RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	HST3	P53687	447 aa		7.88	□□□□□ -1.15
SPO11	YHL022C	YPL062W	Q02781	134 aa		7.87	□□□□□ -1.15
SPO11	YHL022C	YPR084W	Q06821	456 aa		7.87	□□□□□ -1.15
SPO11	YHL022C	BIO2	P32451	375 aa		7.85	□□□□□ -1.15
SPO11	YHL022C	MRT4	P33201	236 aa	Known RBP	7.85	□□□□□ -1.15
SPO11	YHL022C	APP1	P53933	587 aa		7.85	□□□□□ -1.15
SPO11	YHL022C	YDJ1	P25491	409 aa	Known RBP	7.84	□□□□□ -1.15
SPO11	YHL022C	NAF1	P53919	492 aa	Known RBP	7.84	□□□□□ -1.15
SPO11	YHL022C	GCR2	Q01722	534 aa		7.83	□□□□□ -1.16
SPO11	YHL022C	DMA2	P53924	522 aa		7.82	□□□□□ -1.16
SPO11	YHL022C	GUT2	P32191	649 aa		7.81	□□□□□ -1.16
SPO11	YHL022C	YJL007C	P47080	104 aa		7.81	□□□□□ -1.16
SPO11	YHL022C	YJR115W	P47152	169 aa		7.81	□□□□□ -1.16
SPO11	YHL022C	MSB3	P48566	633 aa	Predicted RBP	7.81	□□□□□ -1.16
SPO11	YHL022C	ISF1	P32488	338 aa		7.8	□□□□□ -1.16
SPO11	YHL022C	EMW1	P42842	904 aa	Known RBP	7.8	□□□□□ -1.16
SPO11	YHL022C	UGA3	P26370	528 aa		7.79	□□□□□ -1.16
SPO11	YHL022C	SPT5	P27692	1063 aa	Known RBP	7.79	□□□□□ -1.16
SPO11	YHL022C	YNL108C	P53929	270 aa		7.79	□□□□□ -1.16
SPO11	YHL022C	STE20	Q03497	939 aa	Known RBP	7.78	□□□□□ -1.16
SPO11	YHL022C	MCM16	Q12262	181 aa		7.78	□□□□□ -1.16
SPO11	YHL022C	YBL086C	P38177	466 aa		7.77	□□□□□ -1.17
SPO11	YHL022C	EMP47	P43555	445 aa		7.77	□□□□□ -1.17
SPO11	YHL022C	HGH1	P48362	394 aa	Known RBP	7.77	□□□□□ -1.17
SPO11	YHL022C	FRA1	Q07825	749 aa		7.77	□□□□□ -1.17
SPO11	YHL022C	SUP45	P12385	437 aa	Known RBP	7.76	□□□□□ -1.17
SPO11	YHL022C	BIM1	P40013	344 aa		7.76	□□□□□ -1.17
SPO11	YHL022C	ENO2	P00925	437 aa	Known RBP	7.75	□□□□□ -1.17
SPO11	YHL022C	ATG32	P40458	529 aa		7.75	□□□□□ -1.17
SPO11	YHL022C	MKS1	P34072	584 aa		7.74	□□□□□ -1.17
SPO11	YHL022C	PTK2	P47116	818 aa	Known RBP	7.74	□□□□□ -1.17
SPO11	YHL022C	MET22	P32179	357 aa		7.73	□□□□□ -1.17
SPO11	YHL022C	DFG5	Q05031	458 aa		7.71	□□□□□ -1.18
SPO11	YHL022C	SRF1	Q12516	437 aa		7.71	□□□□□ -1.18
SPO11	YHL022C	TIF1	P10081	395 aa	Known RBP	7.7	□□□□□ -1.18
SPO11	YHL022C	GAR1	P28007	205 aa	Known RBP	7.7	□□□□□ -1.18
SPO11	YHL022C	RTT106	P40161	455 aa		7.7	□□□□□ -1.18
SPO11	YHL022C	ATG20	Q07528	640 aa		7.7	□□□□□ -1.18
SPO11	YHL022C	FBP26	P32604	452 aa		7.68	□□□□□ -1.18
SPO11	YHL022C	AAD14	P42884	376 aa		7.68	□□□□□ -1.18
SPO11	YHL022C	APL6	P46682	809 aa		7.68	□□□□□ -1.18
SPO11	YHL022C	MRX12	P47084	519 aa		7.68	□□□□□ -1.18
SPO11	YHL022C	RIM21	P48565	533 aa		7.68	□□□□□ -1.18
SPO11	YHL022C	ENV9	Q08651	330 aa		7.68	□□□□□ -1.18
SPO11	YHL022C	YPP1	P46951	817 aa		7.67	□□□□□ -1.18
SPO11	YHL022C	YDR444W	Q04093	687 aa		7.67	□□□□□ -1.18
SPO11	YHL022C	ARG82	P07250	355 aa		7.66	□□□□□ -1.18
SPO11	YHL022C	ISR1	Q06098	443 aa	Known RBP	7.66	□□□□□ -1.18
SPO11	YHL022C	STE6	P12866	1290 aa		7.65	□□□□□ -1.18
SPO11	YHL022C	RTG2	P32608	588 aa	Known RBP	7.65	□□□□□ -1.18
SPO11	YHL022C	RPL34B	P40525	121 aa	Known RBP	7.65	□□□□□ -1.18
SPO11	YHL022C	NUP85	P46673	744 aa		7.65	□□□□□ -1.18
SPO11	YHL022C	ISU1	Q03020	165 aa		7.65	□□□□□ -1.18
SPO11	YHL022C	BDS1	Q08347	646 aa		7.65	□□□□□ -1.18
SPO11	YHL022C	RDS2	P19541	446 aa	Known RBP	7.64	□□□□□ -1.19
SPO11	YHL022C	SOH1	P38633	127 aa		7.64	□□□□□ -1.19
SPO11	YHL022C	LCB5	Q06147	687 aa	Known RBP	7.64	□□□□□ -1.19
SPO11	YHL022C	ENO1	P00924	437 aa	Known RBP	7.63	□□□□□ -1.19
SPO11	YHL022C	DLD1	P32891	587 aa		7.63	□□□□□ -1.19
SPO11	YHL022C	HAL5	P38970	855 aa	Known RBP	7.63	□□□□□ -1.19
SPO11	YHL022C	MRX10	Q05648	414 aa		7.63	□□□□□ -1.19
SPO11	YHL022C	OPT2	Q06593	877 aa		7.62	□□□□□ -1.19
SPO11	YHL022C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.61	□□□□□ -1.19	not detected
SPO11	YHL022C	YPR204W	Q08995	1032 aa		7.61	□□□□□ -1.19
SPO11	YHL022C	LSC2	P53312	427 aa		7.59	□□□□□ -1.19
SPO11	YHL022C	UTP13	Q05946	817 aa	Known RBP	7.59	□□□□□ -1.19
SPO11	YHL022C	ATG3	P40344	310 aa		7.58	□□□□□ -1.2
SPO11	YHL022C	YJR098C	P47139	656 aa		7.58	□□□□□ -1.2
SPO11	YHL022C	YLR346C	Q06139	101 aa		7.58	□□□□□ -1.2
SPO11	YHL022C	MIP1	P15801	1254 aa		7.56	□□□□□ -1.2
SPO11	YHL022C	UTR2	P32623	467 aa		7.56	□□□□□ -1.2
SPO11	YHL022C	SPT2	P06843	333 aa	Predicted RBP	7.55	□□□□□ -1.2
SPO11	YHL022C	DAT1	P13483	248 aa	Known RBP	7.55	□□□□□ -1.2
SPO11	YHL022C	HDA3	Q06623	655 aa		7.55	□□□□□ -1.2
SPO11	YHL022C	WTM2	Q12206	467 aa		7.55	□□□□□ -1.2
SPO11	YHL022C	TCB1	Q12466	1186 aa		7.55	□□□□□ -1.2
SPO11	YHL022C	GLY1	P37303	387 aa	Known RBP	7.54	□□□□□ -1.2
SPO11	YHL022C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.53	□□□□□ -1.2	not detected
SPO11	YHL022C	YDL176W	Q12027	708 aa		7.53	□□□□□ -1.2
SPO11	YHL022C	PEP12	P32854	288 aa		7.52	□□□□□ -1.21
SPO11	YHL022C	DLD3	P39976	496 aa	Known RBP	7.52	□□□□□ -1.21
SPO11	YHL022C	SCW11	P53189	542 aa		7.52	□□□□□ -1.21
SPO11	YHL022C	TY1A-BL	Q12266	440 aa		7.52	□□□□□ -1.21
SPO11	YHL022C	UBP2	Q01476	1272 aa		7.51	□□□□□ -1.21
SPO11	YHL022C	RPP2B	P02400	110 aa	Known RBP	7.5	□□□□□ -1.21
SPO11	YHL022C	TBS1	P38114	1094 aa		7.5	□□□□□ -1.21
SPO11	YHL022C	KTR7	P40504	517 aa		7.5	□□□□□ -1.21
SPO11	YHL022C	CAF120	P53836	1060 aa		7.5	□□□□□ -1.21
SPO11	YHL022C	ACO2	P39533	789 aa		7.49	□□□□□ -1.21
SPO11	YHL022C	UTP7	P40055	554 aa	Known RBP	7.49	□□□□□ -1.21
SPO11	YHL022C	SLX8	P40072	274 aa		7.49	□□□□□ -1.21
SPO11	YHL022C	TTI1	P36097	1038 aa		7.46	□□□□□ -1.22
SPO11	YHL022C	OSH7	P38755	437 aa		7.46	□□□□□ -1.22
SPO11	YHL022C	AIM9	P40053	627 aa	Known RBP	7.46	□□□□□ -1.22
SPO11	YHL022C	YIR007W	P40566	764 aa		7.46	□□□□□ -1.22
SPO11	YHL022C	PDI1	P17967	522 aa	Known RBP	7.45	□□□□□ -1.22
SPO11	YHL022C	SSN3	P39073	555 aa		7.45	□□□□□ -1.22
SPO11	YHL022C	SWI5	P08153	709 aa		7.43	□□□□□ -1.22
SPO11	YHL022C	CPS1	P27614	576 aa		7.43	□□□□□ -1.22
SPO11	YHL022C	DAL1	P32375	460 aa		7.43	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms