RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	SPE2	P21182	396 aa		4.87	□□□□□ -1.63
RAD4	YER162C	GRE2	Q12068	342 aa	Known RBP	4.87	□□□□□ -1.63
RAD4	YER162C	RPS9B	P05755	195 aa	Known RBP	4.86	□□□□□ -1.63
RAD4	YER162C	FPK1	P53739	893 aa		4.86	□□□□□ -1.63
RAD4	YER162C	RPO41	P13433	1351 aa	Known RBP	4.86	□□□□□ -1.63
RAD4	YER162C	SQS1	P53866	767 aa	Known RBP	4.86	□□□□□ -1.63
RAD4	YER162C	ADE16	P54113	591 aa	Known RBP	4.86	□□□□□ -1.63
RAD4	YER162C	GRX1	P25373	110 aa	Known RBP	4.85	□□□□□ -1.63
RAD4	YER162C	RCR1	P38212	213 aa		4.85	□□□□□ -1.63
RAD4	YER162C	RRT14	P40470	206 aa		4.85	□□□□□ -1.63
RAD4	YER162C	DUS1	P53759	423 aa	Known RBP	4.85	□□□□□ -1.63
RAD4	YER162C	FAP1	P53971	965 aa		4.84	□□□□□ -1.63
RAD4	YER162C	HPC2	Q01448	625 aa		4.83	□□□□□ -1.64
RAD4	YER162C	NYV1	Q12255	253 aa		4.83	□□□□□ -1.64
RAD4	YER162C	YML133C	Q03099	1374 aa		4.83	□□□□□ -1.64
RAD4	YER162C	YLL067C	Q07888	1374 aa		4.83	□□□□□ -1.64
RAD4	YER162C	TOP1	P04786	769 aa		4.82	□□□□□ -1.64
RAD4	YER162C	ETP1	P38748	585 aa	Known RBP	4.82	□□□□□ -1.64
RAD4	YER162C	ATG13	Q06628	738 aa		4.82	□□□□□ -1.64
RAD4	YER162C	CWH41	P53008	833 aa		4.81	□□□□□ -1.64
RAD4	YER162C	RPN1	P38764	993 aa	Known RBP	4.81	□□□□□ -1.64
RAD4	YER162C	SNU71	P53207	620 aa	Known RBP	4.81	□□□□□ -1.64
RAD4	YER162C	SCT1	P32784	759 aa		4.8	□□□□□ -1.64
RAD4	YER162C	PFF1	P38244	976 aa		4.8	□□□□□ -1.64
RAD4	YER162C	KIP3	P53086	805 aa	Known RBP	4.8	□□□□□ -1.64
RAD4	YER162C	NST1	P53935	1240 aa		4.8	□□□□□ -1.64
RAD4	YER162C	RIX7	Q07844	837 aa	Known RBP	4.8	□□□□□ -1.64
RAD4	YER162C	OSM1	P21375	501 aa	Known RBP	4.79	□□□□□ -1.64
RAD4	YER162C	INP54	Q08227	384 aa	Known RBP	4.79	□□□□□ -1.64
RAD4	YER162C	DPS1	P04802	557 aa	Known RBP	4.78	□□□□□ -1.64
RAD4	YER162C	RET1	P22276	1149 aa	Known RBP	4.78	□□□□□ -1.64
RAD4	YER162C	ATG20	Q07528	640 aa		4.78	□□□□□ -1.64
RAD4	YER162C	YLR278C	Q05854	1341 aa		4.78	□□□□□ -1.64
RAD4	YER162C	SDH2	P21801	266 aa		4.77	□□□□□ -1.65
RAD4	YER162C	RTG2	P32608	588 aa	Known RBP	4.77	□□□□□ -1.65
RAD4	YER162C	SLI15	P38283	698 aa		4.77	□□□□□ -1.65
RAD4	YER162C	SHC1	P39000	512 aa		4.77	□□□□□ -1.65
RAD4	YER162C	MAC1	P35192	417 aa		4.76	□□□□□ -1.65
RAD4	YER162C	RTF1	P53064	558 aa		4.76	□□□□□ -1.65
RAD4	YER162C	SEC3	P33332	1336 aa	Known RBP	4.76	□□□□□ -1.65
RAD4	YER162C	ERO1	Q03103	563 aa		4.76	□□□□□ -1.65
RAD4	YER162C	SRF1	Q12516	437 aa		4.76	□□□□□ -1.65
RAD4	YER162C	PDI1	P17967	522 aa	Known RBP	4.75	□□□□□ -1.65
RAD4	YER162C	GAS4	Q08271	471 aa		4.75	□□□□□ -1.65
RAD4	YER162C	UTP10	P42945	1769 aa	Known RBP	4.74	□□□□□ -1.65
RAD4	YER162C	THS1	P04801	734 aa	Known RBP	4.74	□□□□□ -1.65
RAD4	YER162C	SMY1	P32364	656 aa	Known RBP	4.74	□□□□□ -1.65
RAD4	YER162C	GRX4	P32642	244 aa		4.74	□□□□□ -1.65
RAD4	YER162C	YBP2	P53169	641 aa		4.74	□□□□□ -1.65
RAD4	YER162C	TAP42	Q04372	366 aa		4.74	□□□□□ -1.65
RAD4	YER162C	TYW1	Q08960	810 aa	Known RBP	4.74	□□□□□ -1.65
RAD4	YER162C	FIG2	P25653	1609 aa		4.74	□□□□□ -1.65
RAD4	YER162C	AUS1	Q08409	1394 aa		4.74	□□□□□ -1.65
RAD4	YER162C	FKH1	P40466	484 aa		4.73	□□□□□ -1.65
RAD4	YER162C	TUM1	Q08686	304 aa	Known RBP	4.73	□□□□□ -1.65
RAD4	YER162C	BRL1	P38770	471 aa		4.72	□□□□□ -1.65
RAD4	YER162C	VHR2	P40041	505 aa		4.72	□□□□□ -1.65
RAD4	YER162C	YIL089W	P40500	205 aa		4.72	□□□□□ -1.65
RAD4	YER162C	MDG1	P53885	366 aa		4.72	□□□□□ -1.65
RAD4	YER162C	CTF4	Q01454	927 aa		4.72	□□□□□ -1.65
RAD4	YER162C	NUP145	P49687	1317 aa		4.72	□□□□□ -1.65
RAD4	YER162C	YML020W	Q03722	664 aa		4.72	□□□□□ -1.65
RAD4	YER162C	SIT4	P20604	311 aa		4.71	□□□□□ -1.65
RAD4	YER162C	GRX6	Q12438	231 aa		4.71	□□□□□ -1.65
RAD4	YER162C	ICL1	P28240	557 aa	Predicted RBP	4.71	□□□□□ -1.66
RAD4	YER162C	YKU70	P32807	602 aa		4.71	□□□□□ -1.66
RAD4	YER162C	YKR023W	P36119	530 aa	Known RBP	4.71	□□□□□ -1.66
RAD4	YER162C	RAT1	Q02792	1006 aa	Known RBP	4.71	□□□□□ -1.66
RAD4	YER162C	DIB1	Q06819	143 aa	Predicted RBP	4.71	□□□□□ -1.66
RAD4	YER162C	TIF6	Q12522	245 aa	Known RBP	4.71	□□□□□ -1.66
RAD4	YER162C	MLP1	Q02455	1875 aa	Known RBP	4.71	□□□□□ -1.66
RAD4	YER162C	LPD1	P09624	499 aa	Known RBP	4.7	□□□□□ -1.66
RAD4	YER162C	CTI6	Q08923	506 aa		4.7	□□□□□ -1.66
RAD4	YER162C	GLC3	P32775	704 aa		4.7	□□□□□ -1.66
RAD4	YER162C	PHM7	Q12252	991 aa		4.7	□□□□□ -1.66
RAD4	YER162C	FAS2	P19097	1887 aa	Known RBP	4.7	□□□□□ -1.66
RAD4	YER162C	SIS2	P36024	562 aa		4.69	□□□□□ -1.66
RAD4	YER162C	NCS6	P53088	359 aa		4.69	□□□□□ -1.66
RAD4	YER162C	YFR016C	P43597	1233 aa	Known RBP	4.68	□□□□□ -1.66
RAD4	YER162C	TEA1	P47988	759 aa		4.68	□□□□□ -1.66
RAD4	YER162C	RMT2	Q03305	412 aa		4.68	□□□□□ -1.66
RAD4	YER162C	PIB1	Q06651	286 aa		4.68	□□□□□ -1.66
RAD4	YER162C	IRC3	Q06683	689 aa		4.68	□□□□□ -1.66
RAD4	YER162C	BDF2	Q07442	638 aa		4.68	□□□□□ -1.66
RAD4	YER162C	TIM50	Q02776	476 aa		4.67	□□□□□ -1.66
RAD4	YER162C	PEA2	P40091	420 aa		4.67	□□□□□ -1.66
RAD4	YER162C	ISW2	Q08773	1120 aa		4.67	□□□□□ -1.66
RAD4	YER162C	HVG1	P0CE11	249 aa		4.66	□□□□□ -1.66
RAD4	YER162C	MSM1	P22438	575 aa		4.66	□□□□□ -1.66
RAD4	YER162C	BSD2	P38356	321 aa		4.66	□□□□□ -1.66
RAD4	YER162C	FET4	P40988	552 aa		4.66	□□□□□ -1.66
RAD4	YER162C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
RAD4	YER162C	DSD1	P53095	428 aa		4.66	□□□□□ -1.66
RAD4	YER162C	NOP53	Q12080	455 aa	Known RBP	4.66	□□□□□ -1.66
RAD4	YER162C	PMD1	P32634	1753 aa		4.66	□□□□□ -1.66
RAD4	YER162C	CWC15	Q03772	175 aa	Known RBP	4.65	□□□□□ -1.66
RAD4	YER162C	DPL1	Q05567	589 aa		4.65	□□□□□ -1.66
RAD4	YER162C	HKR1	P41809	1802 aa		4.65	□□□□□ -1.67
RAD4	YER162C	MNN4	P36044	1178 aa		4.65	□□□□□ -1.67
RAD4	YER162C	KRI1	P42846	591 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms