RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	TY1B-JR1	P47098	1755 aa		6.19	□□□□□ -1.42
PAL1	YDR348C	TY1B-ML2	Q03434	1755 aa	Known RBP	6.19	□□□□□ -1.42
PAL1	YDR348C	TY1B-ER1	Q03612	1755 aa		6.19	□□□□□ -1.42
PAL1	YDR348C	TY1B-ML1	Q04711	1755 aa	Known RBP	6.19	□□□□□ -1.42
PAL1	YDR348C	TY1B-GR2	Q12269	1755 aa		6.19	□□□□□ -1.42
PAL1	YDR348C	TY1B-OL	Q12273	1755 aa		6.19	□□□□□ -1.42
PAL1	YDR348C	TY1B-PL	Q12414	1755 aa	Known RBP	6.19	□□□□□ -1.42
PAL1	YDR348C	CAT8	P39113	1433 aa		6.18	□□□□□ -1.42
PAL1	YDR348C	GUA1	P38625	525 aa	Known RBP	6.18	□□□□□ -1.42
PAL1	YDR348C	SLN1	P39928	1220 aa	Predicted RBP	6.18	□□□□□ -1.42
PAL1	YDR348C	DJP1	P40564	432 aa		6.18	□□□□□ -1.42
PAL1	YDR348C	BNI4	P53858	892 aa		6.18	□□□□□ -1.42
PAL1	YDR348C	CDC45	Q08032	650 aa		6.18	□□□□□ -1.42
PAL1	YDR348C	RVB2	Q12464	471 aa	Known RBP	6.18	□□□□□ -1.42
PAL1	YDR348C	ARO1	P08566	1588 aa	Known RBP	6.17	□□□□□ -1.42
PAL1	YDR348C	TY3B-I	Q7LHG5	1498 aa	Known RBP	6.17	□□□□□ -1.42
PAL1	YDR348C	XDJ1	P39102	459 aa		6.16	□□□□□ -1.42
PAL1	YDR348C	VPS27	P40343	622 aa	Known RBP	6.16	□□□□□ -1.42
PAL1	YDR348C	CSC1	Q06538	782 aa		6.16	□□□□□ -1.42
PAL1	YDR348C	QCR6	P00127	147 aa		6.15	□□□□□ -1.42
PAL1	YDR348C	PTC2	P39966	464 aa	Known RBP	6.15	□□□□□ -1.42
PAL1	YDR348C	TEA1	P47988	759 aa		6.15	□□□□□ -1.42
PAL1	YDR348C	YPR109W	Q06104	294 aa		6.15	□□□□□ -1.42
PAL1	YDR348C	RPP0	P05317	312 aa	Known RBP	6.15	□□□□□ -1.43
PAL1	YDR348C	PCT1	P13259	424 aa		6.15	□□□□□ -1.43
PAL1	YDR348C	PAF1	P38351	445 aa		6.15	□□□□□ -1.43
PAL1	YDR348C	ISU2	Q12056	156 aa		6.14	□□□□□ -1.43
PAL1	YDR348C	IQG1	Q12280	1495 aa		6.14	□□□□□ -1.43
PAL1	YDR348C	TY1B-BR	Q12193	1756 aa		6.13	□□□□□ -1.43
PAL1	YDR348C	TY1B-GR3	Q12316	1755 aa		6.13	□□□□□ -1.43
PAL1	YDR348C	TY1B-OR	Q92393	1755 aa		6.13	□□□□□ -1.43
PAL1	YDR348C	YML082W	Q04533	649 aa	Known RBP	6.13	□□□□□ -1.43
PAL1	YDR348C	TFB4	Q12004	338 aa		6.13	□□□□□ -1.43
PAL1	YDR348C	RPP1B	P10622	106 aa	Known RBP	6.12	□□□□□ -1.43
PAL1	YDR348C	NIS1	P53939	407 aa		6.12	□□□□□ -1.43
PAL1	YDR348C	TUM1	Q08686	304 aa	Known RBP	6.12	□□□□□ -1.43
PAL1	YDR348C	EDE1	P34216	1381 aa		6.12	□□□□□ -1.43
PAL1	YDR348C	NUP157	P40064	1391 aa	Known RBP	6.12	□□□□□ -1.43
PAL1	YDR348C	PDR12	Q02785	1511 aa		6.12	□□□□□ -1.43
PAL1	YDR348C	KTR1	P27810	393 aa	Known RBP	6.11	□□□□□ -1.43
PAL1	YDR348C	YRB30	P53107	440 aa	Predicted RBP	6.11	□□□□□ -1.43
PAL1	YDR348C	CTR9	P89105	1077 aa		6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-JR2	P47100	1755 aa	Known RBP	6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-ER2	Q03619	1755 aa		6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-MR1	Q04214	1755 aa		6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-MR2	Q04670	1755 aa	Known RBP	6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-LR1	Q12088	1755 aa	Known RBP	6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-NL1	Q12112	1755 aa		6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-GR1	Q12141	1755 aa		6.11	□□□□□ -1.43
PAL1	YDR348C	TY1B-BL	Q12490	1755 aa		6.11	□□□□□ -1.43
PAL1	YDR348C	PEX21	P50091	288 aa		6.1	□□□□□ -1.43
PAL1	YDR348C	KIP3	P53086	805 aa	Known RBP	6.1	□□□□□ -1.43
PAL1	YDR348C	YGR130C	P53278	816 aa		6.1	□□□□□ -1.43
PAL1	YDR348C	YRR1	Q12172	810 aa		6.1	□□□□□ -1.43
PAL1	YDR348C	DNF2	Q12675	1612 aa		6.1	□□□□□ -1.43
PAL1	YDR348C	CLB5	P30283	435 aa		6.09	□□□□□ -1.43
PAL1	YDR348C	TYW1	Q08960	810 aa	Known RBP	6.09	□□□□□ -1.43
PAL1	YDR348C	MSP1	P28737	362 aa		6.09	□□□□□ -1.44
PAL1	YDR348C	YDL144C	Q07589	356 aa		6.09	□□□□□ -1.44
PAL1	YDR348C	NOT3	P06102	836 aa	Known RBP	6.08	□□□□□ -1.44
PAL1	YDR348C	PDR1	P12383	1068 aa		6.08	□□□□□ -1.44
PAL1	YDR348C	SUI2	P20459	304 aa	Known RBP	6.08	□□□□□ -1.44
PAL1	YDR348C	VPS24	P36095	224 aa	Known RBP	6.08	□□□□□ -1.44
PAL1	YDR348C	CSN12	P47130	423 aa		6.08	□□□□□ -1.44
PAL1	YDR348C	FPK1	P53739	893 aa		6.08	□□□□□ -1.44
PAL1	YDR348C	BUD21	Q08492	214 aa	Predicted RBP	6.08	□□□□□ -1.44
PAL1	YDR348C	YOR093C	Q12275	1648 aa		6.07	□□□□□ -1.44
PAL1	YDR348C	SCJ1	P25303	377 aa		6.07	□□□□□ -1.44
PAL1	YDR348C	KNS1	P32350	737 aa	Predicted RBP	6.07	□□□□□ -1.44
PAL1	YDR348C	YPP1	P46951	817 aa		6.07	□□□□□ -1.44
PAL1	YDR348C	YPR015C	Q12531	247 aa		6.07	□□□□□ -1.44
PAL1	YDR348C	TRM3	Q07527	1436 aa		6.07	□□□□□ -1.44
PAL1	YDR348C	RAM1	P22007	431 aa		6.06	□□□□□ -1.44
PAL1	YDR348C	NAP1	P25293	417 aa	Known RBP	6.06	□□□□□ -1.44
PAL1	YDR348C	HPC2	Q01448	625 aa		6.06	□□□□□ -1.44
PAL1	YDR348C	TFB3	Q03290	321 aa		6.06	□□□□□ -1.44
PAL1	YDR348C	NOP58	Q12499	511 aa	Known RBP	6.06	□□□□□ -1.44
PAL1	YDR348C	LTE1	P07866	1435 aa		6.06	□□□□□ -1.44
PAL1	YDR348C	ARL1	P38116	183 aa	Known RBP	6.05	□□□□□ -1.44
PAL1	YDR348C	TAF5	P38129	798 aa		6.05	□□□□□ -1.44
PAL1	YDR348C	SIT4	P20604	311 aa		6.04	□□□□□ -1.44
PAL1	YDR348C	PKC1	P24583	1151 aa		6.04	□□□□□ -1.44
PAL1	YDR348C	HST2	P53686	357 aa		6.04	□□□□□ -1.44
PAL1	YDR348C	ERF2	Q06551	359 aa		6.04	□□□□□ -1.44
PAL1	YDR348C	BUD3	P25558	1636 aa		6.04	□□□□□ -1.44
PAL1	YDR348C	NTE1	Q04958	1679 aa		6.03	□□□□□ -1.44
PAL1	YDR348C	CDC25	P04821	1589 aa		6.03	□□□□□ -1.44
PAL1	YDR348C	DPS1	P04802	557 aa	Known RBP	6.03	□□□□□ -1.44
PAL1	YDR348C	NUD1	P32336	851 aa		6.03	□□□□□ -1.44
PAL1	YDR348C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	not detected
PAL1	YDR348C	YMR196W	Q04336	1088 aa		6.03	□□□□□ -1.44
PAL1	YDR348C	DOP1	Q03921	1698 aa		6.03	□□□□□ -1.44
PAL1	YDR348C	ESS1	P22696	170 aa		6.02	□□□□□ -1.45
PAL1	YDR348C	STR2	P47164	639 aa		6.02	□□□□□ -1.45
PAL1	YDR348C	CWC22	P53333	577 aa	Known RBP	6.02	□□□□□ -1.45
PAL1	YDR348C	LSP1	Q12230	341 aa	Known RBP	6.02	□□□□□ -1.45
PAL1	YDR348C	RLF2	Q12495	606 aa		6.02	□□□□□ -1.45
PAL1	YDR348C	RPO21	P04050	1733 aa	Known RBP	6.02	□□□□□ -1.45
PAL1	YDR348C	SPO14	P36126	1683 aa		6.01	□□□□□ -1.45
PAL1	YDR348C	KEX2	P13134	814 aa		6.01	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms