RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL28	YGL103W	YPP1	P46951	817 aa		5.9	□□□□□ -1.46
RPL28	YGL103W	YGL081W	P53156	320 aa		5.9	□□□□□ -1.46
RPL28	YGL103W	CTR9	P89105	1077 aa		5.9	□□□□□ -1.46
RPL28	YGL103W	RPO41	P13433	1351 aa	Known RBP	5.9	□□□□□ -1.47
RPL28	YGL103W	DPS1	P04802	557 aa	Known RBP	5.89	□□□□□ -1.47
RPL28	YGL103W	KNS1	P32350	737 aa	Predicted RBP	5.89	□□□□□ -1.47
RPL28	YGL103W	DLD1	P32891	587 aa		5.89	□□□□□ -1.47
RPL28	YGL103W	RFC1	P38630	861 aa	Known RBP	5.89	□□□□□ -1.47
RPL28	YGL103W	GYP7	P48365	746 aa		5.89	□□□□□ -1.47
RPL28	YGL103W	AIM44	Q99299	758 aa		5.89	□□□□□ -1.47
RPL28	YGL103W	RPS24A	P0CX31	135 aa	Known RBP	5.88	□□□□□ -1.47
RPL28	YGL103W	RPS24B	P0CX32	135 aa	Known RBP	5.88	□□□□□ -1.47
RPL28	YGL103W	AKL1	P38080	1108 aa	Known RBP	5.88	□□□□□ -1.47
RPL28	YGL103W	ILV3	P39522	585 aa	Known RBP	5.88	□□□□□ -1.47
RPL28	YGL103W	ZDS1	P50111	915 aa	Known RBP	5.88	□□□□□ -1.47
RPL28	YGL103W	DSD1	P53095	428 aa		5.88	□□□□□ -1.47
RPL28	YGL103W	RSC1	P53236	928 aa		5.88	□□□□□ -1.47
RPL28	YGL103W	SPO1	P53541	631 aa		5.88	□□□□□ -1.47
RPL28	YGL103W	NUP145	P49687	1317 aa		5.88	□□□□□ -1.47
RPL28	YGL103W	QCR6	P00127	147 aa		5.87	□□□□□ -1.47
RPL28	YGL103W	CPS1	P27614	576 aa		5.87	□□□□□ -1.47
RPL28	YGL103W	CSI1	Q04368	295 aa		5.87	□□□□□ -1.47
RPL28	YGL103W	LCD1	Q04377	747 aa		5.87	□□□□□ -1.47
RPL28	YGL103W	ITT1	Q04638	464 aa		5.87	□□□□□ -1.47
RPL28	YGL103W	NOP58	Q12499	511 aa	Known RBP	5.87	□□□□□ -1.47
RPL28	YGL103W	RPL17A	P05740	184 aa	Known RBP	5.86	□□□□□ -1.47
RPL28	YGL103W	RPL17B	P46990	184 aa	Known RBP	5.86	□□□□□ -1.47
RPL28	YGL103W	GCR2	Q01722	534 aa		5.86	□□□□□ -1.47
RPL28	YGL103W	HAP5	Q02516	242 aa		5.86	□□□□□ -1.47
RPL28	YGL103W	SRT1	Q03175	343 aa		5.86	□□□□□ -1.47
RPL28	YGL103W	ESC2	Q06340	456 aa		5.86	□□□□□ -1.47
RPL28	YGL103W	NOP8	Q08287	484 aa	Predicted RBP	5.86	□□□□□ -1.47
RPL28	YGL103W	BUD31	P25337	157 aa	Predicted RBP	5.85	□□□□□ -1.47
RPL28	YGL103W	BRN1	P38170	754 aa		5.85	□□□□□ -1.47
RPL28	YGL103W	MAM1	P40065	302 aa		5.85	□□□□□ -1.47
RPL28	YGL103W	MDG1	P53885	366 aa		5.85	□□□□□ -1.47
RPL28	YGL103W	YNL050C	P53952	270 aa		5.85	□□□□□ -1.47
RPL28	YGL103W	RNR2	P09938	399 aa	Known RBP	5.84	□□□□□ -1.47
RPL28	YGL103W	BDP1	P46678	594 aa		5.84	□□□□□ -1.47
RPL28	YGL103W	NPA3	P47122	385 aa		5.84	□□□□□ -1.47
RPL28	YGL103W	VPS20	Q04272	221 aa		5.84	□□□□□ -1.47
RPL28	YGL103W	VAS1	P07806	1104 aa	Known RBP	5.83	□□□□□ -1.48
RPL28	YGL103W	BIK1	P11709	440 aa		5.83	□□□□□ -1.48
RPL28	YGL103W	MIC60	P36112	540 aa		5.83	□□□□□ -1.48
RPL28	YGL103W	HXT13	P39924	564 aa		5.83	□□□□□ -1.48
RPL28	YGL103W	KRI1	P42846	591 aa	Known RBP	5.83	□□□□□ -1.48
RPL28	YGL103W	PIL1	P53252	339 aa	Known RBP	5.83	□□□□□ -1.48
RPL28	YGL103W	RKM3	P38222	552 aa		5.82	□□□□□ -1.48
RPL28	YGL103W	BDH2	P39713	417 aa		5.82	□□□□□ -1.48
RPL28	YGL103W	RVS167	P39743	482 aa	Known RBP	5.82	□□□□□ -1.48
RPL28	YGL103W	RSM25	P40496	264 aa		5.82	□□□□□ -1.48
RPL28	YGL103W	HST1	P53685	503 aa		5.82	□□□□□ -1.48
RPL28	YGL103W	YNR029C	P53729	429 aa	Known RBP	5.82	□□□□□ -1.48
RPL28	YGL103W	BMS1	Q08965	1183 aa	Known RBP	5.82	□□□□□ -1.48
RPL28	YGL103W	USO1	P25386	1790 aa		5.82	□□□□□ -1.48
RPL28	YGL103W	RPN12	P32496	274 aa		5.81	□□□□□ -1.48
RPL28	YGL103W	NTH2	P35172	780 aa		5.81	□□□□□ -1.48
RPL28	YGL103W	TPM2	P40414	161 aa		5.81	□□□□□ -1.48
RPL28	YGL103W	HXT17	P53631	564 aa		5.81	□□□□□ -1.48
RPL28	YGL103W	ROM2	P51862	1356 aa	Known RBP	5.8	□□□□□ -1.48
RPL28	YGL103W	COQ4	O13525	335 aa		5.8	□□□□□ -1.48
RPL28	YGL103W	RPS19A	P07280	144 aa	Known RBP	5.8	□□□□□ -1.48
RPL28	YGL103W	RPS19B	P07281	144 aa	Predicted RBP	5.8	□□□□□ -1.48
RPL28	YGL103W	KEX1	P09620	729 aa		5.8	□□□□□ -1.48
RPL28	YGL103W	MCM2	P29469	868 aa		5.8	□□□□□ -1.48
RPL28	YGL103W	HSP104	P31539	908 aa	Known RBP	5.8	□□□□□ -1.48
RPL28	YGL103W	RAD24	P32641	659 aa		5.8	□□□□□ -1.48
RPL28	YGL103W	AOS1	Q06624	347 aa		5.8	□□□□□ -1.48
RPL28	YGL103W	DID4	P36108	232 aa		5.79	□□□□□ -1.48
RPL28	YGL103W	CIR1	P42940	261 aa		5.79	□□□□□ -1.48
RPL28	YGL103W	PRP43	P53131	767 aa	Known RBP	5.79	□□□□□ -1.48
RPL28	YGL103W	YGR122W	P53272	402 aa		5.79	□□□□□ -1.48
RPL28	YGL103W	HRQ1	Q05549	1077 aa		5.79	□□□□□ -1.48
RPL28	YGL103W	APC11	Q12157	165 aa		5.79	□□□□□ -1.48
RPL28	YGL103W	NSE3	Q05541	303 aa		5.78	□□□□□ -1.48
RPL28	YGL103W	FPR4	Q06205	392 aa	Predicted RBP	5.78	□□□□□ -1.48
RPL28	YGL103W	LYS2	P07702	1392 aa		5.78	□□□□□ -1.48
RPL28	YGL103W	ADE6	P38972	1358 aa	Known RBP	5.78	□□□□□ -1.48
RPL28	YGL103W	CDC16	P09798	840 aa		5.77	□□□□□ -1.49
RPL28	YGL103W	MRP7	P12687	371 aa		5.77	□□□□□ -1.49
RPL28	YGL103W	PEX14	P53112	341 aa		5.77	□□□□□ -1.49
RPL28	YGL103W	RMD1	Q03441	430 aa		5.77	□□□□□ -1.49
RPL28	YGL103W	CYC8	P14922	966 aa		5.76	□□□□□ -1.49
RPL28	YGL103W	SWC3	P31376	625 aa		5.76	□□□□□ -1.49
RPL28	YGL103W	GCD7	P32502	381 aa	Predicted RBP	5.76	□□□□□ -1.49
RPL28	YGL103W	MFT1	P33441	392 aa	Known RBP	5.76	□□□□□ -1.49
RPL28	YGL103W	CWH41	P53008	833 aa		5.76	□□□□□ -1.49
RPL28	YGL103W	PEX19	Q07418	342 aa		5.76	□□□□□ -1.49
RPL28	YGL103W	NCB2	Q92317	146 aa		5.76	□□□□□ -1.49
RPL28	YGL103W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.75	□□□□□ -1.49
RPL28	YGL103W	TRL1	P09880	827 aa	Known RBP	5.75	□□□□□ -1.49
RPL28	YGL103W	RPL19A	P0CX82	189 aa	Known RBP	5.75	□□□□□ -1.49
RPL28	YGL103W	RPL19B	P0CX83	189 aa	Predicted RBP	5.75	□□□□□ -1.49
RPL28	YGL103W	UGA3	P26370	528 aa		5.75	□□□□□ -1.49
RPL28	YGL103W	HYR1	P40581	163 aa	Known RBP	5.75	□□□□□ -1.49
RPL28	YGL103W	MAK10	Q02197	733 aa		5.75	□□□□□ -1.49
RPL28	YGL103W	HOS3	Q02959	697 aa	Known RBP	5.75	□□□□□ -1.49
RPL28	YGL103W	PDR18	P53756	1333 aa		5.74	□□□□□ -1.49
RPL28	YGL103W	SES1	P07284	462 aa	Known RBP	5.74	□□□□□ -1.49
RPL28	YGL103W	RAD4	P14736	754 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms