RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C SAP155P43612 1002 aa7.76□□□□□ -1.17
VPS61YDR136C YPR148CQ06523 435 aa7.76□□□□□ -1.17
VPS61YDR136C NOP53Q12080 455 aaKnown RBP7.76□□□□□ -1.17
VPS61YDR136C HEF3P53978 1044 aaKnown RBP7.75□□□□□ -1.17
VPS61YDR136C THI22Q06490 572 aa7.75□□□□□ -1.17
VPS61YDR136C YIL092WP40497 633 aa7.74□□□□□ -1.17
VPS61YDR136C PDI1P17967 522 aaKnown RBP7.73□□□□□ -1.17
VPS61YDR136C PRD1P25375 712 aa7.73□□□□□ -1.17
VPS61YDR136C UBP9P39967 754 aa7.73□□□□□ -1.17
VPS61YDR136C TPD3P31383 635 aa7.72□□□□□ -1.17
VPS61YDR136C PPH3P32345 308 aa7.72□□□□□ -1.17
VPS61YDR136C MRX12P47084 519 aa7.72□□□□□ -1.17
VPS61YDR136C RCM1P53972 490 aa7.72□□□□□ -1.17
VPS61YDR136C GRX4P32642 244 aa7.71□□□□□ -1.18
VPS61YDR136C SNF7P39929 240 aaKnown RBP7.71□□□□□ -1.18
VPS61YDR136C POL32P47110 350 aa7.71□□□□□ -1.18
VPS61YDR136C RPO41P13433 1351 aaKnown RBP7.71□□□□□ -1.18
VPS61YDR136C EDS1P38073 919 aa7.7□□□□□ -1.18
VPS61YDR136C SAM3Q08986 587 aa7.7□□□□□ -1.18
VPS61YDR136C YRF1-2P40105 1681 aa7.7□□□□□ -1.18
VPS61YDR136C DAL5P15365 543 aa7.69□□□□□ -1.18
VPS61YDR136C RIA1P53893 1110 aa7.69□□□□□ -1.18
VPS61YDR136C RTT109Q07794 436 aa7.69□□□□□ -1.18
VPS61YDR136C PCT1P13259 424 aa7.68□□□□□ -1.18
VPS61YDR136C PTC3P34221 468 aaKnown RBP7.68□□□□□ -1.18
VPS61YDR136C MTR4P47047 1073 aaKnown RBP7.68□□□□□ -1.18
VPS61YDR136C RTF1P53064 558 aa7.68□□□□□ -1.18
VPS61YDR136C HIM1Q06674 414 aa7.68□□□□□ -1.18
VPS61YDR136C MAK21Q12176 1025 aaKnown RBP7.68□□□□□ -1.18
VPS61YDR136C RRP5Q05022 1729 aaKnown RBP7.67□□□□□ -1.18
VPS61YDR136C YIL177CP40434 1758 aa7.67□□□□□ -1.18
VPS61YDR136C YJL225CP40889 1758 aa7.67□□□□□ -1.18
VPS61YDR136C TY4B-HP0C2J7 1802 aa7.67□□□□□ -1.18
VPS61YDR136C TY4B-JP47024 1803 aa7.67□□□□□ -1.18
VPS61YDR136C LEU2P04173 364 aaPredicted RBP7.67□□□□□ -1.18
VPS61YDR136C ROX1P25042 368 aa7.67□□□□□ -1.18
VPS61YDR136C PAP2P53632 584 aaKnown RBP7.67□□□□□ -1.18
VPS61YDR136C MSB4Q12317 492 aa7.66□□□□□ -1.18
VPS61YDR136C ADE6P38972 1358 aaKnown RBP7.66□□□□□ -1.18
VPS61YDR136C CPS1P27614 576 aa7.65□□□□□ -1.18
VPS61YDR136C CSE4P36012 229 aa7.64□□□□□ -1.19
VPS61YDR136C YOL036WQ08206 761 aa7.64□□□□□ -1.19
VPS61YDR136C GRE2Q12068 342 aaKnown RBP7.64□□□□□ -1.19
VPS61YDR136C WSC3Q12215 556 aa7.64□□□□□ -1.19
VPS61YDR136C ATH1P48016 1211 aa7.63□□□□□ -1.19
VPS61YDR136C GYP5Q12344 894 aa7.63□□□□□ -1.19
VPS61YDR136C YBL029C-AQ3E756 94 aa7.63□□□□□ -1.19
VPS61YDR136C EDE1P34216 1381 aa7.62□□□□□ -1.19
VPS61YDR136C CAB3P36076 571 aa7.62□□□□□ -1.19
VPS61YDR136C PRP43P53131 767 aaKnown RBP7.62□□□□□ -1.19
VPS61YDR136C PUF6Q04373 656 aaKnown RBP7.62□□□□□ -1.19
VPS61YDR136C FKS3Q04952 1785 aa7.61□□□□□ -1.19
VPS61YDR136C VPS70P47161 811 aa7.61□□□□□ -1.19
VPS61YDR136C YNR029CP53729 429 aaKnown RBP7.61□□□□□ -1.19
VPS61YDR136C GUT1P32190 709 aa7.6□□□□□ -1.19
VPS61YDR136C VPS24P36095 224 aaKnown RBP7.6□□□□□ -1.19
VPS61YDR136C SET4P42948 560 aa7.6□□□□□ -1.19
VPS61YDR136C LSP1Q12230 341 aaKnown RBP7.6□□□□□ -1.19
VPS61YDR136C URB1P34241 1764 aaKnown RBP7.59□□□□□ -1.19
VPS61YDR136C BUD31P25337 157 aaPredicted RBP7.59□□□□□ -1.19
VPS61YDR136C EAP1P36041 632 aaKnown RBP7.59□□□□□ -1.19
VPS61YDR136C DJP1P40564 432 aa7.59□□□□□ -1.19
VPS61YDR136C VNX1P42839 908 aa7.59□□□□□ -1.19
VPS61YDR136C ECM16Q04217 1267 aaKnown RBP7.59□□□□□ -1.19
VPS61YDR136C TRP5P00931 707 aaKnown RBP7.58□□□□□ -1.2
VPS61YDR136C EBP2P36049 427 aaKnown RBP7.58□□□□□ -1.2
VPS61YDR136C AKL1P38080 1108 aaKnown RBP7.58□□□□□ -1.2
VPS61YDR136C SLN1P39928 1220 aaPredicted RBP7.58□□□□□ -1.2
VPS61YDR136C DSD1P53095 428 aa7.58□□□□□ -1.2
VPS61YDR136C MSP1P28737 362 aa7.57□□□□□ -1.2
VPS61YDR136C DPS1P04802 557 aaKnown RBP7.56□□□□□ -1.2
VPS61YDR136C RPS24AP0CX31 135 aaKnown RBP7.56□□□□□ -1.2
VPS61YDR136C RPS24BP0CX32 135 aaKnown RBP7.56□□□□□ -1.2
VPS61YDR136C GYP7P48365 746 aa7.56□□□□□ -1.2
VPS61YDR136C YNL050CP53952 270 aa7.56□□□□□ -1.2
VPS61YDR136C MAK10Q02197 733 aa7.56□□□□□ -1.2
VPS61YDR136C RAD50P12753 1312 aa7.55□□□□□ -1.2
VPS61YDR136C HTA1P04911 132 aaKnown RBP7.55□□□□□ -1.2
VPS61YDR136C HTA2P04912 132 aa7.55□□□□□ -1.2
VPS61YDR136C TIF11P38912 153 aaKnown RBP7.55□□□□□ -1.2
VPS61YDR136C ILV3P39522 585 aaKnown RBP7.55□□□□□ -1.2
VPS61YDR136C SPP1Q03012 353 aa7.55□□□□□ -1.2
VPS61YDR136C GAS4Q08271 471 aa7.55□□□□□ -1.2
VPS61YDR136C MAM1P40065 302 aa7.54□□□□□ -1.2
VPS61YDR136C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
VPS61YDR136C YPP1P46951 817 aa7.54□□□□□ -1.2
VPS61YDR136C SRT1Q03175 343 aa7.54□□□□□ -1.2
VPS61YDR136C DCW1P36091 449 aa7.53□□□□□ -1.2
VPS61YDR136C RLF2Q12495 606 aa7.53□□□□□ -1.2
VPS61YDR136C NTH2P35172 780 aa7.52□□□□□ -1.21
VPS61YDR136C RRT14P40470 206 aa7.52□□□□□ -1.21
VPS61YDR136C NKP2Q06162 153 aa7.52□□□□□ -1.21
VPS61YDR136C DUR1,2P32528 1835 aaKnown RBP7.52□□□□□ -1.21
VPS61YDR136C LYS2P07702 1392 aa7.51□□□□□ -1.21
VPS61YDR136C ZDS1P50111 915 aaKnown RBP7.51□□□□□ -1.21
VPS61YDR136C ITC1P53125 1264 aa7.51□□□□□ -1.21
VPS61YDR136C ROM2P51862 1356 aaKnown RBP7.5□□□□□ -1.21
VPS61YDR136C RPS19AP07280 144 aaKnown RBP7.5□□□□□ -1.21
VPS61YDR136C RPS19BP07281 144 aaPredicted RBP7.5□□□□□ -1.21
VPS61YDR136C SRS2P12954 1174 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms