RNA–Protein interactions for RNA: YDR490C

PKH1, Transcript of Serine/threonine protein kinase, yeast

Gene PKH1, Length 2,301 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKH1	YDR490C	TAF8	Q03750	510 aa		4.25	□□□□□ -1.73
PKH1	YDR490C	RTG3	P38165	486 aa		4.24	□□□□□ -1.73
PKH1	YDR490C	PUS5	Q06244	254 aa		4.24	□□□□□ -1.73
PKH1	YDR490C	YDL144C	Q07589	356 aa		4.24	□□□□□ -1.73
PKH1	YDR490C	EAF7	P53911	425 aa	Known RBP	4.24	□□□□□ -1.73
PKH1	YDR490C	YLL066C	Q99208	1374 aa		4.24	□□□□□ -1.73
PKH1	YDR490C	RPP0	P05317	312 aa	Known RBP	4.23	□□□□□ -1.73
PKH1	YDR490C	SPE2	P21182	396 aa		4.23	□□□□□ -1.73
PKH1	YDR490C	SSA4	P22202	642 aa	Known RBP	4.23	□□□□□ -1.73
PKH1	YDR490C	SAP155	P43612	1002 aa		4.23	□□□□□ -1.73
PKH1	YDR490C	SIR4	P11978	1358 aa		4.23	□□□□□ -1.73
PKH1	YDR490C	CTT1	P06115	562 aa		4.22	□□□□□ -1.73
PKH1	YDR490C	TRK1	P12685	1235 aa		4.22	□□□□□ -1.73
PKH1	YDR490C	XKS1	P42826	600 aa		4.22	□□□□□ -1.73
PKH1	YDR490C	UTP22	P53254	1237 aa	Predicted RBP	4.22	□□□□□ -1.73
PKH1	YDR490C	SUI2	P20459	304 aa	Known RBP	4.22	□□□□□ -1.73
PKH1	YDR490C	EAF6	P47128	113 aa		4.22	□□□□□ -1.73
PKH1	YDR490C	MEC3	Q02574	474 aa		4.22	□□□□□ -1.73
PKH1	YDR490C	TOS1	P38288	455 aa		4.21	□□□□□ -1.74
PKH1	YDR490C	MTR4	P47047	1073 aa	Known RBP	4.21	□□□□□ -1.74
PKH1	YDR490C	BUG1	Q12191	341 aa		4.21	□□□□□ -1.74
PKH1	YDR490C	MSB4	Q12317	492 aa		4.21	□□□□□ -1.74
PKH1	YDR490C	YER156C	P40093	338 aa	Known RBP	4.21	□□□□□ -1.74
PKH1	YDR490C	MPP10	P47083	593 aa	Known RBP	4.21	□□□□□ -1.74
PKH1	YDR490C	RAD4	P14736	754 aa		4.2	□□□□□ -1.74
PKH1	YDR490C	CHZ1	P40019	153 aa	Predicted RBP	4.2	□□□□□ -1.74
PKH1	YDR490C	RPS9B	P05755	195 aa	Known RBP	4.19	□□□□□ -1.74
PKH1	YDR490C	SNF7	P39929	240 aa	Known RBP	4.19	□□□□□ -1.74
PKH1	YDR490C	MSN5	P52918	1224 aa		4.19	□□□□□ -1.74
PKH1	YDR490C	POM152	P39685	1337 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	LEU2	P04173	364 aa	Predicted RBP	4.18	□□□□□ -1.74
PKH1	YDR490C	SCT1	P32784	759 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	YKL222C	P35995	705 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	CSE4	P36012	229 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	FKH1	P40466	484 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	AIM44	Q99299	758 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	ERT1	P38140	529 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	YIR014W	P40570	242 aa		4.18	□□□□□ -1.74
PKH1	YDR490C	YRB30	P53107	440 aa	Predicted RBP	4.18	□□□□□ -1.74
PKH1	YDR490C	DJP1	P40564	432 aa		4.17	□□□□□ -1.74
PKH1	YDR490C	FPK1	P53739	893 aa		4.17	□□□□□ -1.74
PKH1	YDR490C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PKH1	YDR490C	DAL5	P15365	543 aa		4.16	□□□□□ -1.74
PKH1	YDR490C	ROX1	P25042	368 aa		4.16	□□□□□ -1.74
PKH1	YDR490C	RRT14	P40470	206 aa		4.16	□□□□□ -1.74
PKH1	YDR490C	SQS1	P53866	767 aa	Known RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	FRK1	Q03002	865 aa	Predicted RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	RAD2	P07276	1031 aa		4.16	□□□□□ -1.74
PKH1	YDR490C	RPS24A	P0CX31	135 aa	Known RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	RPS24B	P0CX32	135 aa	Known RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	PCT1	P13259	424 aa		4.16	□□□□□ -1.74
PKH1	YDR490C	GRX1	P25373	110 aa	Known RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	RTR1	P40084	226 aa	Predicted RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	RRP46	P53256	223 aa	Predicted RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	KIN4	Q01919	800 aa		4.16	□□□□□ -1.74
PKH1	YDR490C	GRE2	Q12068	342 aa	Known RBP	4.16	□□□□□ -1.74
PKH1	YDR490C	DUS1	P53759	423 aa	Known RBP	4.15	□□□□□ -1.74
PKH1	YDR490C	MLP1	Q02455	1875 aa	Known RBP	4.15	□□□□□ -1.75
PKH1	YDR490C	RPO41	P13433	1351 aa	Known RBP	4.15	□□□□□ -1.75
PKH1	YDR490C	TPD3	P31383	635 aa		4.15	□□□□□ -1.75
PKH1	YDR490C	DMA2	P53924	522 aa		4.15	□□□□□ -1.75
PKH1	YDR490C	ADE16	P54113	591 aa	Known RBP	4.15	□□□□□ -1.75
PKH1	YDR490C	HPC2	Q01448	625 aa		4.15	□□□□□ -1.75
PKH1	YDR490C	IOC4	Q04213	475 aa		4.15	□□□□□ -1.75
PKH1	YDR490C	MNN4	P36044	1178 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	ETP1	P38748	585 aa	Known RBP	4.13	□□□□□ -1.75
PKH1	YDR490C	SLN1	P39928	1220 aa	Predicted RBP	4.13	□□□□□ -1.75
PKH1	YDR490C	YIL092W	P40497	633 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	POL32	P47110	350 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	RCR1	P38212	213 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	TCB2	P48231	1178 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	THI22	Q06490	572 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	ATG13	Q06628	738 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	NYV1	Q12255	253 aa		4.13	□□□□□ -1.75
PKH1	YDR490C	UTP10	P42945	1769 aa	Known RBP	4.13	□□□□□ -1.75
PKH1	YDR490C	YML133C	Q03099	1374 aa		4.12	□□□□□ -1.75
PKH1	YDR490C	YLL067C	Q07888	1374 aa		4.12	□□□□□ -1.75
PKH1	YDR490C	VPS24	P36095	224 aa	Known RBP	4.12	□□□□□ -1.75
PKH1	YDR490C	RLF2	Q12495	606 aa		4.12	□□□□□ -1.75
PKH1	YDR490C	KAR2	P16474	682 aa	Known RBP	4.11	□□□□□ -1.75
PKH1	YDR490C	PRD1	P25375	712 aa		4.11	□□□□□ -1.75
PKH1	YDR490C	CWH41	P53008	833 aa		4.11	□□□□□ -1.75
PKH1	YDR490C	PAP2	P53632	584 aa	Known RBP	4.11	□□□□□ -1.75
PKH1	YDR490C	PUF6	Q04373	656 aa	Known RBP	4.11	□□□□□ -1.75
PKH1	YDR490C	FIG2	P25653	1609 aa		4.11	□□□□□ -1.75
PKH1	YDR490C	PFF1	P38244	976 aa		4.11	□□□□□ -1.75
PKH1	YDR490C	MSP1	P28737	362 aa		4.1	□□□□□ -1.75
PKH1	YDR490C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PKH1	YDR490C	UBP10	P53874	792 aa	Predicted RBP	4.1	□□□□□ -1.75
PKH1	YDR490C	HEF3	P53978	1044 aa	Known RBP	4.1	□□□□□ -1.75
PKH1	YDR490C	SDH2	P21801	266 aa		4.1	□□□□□ -1.75
PKH1	YDR490C	ARL1	P38116	183 aa	Known RBP	4.1	□□□□□ -1.75
PKH1	YDR490C	HIM1	Q06674	414 aa		4.1	□□□□□ -1.75
PKH1	YDR490C	RTT109	Q07794	436 aa		4.1	□□□□□ -1.75
PKH1	YDR490C	RIX7	Q07844	837 aa	Known RBP	4.1	□□□□□ -1.75
PKH1	YDR490C	YLR278C	Q05854	1341 aa		4.09	□□□□□ -1.75
PKH1	YDR490C	RET1	P22276	1149 aa	Known RBP	4.09	□□□□□ -1.75
PKH1	YDR490C	RTG2	P32608	588 aa	Known RBP	4.09	□□□□□ -1.75
PKH1	YDR490C	SLI15	P38283	698 aa		4.09	□□□□□ -1.75
PKH1	YDR490C	SRF1	Q12516	437 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms