RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	PAM1	P37304	830 aa	Known RBP	4.86	□□□□□ -1.63
HTA1	YDR225W	YEL077C	Q3E7X8	1277 aa		4.86	□□□□□ -1.63
HTA1	YDR225W	RRN7	P40992	514 aa		4.85	□□□□□ -1.63
HTA1	YDR225W	LAM6	Q08001	693 aa		4.85	□□□□□ -1.63
HTA1	YDR225W	SLY41	P22215	453 aa		4.84	□□□□□ -1.63
HTA1	YDR225W	SPT16	P32558	1035 aa	Known RBP	4.84	□□□□□ -1.63
HTA1	YDR225W	PEP12	P32854	288 aa		4.84	□□□□□ -1.63
HTA1	YDR225W	MET10	P39692	1035 aa		4.84	□□□□□ -1.63
HTA1	YDR225W	NAP1	P25293	417 aa	Known RBP	4.83	□□□□□ -1.64
HTA1	YDR225W	CST6	P40535	587 aa		4.83	□□□□□ -1.64
HTA1	YDR225W	YPP1	P46951	817 aa		4.83	□□□□□ -1.64
HTA1	YDR225W	STM1	P39015	273 aa	Known RBP	4.82	□□□□□ -1.64
HTA1	YDR225W	YNL115C	P53925	644 aa		4.82	□□□□□ -1.64
HTA1	YDR225W	RDS2	P19541	446 aa	Known RBP	4.81	□□□□□ -1.64
HTA1	YDR225W	PAC1	P39946	494 aa	Known RBP	4.81	□□□□□ -1.64
HTA1	YDR225W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
HTA1	YDR225W	RTF1	P53064	558 aa		4.81	□□□□□ -1.64
HTA1	YDR225W	NAF1	P53919	492 aa	Known RBP	4.81	□□□□□ -1.64
HTA1	YDR225W	ECM23	Q02710	187 aa		4.81	□□□□□ -1.64
HTA1	YDR225W	AGE1	Q04412	482 aa		4.81	□□□□□ -1.64
HTA1	YDR225W	TRM1	P15565	570 aa	Known RBP	4.8	□□□□□ -1.64
HTA1	YDR225W	IPL1	P38991	367 aa		4.8	□□□□□ -1.64
HTA1	YDR225W	CLA4	P48562	842 aa		4.8	□□□□□ -1.64
HTA1	YDR225W	FRK1	Q03002	865 aa	Predicted RBP	4.8	□□□□□ -1.64
HTA1	YDR225W	PAT1	P25644	796 aa	Known RBP	4.79	□□□□□ -1.64
HTA1	YDR225W	KTR7	P40504	517 aa		4.79	□□□□□ -1.64
HTA1	YDR225W	PUS6	P53294	404 aa		4.79	□□□□□ -1.64
HTA1	YDR225W	TUB4	P53378	473 aa		4.79	□□□□□ -1.64
HTA1	YDR225W	MCM16	Q12262	181 aa		4.79	□□□□□ -1.64
HTA1	YDR225W	YBL113C	Q7M4S9	792 aa		4.79	□□□□□ -1.64
HTA1	YDR225W	TRK1	P12685	1235 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	GAL2	P13181	574 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	SEC20	P28791	383 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	ASF1	P32447	279 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	ERP5	P38819	212 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	BDP1	P46678	594 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	ITT1	Q04638	464 aa		4.78	□□□□□ -1.64
HTA1	YDR225W	UBX7	P38349	436 aa		4.77	□□□□□ -1.65
HTA1	YDR225W	AIR1	P40507	360 aa	Known RBP	4.77	□□□□□ -1.65
HTA1	YDR225W	IOC4	Q04213	475 aa		4.77	□□□□□ -1.65
HTA1	YDR225W	MSC6	Q08818	692 aa	Known RBP	4.77	□□□□□ -1.65
HTA1	YDR225W	ENV9	Q08651	330 aa		4.76	□□□□□ -1.65
HTA1	YDR225W	ISF1	P32488	338 aa		4.75	□□□□□ -1.65
HTA1	YDR225W	ALD2	P47771	506 aa		4.75	□□□□□ -1.65
HTA1	YDR225W	KAR5	Q04746	504 aa		4.75	□□□□□ -1.65
HTA1	YDR225W	MOD5	P07884	428 aa		4.74	□□□□□ -1.65
HTA1	YDR225W	TRL1	P09880	827 aa	Known RBP	4.74	□□□□□ -1.65
HTA1	YDR225W	TPS3	P38426	1054 aa	Known RBP	4.74	□□□□□ -1.65
HTA1	YDR225W	EMP47	P43555	445 aa		4.74	□□□□□ -1.65
HTA1	YDR225W	CWC15	Q03772	175 aa	Known RBP	4.74	□□□□□ -1.65
HTA1	YDR225W	MDJ2	P42834	146 aa		4.73	□□□□□ -1.65
HTA1	YDR225W	TBF1	Q02457	562 aa		4.73	□□□□□ -1.65
HTA1	YDR225W	PUS5	Q06244	254 aa		4.73	□□□□□ -1.65
HTA1	YDR225W	RRP15	Q06511	250 aa	Predicted RBP	4.73	□□□□□ -1.65
HTA1	YDR225W	PHO87	P25360	923 aa		4.72	□□□□□ -1.65
HTA1	YDR225W	YHL050C	P38721	697 aa		4.72	□□□□□ -1.65
HTA1	YDR225W	YHR219W	P38900	624 aa		4.72	□□□□□ -1.65
HTA1	YDR225W	PUF6	Q04373	656 aa	Known RBP	4.72	□□□□□ -1.65
HTA1	YDR225W	GRS1	P38088	690 aa	Known RBP	4.71	□□□□□ -1.66
HTA1	YDR225W	POL32	P47110	350 aa		4.71	□□□□□ -1.66
HTA1	YDR225W	STE20	Q03497	939 aa	Known RBP	4.71	□□□□□ -1.66
HTA1	YDR225W	FRA1	Q07825	749 aa		4.71	□□□□□ -1.66
HTA1	YDR225W	YTA7	P40340	1379 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	HAP4	P14064	554 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	ATE1	P16639	503 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	PPX1	P38698	397 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	OCA5	P38738	679 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	ATG3	P40344	310 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	YDL206W	Q12424	762 aa		4.7	□□□□□ -1.66
HTA1	YDR225W	PDC1	P06169	563 aa	Known RBP	4.69	□□□□□ -1.66
HTA1	YDR225W	TEC1	P18412	486 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	GUT2	P32191	649 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	FIG4	P42837	879 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	ACS2	P52910	683 aa	Known RBP	4.69	□□□□□ -1.66
HTA1	YDR225W	ATG1	P53104	897 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	KXD1	P53158	218 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	HED1	Q03937	162 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	PNP1	Q05788	311 aa		4.69	□□□□□ -1.66
HTA1	YDR225W	CDC4	P07834	779 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	BOL3	P39724	118 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	RPA14	P50106	137 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	ROM1	P53046	1155 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	SVF1	Q05515	481 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	UTP13	Q05946	817 aa	Known RBP	4.68	□□□□□ -1.66
HTA1	YDR225W	YPR084W	Q06821	456 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	WHI5	Q12416	295 aa		4.68	□□□□□ -1.66
HTA1	YDR225W	SRS2	P12954	1174 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	SEC8	P32855	1065 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	SOH1	P38633	127 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	RRD1	P40454	393 aa	Known RBP	4.67	□□□□□ -1.66
HTA1	YDR225W	THI12	P42883	340 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	THI5	P43534	340 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	HXT10	P43581	546 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	APL6	P46682	809 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	THI11	P47183	340 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	YPR097W	Q06839	1073 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	PUN1	Q06991	263 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	THI13	Q07748	340 aa		4.67	□□□□□ -1.66
HTA1	YDR225W	TPD3	P31383	635 aa		4.66	□□□□□ -1.66
HTA1	YDR225W	BRE2	P43132	505 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms