RNA–Protein interactions for RNA: YFR013W

IOC3, Transcript of Subunit of the Isw1a complex, yeast

Gene IOC3, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC3	YFR013W	YPP1	P46951	817 aa		4.24	□□□□□ -1.73
IOC3	YFR013W	ALR1	Q08269	859 aa		4.24	□□□□□ -1.73
IOC3	YFR013W	PAT1	P25644	796 aa	Known RBP	4.22	□□□□□ -1.73
IOC3	YFR013W	RDS2	P19541	446 aa	Known RBP	4.22	□□□□□ -1.73
IOC3	YFR013W	TPD3	P31383	635 aa		4.22	□□□□□ -1.73
IOC3	YFR013W	FIG4	P42837	879 aa		4.22	□□□□□ -1.73
IOC3	YFR013W	YPR084W	Q06821	456 aa		4.22	□□□□□ -1.73
IOC3	YFR013W	KXD1	P53158	218 aa		4.21	□□□□□ -1.73
IOC3	YFR013W	SAS4	Q04003	481 aa		4.21	□□□□□ -1.73
IOC3	YFR013W	MOD5	P07884	428 aa		4.21	□□□□□ -1.74
IOC3	YFR013W	TEC1	P18412	486 aa		4.21	□□□□□ -1.74
IOC3	YFR013W	PEP12	P32854	288 aa		4.21	□□□□□ -1.74
IOC3	YFR013W	GEF1	P37020	779 aa		4.21	□□□□□ -1.74
IOC3	YFR013W	HXT10	P43581	546 aa		4.21	□□□□□ -1.74
IOC3	YFR013W	NOB1	Q08444	459 aa	Known RBP	4.21	□□□□□ -1.74
IOC3	YFR013W	SPT16	P32558	1035 aa	Known RBP	4.2	□□□□□ -1.74
IOC3	YFR013W	SUB1	P54000	292 aa	Known RBP	4.2	□□□□□ -1.74
IOC3	YFR013W	FRA1	Q07825	749 aa		4.2	□□□□□ -1.74
IOC3	YFR013W	ISF1	P32488	338 aa		4.2	□□□□□ -1.74
IOC3	YFR013W	RRD1	P40454	393 aa	Known RBP	4.2	□□□□□ -1.74
IOC3	YFR013W	EMP47	P43555	445 aa		4.2	□□□□□ -1.74
IOC3	YFR013W	ATG36	P46983	293 aa		4.2	□□□□□ -1.74
IOC3	YFR013W	PUP1	P25043	261 aa		4.19	□□□□□ -1.74
IOC3	YFR013W	GYP1	Q08484	637 aa		4.19	□□□□□ -1.74
IOC3	YFR013W	GUT2	P32191	649 aa		4.19	□□□□□ -1.74
IOC3	YFR013W	VAC17	P25591	423 aa		4.18	□□□□□ -1.74
IOC3	YFR013W	EBP2	P36049	427 aa	Known RBP	4.18	□□□□□ -1.74
IOC3	YFR013W	APL6	P46682	809 aa		4.18	□□□□□ -1.74
IOC3	YFR013W	MRX12	P47084	519 aa		4.18	□□□□□ -1.74
IOC3	YFR013W	NOP7	P53261	605 aa	Known RBP	4.18	□□□□□ -1.74
IOC3	YFR013W	TGL4	P36165	910 aa		4.18	□□□□□ -1.74
IOC3	YFR013W	VPS72	Q03388	795 aa		4.18	□□□□□ -1.74
IOC3	YFR013W	STE20	Q03497	939 aa	Known RBP	4.18	□□□□□ -1.74
IOC3	YFR013W	SDH2	P21801	266 aa		4.17	□□□□□ -1.74
IOC3	YFR013W	ASF1	P32447	279 aa		4.17	□□□□□ -1.74
IOC3	YFR013W	SWE1	P32944	819 aa		4.17	□□□□□ -1.74
IOC3	YFR013W	YML083C	Q04526	418 aa		4.17	□□□□□ -1.74
IOC3	YFR013W	VRP1	P37370	817 aa		4.16	□□□□□ -1.74
IOC3	YFR013W	SLX8	P40072	274 aa		4.16	□□□□□ -1.74
IOC3	YFR013W	MRF1	P30775	413 aa	Predicted RBP	4.16	□□□□□ -1.74
IOC3	YFR013W	CAB3	P36076	571 aa		4.16	□□□□□ -1.74
IOC3	YFR013W	UTP13	Q05946	817 aa	Known RBP	4.16	□□□□□ -1.74
IOC3	YFR013W	ENV9	Q08651	330 aa		4.16	□□□□□ -1.74
IOC3	YFR013W	NUG1	P40010	520 aa	Known RBP	4.15	□□□□□ -1.75
IOC3	YFR013W	ATG3	P40344	310 aa		4.15	□□□□□ -1.75
IOC3	YFR013W	MDG1	P53885	366 aa		4.14	□□□□□ -1.75
IOC3	YFR013W	GIN4	Q12263	1142 aa		4.14	□□□□□ -1.75
IOC3	YFR013W	KTR7	P40504	517 aa		4.13	□□□□□ -1.75
IOC3	YFR013W	BDP1	P46678	594 aa		4.13	□□□□□ -1.75
IOC3	YFR013W	RPL34A	P87262	121 aa	Predicted RBP	4.13	□□□□□ -1.75
IOC3	YFR013W	GAL2	P13181	574 aa		4.13	□□□□□ -1.75
IOC3	YFR013W	SOH1	P38633	127 aa		4.13	□□□□□ -1.75
IOC3	YFR013W	BCK2	P33306	851 aa		4.12	□□□□□ -1.75
IOC3	YFR013W	PAM1	P37304	830 aa	Known RBP	4.12	□□□□□ -1.75
IOC3	YFR013W	CST6	P40535	587 aa		4.12	□□□□□ -1.75
IOC3	YFR013W	ECM23	Q02710	187 aa		4.12	□□□□□ -1.75
IOC3	YFR013W	ITT1	Q04638	464 aa		4.12	□□□□□ -1.75
IOC3	YFR013W	IXR1	P33417	597 aa		4.12	□□□□□ -1.75
IOC3	YFR013W	PUS5	Q06244	254 aa		4.11	□□□□□ -1.75
IOC3	YFR013W	PHO87	P25360	923 aa		4.11	□□□□□ -1.75
IOC3	YFR013W	CDC3	P32457	520 aa	Known RBP	4.11	□□□□□ -1.75
IOC3	YFR013W	HAL5	P38970	855 aa	Known RBP	4.11	□□□□□ -1.75
IOC3	YFR013W	FAR11	P53917	953 aa		4.11	□□□□□ -1.75
IOC3	YFR013W	KIP2	P28743	706 aa		4.1	□□□□□ -1.75
IOC3	YFR013W	EMW1	P42842	904 aa	Known RBP	4.1	□□□□□ -1.75
IOC3	YFR013W	RTS3	P53289	263 aa		4.1	□□□□□ -1.75
IOC3	YFR013W	SYH1	Q02875	849 aa	Known RBP	4.1	□□□□□ -1.75
IOC3	YFR013W	UBX7	P38349	436 aa		4.1	□□□□□ -1.75
IOC3	YFR013W	ACS2	P52910	683 aa	Known RBP	4.1	□□□□□ -1.75
IOC3	YFR013W	FRK1	Q03002	865 aa	Predicted RBP	4.1	□□□□□ -1.75
IOC3	YFR013W	ISR1	Q06098	443 aa	Known RBP	4.1	□□□□□ -1.75
IOC3	YFR013W	YEL077C	Q3E7X8	1277 aa		4.1	□□□□□ -1.75
IOC3	YFR013W	XDJ1	P39102	459 aa		4.09	□□□□□ -1.75
IOC3	YFR013W	ATG20	Q07528	640 aa		4.09	□□□□□ -1.75
IOC3	YFR013W	HAP4	P14064	554 aa		4.09	□□□□□ -1.76
IOC3	YFR013W	SPC42	P36094	363 aa		4.09	□□□□□ -1.76
IOC3	YFR013W	BRN1	P38170	754 aa		4.09	□□□□□ -1.76
IOC3	YFR013W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
IOC3	YFR013W	TSC13	Q99190	310 aa		4.09	□□□□□ -1.76
IOC3	YFR013W	OSW7	P43611	510 aa		4.08	□□□□□ -1.76
IOC3	YFR013W	ROM1	P53046	1155 aa		4.08	□□□□□ -1.76
IOC3	YFR013W	MRT4	P33201	236 aa	Known RBP	4.07	□□□□□ -1.76
IOC3	YFR013W	TPO2	P53283	614 aa		4.07	□□□□□ -1.76
IOC3	YFR013W	APP1	P53933	587 aa		4.07	□□□□□ -1.76
IOC3	YFR013W	GAS4	Q08271	471 aa		4.07	□□□□□ -1.76
IOC3	YFR013W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
IOC3	YFR013W	YTA7	P40340	1379 aa		4.07	□□□□□ -1.76
IOC3	YFR013W	HDA3	Q06623	655 aa		4.07	□□□□□ -1.76
IOC3	YFR013W	MIP1	P15801	1254 aa		4.06	□□□□□ -1.76
IOC3	YFR013W	PDI1	P17967	522 aa	Known RBP	4.06	□□□□□ -1.76
IOC3	YFR013W	AMS1	P22855	1083 aa		4.06	□□□□□ -1.76
IOC3	YFR013W	TOA1	P32773	286 aa		4.06	□□□□□ -1.76
IOC3	YFR013W	SSF1	P38789	453 aa	Predicted RBP	4.06	□□□□□ -1.76
IOC3	YFR013W	AIM9	P40053	627 aa	Known RBP	4.06	□□□□□ -1.76
IOC3	YFR013W	DOS2	P54858	310 aa		4.06	□□□□□ -1.76
IOC3	YFR013W	CWC15	Q03772	175 aa	Known RBP	4.06	□□□□□ -1.76
IOC3	YFR013W	TPS3	P38426	1054 aa	Known RBP	4.06	□□□□□ -1.76
IOC3	YFR013W	YFL034W	P43564	1073 aa		4.06	□□□□□ -1.76
IOC3	YFR013W	PUF6	Q04373	656 aa	Known RBP	4.06	□□□□□ -1.76
IOC3	YFR013W	SPT2	P06843	333 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms