□ -1.15
YCK1YHR135C GAS4Q08271 471 aa7.84□□□□□ -1.15
YCK1YHR135C RTF1P53064 558 aa7.83□□□□□ -1.16
YCK1YHR135C RTR1P40084 226 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms