RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeastyeast

Gene TRM8, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM8YDL201W PUS6P53294 404 aa6.58□□□□□ -1.36
TRM8YDL201W TBF1Q02457 562 aa6.58□□□□□ -1.36
TRM8YDL201W URN1Q06525 465 aaKnown RBP6.58□□□□□ -1.36
TRM8YDL201W ALR1Q08269 859 aa6.58□□□□□ -1.36
TRM8YDL201W UGA3P26370 528 aa6.57□□□□□ -1.36
TRM8YDL201W KIP2P28743 706 aa6.57□□□□□ -1.36
TRM8YDL201W SLD2P34252 453 aa6.57□□□□□ -1.36
TRM8YDL201W SNU71P53207 620 aaKnown RBP6.57□□□□□ -1.36
TRM8YDL201W YPR097WQ06839 1073 aa6.57□□□□□ -1.36
TRM8YDL201W TRM1P15565 570 aaKnown RBP6.56□□□□□ -1.36
TRM8YDL201W PTK2P47116 818 aaKnown RBP6.55□□□□□ -1.36
TRM8YDL201W HST2P53686 357 aa6.55□□□□□ -1.36
TRM8YDL201W IXR1P33417 597 aa6.54□□□□□ -1.36
TRM8YDL201W CAF120P53836 1060 aa6.53□□□□□ -1.36
TRM8YDL201W OPT2Q06593 877 aa6.53□□□□□ -1.36
TRM8YDL201W HSL1P34244 1518 aa6.52□□□□□ -1.37
TRM8YDL201W MRT4P33201 236 aaKnown RBP6.52□□□□□ -1.37
TRM8YDL201W HPC2Q01448 625 aa6.52□□□□□ -1.37
TRM8YDL201W SRF1Q12516 437 aa6.52□□□□□ -1.37
TRM8YDL201W ACO2P39533 789 aa6.51□□□□□ -1.37
TRM8YDL201W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
TRM8YDL201W MMP1Q12372 583 aa6.51□□□□□ -1.37
TRM8YDL201W GLC3P32775 704 aa6.5□□□□□ -1.37
TRM8YDL201W SPT6P23615 1451 aaKnown RBP6.49□□□□□ -1.37
TRM8YDL201W SUB2Q07478 446 aaKnown RBP6.49□□□□□ -1.37
TRM8YDL201W ESS1P22696 170 aa6.48□□□□□ -1.37
TRM8YDL201W GUA1P38625 525 aaKnown RBP6.48□□□□□ -1.37
TRM8YDL201W MET10P39692 1035 aa6.48□□□□□ -1.37
TRM8YDL201W YLR346CQ06139 101 aa6.48□□□□□ -1.37
TRM8YDL201W SWR1Q05471 1514 aa6.48□□□□□ -1.37
TRM8YDL201W GLN1P32288 370 aaKnown RBP6.47□□□□□ -1.37
TRM8YDL201W BRL1P38770 471 aa6.47□□□□□ -1.37
TRM8YDL201W NUP85P46673 744 aa6.47□□□□□ -1.37
TRM8YDL201W TYW1Q08960 810 aaKnown RBP6.47□□□□□ -1.37
TRM8YDL201W ATF2P53296 535 aa6.46□□□□□ -1.38
TRM8YDL201W YJU3P28321 313 aa6.45□□□□□ -1.38
TRM8YDL201W GLY1P37303 387 aaKnown RBP6.45□□□□□ -1.38
TRM8YDL201W MRX12P47084 519 aa6.45□□□□□ -1.38
TRM8YDL201W SSA4P22202 642 aaKnown RBP6.44□□□□□ -1.38
TRM8YDL201W VAC17P25591 423 aa6.44□□□□□ -1.38
TRM8YDL201W RTT106P40161 455 aa6.43□□□□□ -1.38
TRM8YDL201W YIR007WP40566 764 aa6.43□□□□□ -1.38
TRM8YDL201W MIP1P15801 1254 aa6.42□□□□□ -1.38
TRM8YDL201W SCW11P53189 542 aa6.42□□□□□ -1.38
TRM8YDL201W ITT1Q04638 464 aa6.42□□□□□ -1.38
TRM8YDL201W TY1A-BLQ12266 440 aa6.42□□□□□ -1.38
TRM8YDL201W BRN1P38170 754 aa6.41□□□□□ -1.38
TRM8YDL201W YTA7P40340 1379 aa6.41□□□□□ -1.38
TRM8YDL201W HEM3P28789 327 aa6.4□□□□□ -1.38
TRM8YDL201W YBL086CP38177 466 aa6.4□□□□□ -1.38
TRM8YDL201W RSC30P38781 883 aa6.4□□□□□ -1.38
TRM8YDL201W AAD14P42884 376 aa6.4□□□□□ -1.38
TRM8YDL201W DOS2P54858 310 aa6.4□□□□□ -1.38
TRM8YDL201W TFB3Q03290 321 aa6.4□□□□□ -1.38
TRM8YDL201W HIR3P47171 1648 aa6.39□□□□□ -1.39
TRM8YDL201W PAM1P37304 830 aaKnown RBP6.39□□□□□ -1.39
TRM8YDL201W YGR035CP53222 116 aa6.39□□□□□ -1.39
TRM8YDL201W ARG82P07250 355 aa6.38□□□□□ -1.39
TRM8YDL201W KTR1P27810 393 aaKnown RBP6.38□□□□□ -1.39
TRM8YDL201W TRK2P28584 889 aa6.38□□□□□ -1.39
TRM8YDL201W APP1P53933 587 aa6.38□□□□□ -1.39
TRM8YDL201W RPL34AP87262 121 aaPredicted RBP6.38□□□□□ -1.39
TRM8YDL201W HPF1Q05164 967 aa6.38□□□□□ -1.39
TRM8YDL201W SSA2P10592 639 aaKnown RBP6.37□□□□□ -1.39
TRM8YDL201W LSC2P53312 427 aa6.37□□□□□ -1.39
TRM8YDL201W PKH3Q03306 898 aaPredicted RBP6.37□□□□□ -1.39
TRM8YDL201W CDC3P32457 520 aaKnown RBP6.36□□□□□ -1.39
TRM8YDL201W DLD1P32891 587 aa6.36□□□□□ -1.39
TRM8YDL201W SUB1P54000 292 aaKnown RBP6.36□□□□□ -1.39
TRM8YDL201W ASF1P32447 279 aa6.35□□□□□ -1.39
TRM8YDL201W RRN6P32786 894 aa6.35□□□□□ -1.39
TRM8YDL201W EMW1P42842 904 aaKnown RBP6.35□□□□□ -1.39
TRM8YDL201W YJR098CP47139 656 aa6.35□□□□□ -1.39
TRM8YDL201W UBP2Q01476 1272 aa6.34□□□□□ -1.39
TRM8YDL201W XRN1P22147 1528 aaKnown RBP6.34□□□□□ -1.39
TRM8YDL201W ARG8P18544 423 aa6.33□□□□□ -1.4
TRM8YDL201W NUG1P40010 520 aaKnown RBP6.33□□□□□ -1.4
TRM8YDL201W RPL34BP40525 121 aaKnown RBP6.33□□□□□ -1.4
TRM8YDL201W FPR4Q06205 392 aaPredicted RBP6.33□□□□□ -1.4
TRM8YDL201W MTC5Q03897 1148 aa6.32□□□□□ -1.4
TRM8YDL201W TCB1Q12466 1186 aa6.32□□□□□ -1.4
TRM8YDL201W SSF1P38789 453 aaPredicted RBP6.31□□□□□ -1.4
TRM8YDL201W BIM1P40013 344 aa6.31□□□□□ -1.4
TRM8YDL201W FIG4P42837 879 aa6.31□□□□□ -1.4
TRM8YDL201W SPC42P36094 363 aa6.3□□□□□ -1.4
TRM8YDL201W FAR11P53917 953 aa6.3□□□□□ -1.4
TRM8YDL201W VPS72Q03388 795 aa6.3□□□□□ -1.4
TRM8YDL201W ROG3P43602 733 aa6.29□□□□□ -1.4
TRM8YDL201W YJL007CP47080 104 aa6.29□□□□□ -1.4
TRM8YDL201W RTS3P53289 263 aa6.29□□□□□ -1.4
TRM8YDL201W MKS1P34072 584 aa6.28□□□□□ -1.4
TRM8YDL201W CSN12P47130 423 aa6.28□□□□□ -1.4
TRM8YDL201W DFG5Q05031 458 aa6.28□□□□□ -1.4
TRM8YDL201W SIN3P22579 1536 aa6.28□□□□□ -1.4
TRM8YDL201W REV3P14284 1504 aa6.27□□□□□ -1.41
TRM8YDL201W OCA5P38738 679 aa6.27□□□□□ -1.41
TRM8YDL201W OSH7P38755 437 aa6.27□□□□□ -1.41
TRM8YDL201W SEN54Q02825 467 aaPredicted RBP6.27□□□□□ -1.41
TRM8YDL201W TY1A-MR1Q04215 440 aa6.27□□□□□ -1.41
TRM8YDL201W KOG1P38873 1557 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms