RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W PIF1P07271 859 aa4.46□□□□□ -1.7
CAF130YGR134W ESS1P22696 170 aa4.46□□□□□ -1.7
CAF130YGR134W DBP1P24784 617 aaKnown RBP4.46□□□□□ -1.7
CAF130YGR134W FUI1P38196 639 aa4.46□□□□□ -1.7
CAF130YGR134W PHO4P07270 312 aaKnown RBP4.45□□□□□ -1.7
CAF130YGR134W SPT5P27692 1063 aaKnown RBP4.45□□□□□ -1.7
CAF130YGR134W POL5P39985 1022 aaKnown RBP4.45□□□□□ -1.7
CAF130YGR134W GIR2Q03768 265 aaPredicted RBP4.45□□□□□ -1.7
CAF130YGR134W TY1B-DR4Q07793 1604 aa4.45□□□□□ -1.7
CAF130YGR134W GAL2P13181 574 aa4.45□□□□□ -1.7
CAF130YGR134W TFG1P41895 735 aaPredicted RBP4.45□□□□□ -1.7
CAF130YGR134W ROM1P53046 1155 aa4.45□□□□□ -1.7
CAF130YGR134W ECM23Q02710 187 aa4.45□□□□□ -1.7
CAF130YGR134W DAL5P15365 543 aa4.45□□□□□ -1.7
CAF130YGR134W ALD6P54115 500 aaKnown RBP4.45□□□□□ -1.7
CAF130YGR134W HAA1Q12753 694 aaKnown RBP4.45□□□□□ -1.7
CAF130YGR134W SUV3P32580 737 aa4.44□□□□□ -1.7
CAF130YGR134W EMP47P43555 445 aa4.44□□□□□ -1.7
CAF130YGR134W KIP3P53086 805 aaKnown RBP4.44□□□□□ -1.7
CAF130YGR134W ITC1P53125 1264 aa4.44□□□□□ -1.7
CAF130YGR134W TGL2P54857 326 aa4.44□□□□□ -1.7
CAF130YGR134W SPR28Q04921 423 aa4.44□□□□□ -1.7
CAF130YGR134W VPS24P36095 224 aaKnown RBP4.44□□□□□ -1.7
CAF130YGR134W MPE1P35728 441 aaKnown RBP4.44□□□□□ -1.7
CAF130YGR134W HOS4P40480 1083 aa4.44□□□□□ -1.7
CAF130YGR134W RPL34BP40525 121 aaKnown RBP4.44□□□□□ -1.7
CAF130YGR134W RPS0BP46654 252 aaKnown RBP4.44□□□□□ -1.7
CAF130YGR134W ILV3P39522 585 aaKnown RBP4.43□□□□□ -1.7
CAF130YGR134W ACF4P47129 309 aa4.43□□□□□ -1.7
CAF130YGR134W PEX8P53248 589 aa4.43□□□□□ -1.7
CAF130YGR134W YFR006WP43590 535 aa4.43□□□□□ -1.7
CAF130YGR134W TY4A-JP47023 414 aa4.43□□□□□ -1.7
CAF130YGR134W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CAF130YGR134W YPR084WQ06821 456 aa4.43□□□□□ -1.7
CAF130YGR134W FAF1P40546 346 aaPredicted RBP4.42□□□□□ -1.7
CAF130YGR134W JIP5Q06214 492 aaPredicted RBP4.42□□□□□ -1.7
CAF130YGR134W YOR378WQ08902 515 aa4.42□□□□□ -1.7
CAF130YGR134W NKP1Q12493 238 aa4.42□□□□□ -1.7
CAF130YGR134W PWP2P25635 923 aaKnown RBP4.42□□□□□ -1.7
CAF130YGR134W SEC6P32844 805 aa4.42□□□□□ -1.7
CAF130YGR134W DAK2P43550 591 aa4.42□□□□□ -1.7
CAF130YGR134W YJL049WP47048 450 aa4.42□□□□□ -1.7
CAF130YGR134W YGL081WP53156 320 aa4.42□□□□□ -1.7
CAF130YGR134W RKM3P38222 552 aa4.41□□□□□ -1.7
CAF130YGR134W NAF1P53919 492 aaKnown RBP4.41□□□□□ -1.7
CAF130YGR134W PKH3Q03306 898 aaPredicted RBP4.41□□□□□ -1.7
CAF130YGR134W KAR5Q04746 504 aa4.41□□□□□ -1.7
CAF130YGR134W DUT1P33317 147 aa4.41□□□□□ -1.7
CAF130YGR134W GDE1Q02979 1223 aa4.41□□□□□ -1.7
CAF130YGR134W MMP1Q12372 583 aa4.41□□□□□ -1.7
CAF130YGR134W SKI3P17883 1432 aaKnown RBP4.41□□□□□ -1.7
CAF130YGR134W STI1P15705 589 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
CAF130YGR134W GRS1P38088 690 aaKnown RBP4.4□□□□□ -1.7
CAF130YGR134W MNN1P39106 762 aa4.4□□□□□ -1.7
CAF130YGR134W PPG1P32838 368 aa4.4□□□□□ -1.71
CAF130YGR134W PNP1Q05788 311 aa4.4□□□□□ -1.71
CAF130YGR134W APC11Q12157 165 aa4.4□□□□□ -1.71
CAF130YGR134W LSO1Q3E827 93 aa4.4□□□□□ -1.71
CAF130YGR134W MIP1P15801 1254 aa4.39□□□□□ -1.71
CAF130YGR134W MCM2P29469 868 aa4.39□□□□□ -1.71
CAF130YGR134W GUT1P32190 709 aa4.39□□□□□ -1.71
CAF130YGR134W SRP40P32583 406 aaPredicted RBP4.39□□□□□ -1.71
CAF130YGR134W QDR1P40475 563 aa4.39□□□□□ -1.71
CAF130YGR134W NOP2P40991 618 aaKnown RBP4.39□□□□□ -1.71
CAF130YGR134W ESF1Q06344 628 aaKnown RBP4.39□□□□□ -1.71
CAF130YGR134W MCM16Q12262 181 aa4.39□□□□□ -1.71
CAF130YGR134W ACS2P52910 683 aaKnown RBP4.39□□□□□ -1.71
CAF130YGR134W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
CAF130YGR134W POB3Q04636 552 aaKnown RBP4.39□□□□□ -1.71
CAF130YGR134W THS1P04801 734 aaKnown RBP4.39□□□□□ -1.71
CAF130YGR134W YKL091CP33324 310 aaKnown RBP4.39□□□□□ -1.71
CAF130YGR134W UBX7P38349 436 aa4.39□□□□□ -1.71
CAF130YGR134W AIM21P40563 679 aa4.39□□□□□ -1.71
CAF130YGR134W SRS2P12954 1174 aa4.38□□□□□ -1.71
CAF130YGR134W YGR053CP53234 283 aa4.38□□□□□ -1.71
CAF130YGR134W YNR029CP53729 429 aaKnown RBP4.38□□□□□ -1.71
CAF130YGR134W GRX3Q03835 250 aa4.38□□□□□ -1.71
CAF130YGR134W TMA64Q04600 565 aaKnown RBP4.38□□□□□ -1.71
CAF130YGR134W VMA1P17255 1071 aaKnown RBP4.38□□□□□ -1.71
CAF130YGR134W NSR1P27476 414 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
CAF130YGR134W CLB5P30283 435 aa4.38□□□□□ -1.71
CAF130YGR134W DPS1P04802 557 aaKnown RBP4.37□□□□□ -1.71
CAF130YGR134W RAD54P32863 898 aa4.37□□□□□ -1.71
CAF130YGR134W FOL1P53848 824 aa4.37□□□□□ -1.71
CAF130YGR134W COG4Q06096 861 aa4.37□□□□□ -1.71
CAF130YGR134W HIF1Q12373 385 aa4.37□□□□□ -1.71
CAF130YGR134W MNN4P36044 1178 aa4.37□□□□□ -1.71
CAF130YGR134W MAL11P53048 616 aa4.37□□□□□ -1.71
CAF130YGR134W TAF13P11747 167 aa4.37□□□□□ -1.71
CAF130YGR134W CYC8P14922 966 aa4.37□□□□□ -1.71
CAF130YGR134W HUL5P53119 910 aa4.37□□□□□ -1.71
CAF130YGR134W SAM3Q08986 587 aa4.37□□□□□ -1.71
CAF130YGR134W CHD1P32657 1468 aa4.37□□□□□ -1.71
CAF130YGR134W TIM23P32897 222 aa4.36□□□□□ -1.71
CAF130YGR134W GPG1P53130 126 aa4.36□□□□□ -1.71
CAF130YGR134W RMD1Q03441 430 aa4.36□□□□□ -1.71
CAF130YGR134W MRPL32P25348 183 aa4.36□□□□□ -1.71
CAF130YGR134W GRX1P25373 110 aaKnown RBP4.36□□□□□ -1.71
CAF130YGR134W PHO87P25360 923 aa4.36□□□□□ -1.71
CAF130YGR134W YEN1P40028 759 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms