RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C RTR1P40084 226 aaPredicted RBP4.52□□□□□ -1.69
TRS120YDR407C RSF2P46974 1380 aa4.52□□□□□ -1.69
TRS120YDR407C SLN1P39928 1220 aaPredicted RBP4.51□□□□□ -1.69
TRS120YDR407C YPR148CQ06523 435 aa4.51□□□□□ -1.69
TRS120YDR407C TPD3P31383 635 aa4.51□□□□□ -1.69
TRS120YDR407C PTP3P40048 928 aa4.5□□□□□ -1.69
TRS120YDR407C SRT1Q03175 343 aa4.5□□□□□ -1.69
TRS120YDR407C LEU3P08638 886 aa4.5□□□□□ -1.69
TRS120YDR407C MSP1P28737 362 aa4.5□□□□□ -1.69
TRS120YDR407C MPE1P35728 441 aaKnown RBP4.5□□□□□ -1.69
TRS120YDR407C ORC1P54784 914 aaPredicted RBP4.5□□□□□ -1.69
TRS120YDR407C TRL1P09880 827 aaKnown RBP4.5□□□□□ -1.69
TRS120YDR407C AKL1P38080 1108 aaKnown RBP4.49□□□□□ -1.69
TRS120YDR407C BDH2P39713 417 aa4.49□□□□□ -1.69
TRS120YDR407C AIM44Q99299 758 aa4.49□□□□□ -1.69
TRS120YDR407C NAP1P25293 417 aaKnown RBP4.48□□□□□ -1.69
TRS120YDR407C FLO1P32768 1537 aa4.48□□□□□ -1.69
TRS120YDR407C RIA1P53893 1110 aa4.48□□□□□ -1.69
TRS120YDR407C GCR2Q01722 534 aa4.48□□□□□ -1.69
TRS120YDR407C TRP5P00931 707 aaKnown RBP4.47□□□□□ -1.69
TRS120YDR407C RAD2P07276 1031 aa4.47□□□□□ -1.69
TRS120YDR407C GYP7P48365 746 aa4.47□□□□□ -1.69
TRS120YDR407C SWI1P09547 1314 aa4.47□□□□□ -1.69
TRS120YDR407C KAR2P16474 682 aaKnown RBP4.47□□□□□ -1.69
TRS120YDR407C PXL1P36166 706 aa4.47□□□□□ -1.69
TRS120YDR407C CIR1P42940 261 aa4.47□□□□□ -1.69
TRS120YDR407C TEA1P47988 759 aa4.47□□□□□ -1.69
TRS120YDR407C ECM16Q04217 1267 aaKnown RBP4.47□□□□□ -1.69
TRS120YDR407C MBR1P23493 339 aa4.46□□□□□ -1.69
TRS120YDR407C FUN12P39730 1002 aaKnown RBP4.46□□□□□ -1.69
TRS120YDR407C COQ4O13525 335 aa4.46□□□□□ -1.7
TRS120YDR407C BOI2P39969 1040 aa4.46□□□□□ -1.7
TRS120YDR407C YOL057WQ08225 711 aa4.46□□□□□ -1.7
TRS120YDR407C MAK21Q12176 1025 aaKnown RBP4.46□□□□□ -1.7
TRS120YDR407C AIM9P40053 627 aaKnown RBP4.46□□□□□ -1.7
TRS120YDR407C INP54Q08227 384 aaKnown RBP4.46□□□□□ -1.7
TRS120YDR407C RTF1P53064 558 aa4.46□□□□□ -1.7
TRS120YDR407C YMR196WQ04336 1088 aa4.46□□□□□ -1.7
TRS120YDR407C RPS24AP0CX31 135 aaKnown RBP4.45□□□□□ -1.7
TRS120YDR407C RPS24BP0CX32 135 aaKnown RBP4.45□□□□□ -1.7
TRS120YDR407C ELM1P32801 640 aa4.45□□□□□ -1.7
TRS120YDR407C CSI1Q04368 295 aa4.45□□□□□ -1.7
TRS120YDR407C SLM3Q12093 417 aa4.45□□□□□ -1.7
TRS120YDR407C KTR3P38130 404 aaPredicted RBP4.44□□□□□ -1.7
TRS120YDR407C TCB2P48231 1178 aa4.44□□□□□ -1.7
TRS120YDR407C DAL5P15365 543 aa4.43□□□□□ -1.7
TRS120YDR407C UGA3P26370 528 aa4.43□□□□□ -1.7
TRS120YDR407C SAC3P46674 1301 aa4.43□□□□□ -1.7
TRS120YDR407C HRQ1Q05549 1077 aa4.43□□□□□ -1.7
TRS120YDR407C MTC1P47018 478 aaKnown RBP4.43□□□□□ -1.7
TRS120YDR407C NKP2Q06162 153 aa4.43□□□□□ -1.7
TRS120YDR407C RAD24P32641 659 aa4.42□□□□□ -1.7
TRS120YDR407C VPS24P36095 224 aaKnown RBP4.42□□□□□ -1.7
TRS120YDR407C DLD1P32891 587 aa4.42□□□□□ -1.7
TRS120YDR407C MRX12P47084 519 aa4.42□□□□□ -1.7
TRS120YDR407C YPL150WQ12152 901 aa4.41□□□□□ -1.7
TRS120YDR407C BRN1P38170 754 aa4.41□□□□□ -1.7
TRS120YDR407C EPS1P40557 701 aa4.41□□□□□ -1.7
TRS120YDR407C NPA3P47122 385 aa4.41□□□□□ -1.7
TRS120YDR407C CSE4P36012 229 aa4.4□□□□□ -1.7
TRS120YDR407C RFT1P38206 574 aaPredicted RBP4.4□□□□□ -1.7
TRS120YDR407C ZDS1P50111 915 aaKnown RBP4.4□□□□□ -1.71
TRS120YDR407C HST1P53685 503 aa4.4□□□□□ -1.71
TRS120YDR407C AAP1P37898 856 aaKnown RBP4.4□□□□□ -1.71
TRS120YDR407C RKM3P38222 552 aa4.4□□□□□ -1.71
TRS120YDR407C SSK22P25390 1331 aaPredicted RBP4.39□□□□□ -1.71
TRS120YDR407C KCC4P25389 1037 aa4.39□□□□□ -1.71
TRS120YDR407C ADR1P07248 1323 aa4.39□□□□□ -1.71
TRS120YDR407C MOT1P32333 1867 aa4.39□□□□□ -1.71
TRS120YDR407C CCC2P38995 1004 aa4.39□□□□□ -1.71
TRS120YDR407C DPS1P04802 557 aaKnown RBP4.38□□□□□ -1.71
TRS120YDR407C SRS2P12954 1174 aa4.38□□□□□ -1.71
TRS120YDR407C PUF6Q04373 656 aaKnown RBP4.38□□□□□ -1.71
TRS120YDR407C ARG8P18544 423 aa4.38□□□□□ -1.71
TRS120YDR407C RCR1P38212 213 aa4.38□□□□□ -1.71
TRS120YDR407C FPR3P38911 411 aaKnown RBP4.38□□□□□ -1.71
TRS120YDR407C YLR407WQ06070 228 aa4.38□□□□□ -1.71
TRS120YDR407C AOS1Q06624 347 aa4.38□□□□□ -1.71
TRS120YDR407C EBP2P36049 427 aaKnown RBP4.37□□□□□ -1.71
TRS120YDR407C HXT13P39924 564 aa4.37□□□□□ -1.71
TRS120YDR407C YLR271WQ06152 274 aa4.37□□□□□ -1.71
TRS120YDR407C KEX1P09620 729 aa4.37□□□□□ -1.71
TRS120YDR407C HXT17P53631 564 aa4.37□□□□□ -1.71
TRS120YDR407C BMS1Q08965 1183 aaKnown RBP4.37□□□□□ -1.71
TRS120YDR407C DCD1P06773 312 aa4.36□□□□□ -1.71
TRS120YDR407C PKH3Q03306 898 aaPredicted RBP4.36□□□□□ -1.71
TRS120YDR407C RIF1P29539 1916 aa4.36□□□□□ -1.71
TRS120YDR407C CST6P40535 587 aa4.36□□□□□ -1.71
TRS120YDR407C KRI1P42846 591 aaKnown RBP4.36□□□□□ -1.71
TRS120YDR407C MSB3P48566 633 aaPredicted RBP4.36□□□□□ -1.71
TRS120YDR407C ITC1P53125 1264 aa4.36□□□□□ -1.71
TRS120YDR407C GAS4Q08271 471 aa4.36□□□□□ -1.71
TRS120YDR407C YPR204WQ08995 1032 aa4.36□□□□□ -1.71
TRS120YDR407C MTC5Q03897 1148 aa4.35□□□□□ -1.71
TRS120YDR407C LAM4P38800 1345 aa4.35□□□□□ -1.71
TRS120YDR407C MRP7P12687 371 aa4.35□□□□□ -1.71
TRS120YDR407C UBP12P39538 1254 aa4.35□□□□□ -1.71
TRS120YDR407C THI12P42883 340 aa4.35□□□□□ -1.71
TRS120YDR407C THI5P43534 340 aa4.35□□□□□ -1.71
TRS120YDR407C THI11P47183 340 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms