RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SEC2	P17065	759 aa		8.43	□□□□□ -1.06
RPN5	YDL147W	HEM3	P28789	327 aa		8.43	□□□□□ -1.06
RPN5	YDL147W	FRA1	Q07825	749 aa		8.43	□□□□□ -1.06
RPN5	YDL147W	TY1A-DR4	O74302	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-H	P0C2I4	478 aa	Known RBP	8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-A	P0CX57	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-PR1	P0CX58	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-OR	P0CX59	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-PR2	P0CX60	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-DR5	P0CX65	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-ER2	P0CX66	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-GR3	P0CX67	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-LR1	P0CX68	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-MR2	P0CX69	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	FIG4	P42837	879 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-JR2	P47099	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-DR1	Q03856	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-ML1	Q04706	440 aa	Known RBP	8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-BR	Q12217	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-NL2	Q12470	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	TY1A-GR2	Q12485	440 aa		8.42	□□□□□ -1.06
RPN5	YDL147W	PRT1	P06103	763 aa	Known RBP	8.41	□□□□□ -1.06
RPN5	YDL147W	NOP7	P53261	605 aa	Known RBP	8.41	□□□□□ -1.06
RPN5	YDL147W	PDC1	P06169	563 aa	Known RBP	8.39	□□□□□ -1.07
RPN5	YDL147W	HAP4	P14064	554 aa		8.39	□□□□□ -1.07
RPN5	YDL147W	PHO87	P25360	923 aa		8.39	□□□□□ -1.07
RPN5	YDL147W	RGA1	P39083	1007 aa		8.39	□□□□□ -1.07
RPN5	YDL147W	RRN7	P40992	514 aa		8.39	□□□□□ -1.07
RPN5	YDL147W	UTP13	Q05946	817 aa	Known RBP	8.39	□□□□□ -1.07
RPN5	YDL147W	SPT16	P32558	1035 aa	Known RBP	8.38	□□□□□ -1.07
RPN5	YDL147W	SOH1	P38633	127 aa		8.38	□□□□□ -1.07
RPN5	YDL147W	STM1	P39015	273 aa	Known RBP	8.38	□□□□□ -1.07
RPN5	YDL147W	PAC1	P39946	494 aa	Known RBP	8.38	□□□□□ -1.07
RPN5	YDL147W	SNU71	P53207	620 aa	Known RBP	8.38	□□□□□ -1.07
RPN5	YDL147W	YEL077C	Q3E7X8	1277 aa		8.38	□□□□□ -1.07
RPN5	YDL147W	PUF6	Q04373	656 aa	Known RBP	8.37	□□□□□ -1.07
RPN5	YDL147W	HXT10	P43581	546 aa		8.36	□□□□□ -1.07
RPN5	YDL147W	SEN54	Q02825	467 aa	Predicted RBP	8.36	□□□□□ -1.07
RPN5	YDL147W	RAS1	P01119	309 aa		8.35	□□□□□ -1.07
RPN5	YDL147W	YPR084W	Q06821	456 aa		8.35	□□□□□ -1.07
RPN5	YDL147W	KAR5	Q04746	504 aa		8.34	□□□□□ -1.07
RPN5	YDL147W	YBL113C	Q7M4S9	792 aa		8.34	□□□□□ -1.07
RPN5	YDL147W	SEC20	P28791	383 aa		8.33	□□□□□ -1.08
RPN5	YDL147W	YPR015C	Q12531	247 aa		8.33	□□□□□ -1.08
RPN5	YDL147W	TSC13	Q99190	310 aa		8.32	□□□□□ -1.08
RPN5	YDL147W	VAC17	P25591	423 aa		8.31	□□□□□ -1.08
RPN5	YDL147W	YFL034W	P43564	1073 aa		8.31	□□□□□ -1.08
RPN5	YDL147W	ACS2	P52910	683 aa	Known RBP	8.31	□□□□□ -1.08
RPN5	YDL147W	CWC15	Q03772	175 aa	Known RBP	8.31	□□□□□ -1.08
RPN5	YDL147W	APL6	P46682	809 aa		8.3	□□□□□ -1.08
RPN5	YDL147W	GAS4	Q08271	471 aa		8.3	□□□□□ -1.08
RPN5	YDL147W	PDI1	P17967	522 aa	Known RBP	8.29	□□□□□ -1.08
RPN5	YDL147W	TPD3	P31383	635 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	ERP5	P38819	212 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	PUN1	Q06991	263 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	AIM44	Q99299	758 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	VAN1	P23642	535 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	ASF1	P32447	279 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	ROM1	P53046	1155 aa		8.29	□□□□□ -1.08
RPN5	YDL147W	RRN6	P32786	894 aa		8.28	□□□□□ -1.08
RPN5	YDL147W	RRD1	P40454	393 aa	Known RBP	8.28	□□□□□ -1.08
RPN5	YDL147W	PNP1	Q05788	311 aa		8.28	□□□□□ -1.08
RPN5	YDL147W	GYP1	Q08484	637 aa		8.28	□□□□□ -1.08
RPN5	YDL147W	SRS2	P12954	1174 aa		8.27	□□□□□ -1.09
RPN5	YDL147W	IXR1	P33417	597 aa		8.27	□□□□□ -1.09
RPN5	YDL147W	IPL1	P38991	367 aa		8.27	□□□□□ -1.09
RPN5	YDL147W	SAS4	Q04003	481 aa		8.27	□□□□□ -1.09
RPN5	YDL147W	ISR1	Q06098	443 aa	Known RBP	8.27	□□□□□ -1.09
RPN5	YDL147W	MSC6	Q08818	692 aa	Known RBP	8.27	□□□□□ -1.09
RPN5	YDL147W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	8.27	□□□□□ -1.09	not detected
RPN5	YDL147W	FUR4	P05316	633 aa	Known RBP	8.26	□□□□□ -1.09
RPN5	YDL147W	TPS3	P38426	1054 aa	Known RBP	8.26	□□□□□ -1.09
RPN5	YDL147W	MIP1	P15801	1254 aa		8.25	□□□□□ -1.09
RPN5	YDL147W	KIP2	P28743	706 aa		8.25	□□□□□ -1.09
RPN5	YDL147W	GRS1	P38088	690 aa	Known RBP	8.25	□□□□□ -1.09
RPN5	YDL147W	ITT1	Q04638	464 aa		8.25	□□□□□ -1.09
RPN5	YDL147W	TRS33	Q99394	268 aa		8.25	□□□□□ -1.09
RPN5	YDL147W	MET10	P39692	1035 aa		8.24	□□□□□ -1.09
RPN5	YDL147W	ATG20	Q07528	640 aa		8.24	□□□□□ -1.09
RPN5	YDL147W	AIM9	P40053	627 aa	Known RBP	8.23	□□□□□ -1.09
RPN5	YDL147W	MOD5	P07884	428 aa		8.22	□□□□□ -1.09
RPN5	YDL147W	TRL1	P09880	827 aa	Known RBP	8.22	□□□□□ -1.09
RPN5	YDL147W	YHL050C	P38721	697 aa		8.22	□□□□□ -1.09
RPN5	YDL147W	YHR219W	P38900	624 aa		8.22	□□□□□ -1.09
RPN5	YDL147W	CWH41	P53008	833 aa		8.22	□□□□□ -1.09
RPN5	YDL147W	HDA3	Q06623	655 aa		8.22	□□□□□ -1.09
RPN5	YDL147W	MRF1	P30775	413 aa	Predicted RBP	8.21	□□□□□ -1.1
RPN5	YDL147W	NTH2	P35172	780 aa		8.21	□□□□□ -1.1
RPN5	YDL147W	HAL5	P38970	855 aa	Known RBP	8.21	□□□□□ -1.1
RPN5	YDL147W	AMS1	P22855	1083 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	MDJ2	P42834	146 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	THI12	P42883	340 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	THI5	P43534	340 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	THI11	P47183	340 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	ATG1	P53104	897 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	THI13	Q07748	340 aa		8.2	□□□□□ -1.1
RPN5	YDL147W	TRK1	P12685	1235 aa		8.18	□□□□□ -1.1
RPN5	YDL147W	PAM1	P37304	830 aa	Known RBP	8.17	□□□□□ -1.1
RPN5	YDL147W	GLO3	P38682	493 aa	Known RBP	8.17	□□□□□ -1.1
RPN5	YDL147W	BOL3	P39724	118 aa		8.17	□□□□□ -1.1

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms