RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W FIG4P42837 879 aa7.56□□□□□ -1.2
PTC1YDL006W FRA1Q07825 749 aa7.56□□□□□ -1.2
PTC1YDL006W CPS1P27614 576 aa7.54□□□□□ -1.2
PTC1YDL006W VRP1P37370 817 aa7.54□□□□□ -1.2
PTC1YDL006W ATG3P40344 310 aa7.54□□□□□ -1.2
PTC1YDL006W STE20Q03497 939 aaKnown RBP7.54□□□□□ -1.2
PTC1YDL006W YPR084WQ06821 456 aa7.54□□□□□ -1.2
PTC1YDL006W SGS1P35187 1447 aa7.53□□□□□ -1.2
PTC1YDL006W VAC17P25591 423 aa7.53□□□□□ -1.2
PTC1YDL006W BCK2P33306 851 aa7.52□□□□□ -1.21
PTC1YDL006W PEP12P32854 288 aa7.51□□□□□ -1.21
PTC1YDL006W GEF1P37020 779 aa7.51□□□□□ -1.21
PTC1YDL006W EMP47P43555 445 aa7.51□□□□□ -1.21
PTC1YDL006W UTP13Q05946 817 aaKnown RBP7.51□□□□□ -1.21
PTC1YDL006W MON2P48563 1636 aaPredicted RBP7.51□□□□□ -1.21
PTC1YDL006W RDS2P19541 446 aaKnown RBP7.5□□□□□ -1.21
PTC1YDL006W APL6P46682 809 aa7.49□□□□□ -1.21
PTC1YDL006W INO80P53115 1489 aa7.49□□□□□ -1.21
PTC1YDL006W ISF1P32488 338 aa7.48□□□□□ -1.21
PTC1YDL006W SDH2P21801 266 aa7.47□□□□□ -1.21
PTC1YDL006W ENV9Q08651 330 aa7.47□□□□□ -1.21
PTC1YDL006W YEL077CQ3E7X8 1277 aa7.47□□□□□ -1.21
PTC1YDL006W TGL4P36165 910 aa7.46□□□□□ -1.22
PTC1YDL006W XDJ1P39102 459 aa7.46□□□□□ -1.22
PTC1YDL006W PUP1P25043 261 aa7.45□□□□□ -1.22
PTC1YDL006W NOB1Q08444 459 aaKnown RBP7.45□□□□□ -1.22
PTC1YDL006W BDP1P46678 594 aa7.44□□□□□ -1.22
PTC1YDL006W SYH1Q02875 849 aaKnown RBP7.43□□□□□ -1.22
PTC1YDL006W KIP2P28743 706 aa7.42□□□□□ -1.22
PTC1YDL006W IXR1P33417 597 aa7.42□□□□□ -1.22
PTC1YDL006W GAL2P13181 574 aa7.41□□□□□ -1.22
PTC1YDL006W CST6P40535 587 aa7.41□□□□□ -1.22
PTC1YDL006W RPL34AP87262 121 aaPredicted RBP7.41□□□□□ -1.22
PTC1YDL006W SOH1P38633 127 aa7.4□□□□□ -1.22
PTC1YDL006W TCB3Q03640 1545 aaKnown RBP7.4□□□□□ -1.22
PTC1YDL006W FRK1Q03002 865 aaPredicted RBP7.39□□□□□ -1.23
PTC1YDL006W AMS1P22855 1083 aa7.38□□□□□ -1.23
PTC1YDL006W PHO87P25360 923 aa7.38□□□□□ -1.23
PTC1YDL006W EMW1P42842 904 aaKnown RBP7.38□□□□□ -1.23
PTC1YDL006W HAP4P14064 554 aa7.37□□□□□ -1.23
PTC1YDL006W KTR7P40504 517 aa7.37□□□□□ -1.23
PTC1YDL006W YML083CQ04526 418 aa7.37□□□□□ -1.23
PTC1YDL006W PUS5Q06244 254 aa7.37□□□□□ -1.23
PTC1YDL006W ATG20Q07528 640 aa7.37□□□□□ -1.23
PTC1YDL006W MRT4P33201 236 aaKnown RBP7.36□□□□□ -1.23
PTC1YDL006W YFL034WP43564 1073 aa7.36□□□□□ -1.23
PTC1YDL006W ECM23Q02710 187 aa7.36□□□□□ -1.23
PTC1YDL006W CDC3P32457 520 aaKnown RBP7.35□□□□□ -1.23
PTC1YDL006W HED1Q03937 162 aa7.35□□□□□ -1.23
PTC1YDL006W ISR1Q06098 443 aaKnown RBP7.35□□□□□ -1.23
PTC1YDL006W RTT106P40161 455 aa7.34□□□□□ -1.23
PTC1YDL006W GAS4Q08271 471 aa7.34□□□□□ -1.23
PTC1YDL006W TSC13Q99190 310 aa7.34□□□□□ -1.23
PTC1YDL006W HAL5P38970 855 aaKnown RBP7.33□□□□□ -1.24
PTC1YDL006W SLX8P40072 274 aa7.33□□□□□ -1.24
PTC1YDL006W FBP26P32604 452 aa7.32□□□□□ -1.24
PTC1YDL006W SPT2P06843 333 aaPredicted RBP7.31□□□□□ -1.24
PTC1YDL006W UBX7P38349 436 aa7.31□□□□□ -1.24
PTC1YDL006W ACS2P52910 683 aaKnown RBP7.31□□□□□ -1.24
PTC1YDL006W PUF6Q04373 656 aaKnown RBP7.31□□□□□ -1.24
PTC1YDL006W ITT1Q04638 464 aa7.31□□□□□ -1.24
PTC1YDL006W RPP2BP02400 110 aaKnown RBP7.3□□□□□ -1.24
PTC1YDL006W MKS1P34072 584 aa7.3□□□□□ -1.24
PTC1YDL006W AIM9P40053 627 aaKnown RBP7.3□□□□□ -1.24
PTC1YDL006W APP1P53933 587 aa7.3□□□□□ -1.24
PTC1YDL006W ISU1Q03020 165 aa7.3□□□□□ -1.24
PTC1YDL006W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
PTC1YDL006W MIP1P15801 1254 aa7.29□□□□□ -1.24
PTC1YDL006W YBL086CP38177 466 aa7.29□□□□□ -1.24
PTC1YDL006W ROM1P53046 1155 aa7.29□□□□□ -1.24
PTC1YDL006W YML020WQ03722 664 aa7.29□□□□□ -1.24
PTC1YDL006W HDA3Q06623 655 aa7.29□□□□□ -1.24
PTC1YDL006W NOP8Q08287 484 aaPredicted RBP7.29□□□□□ -1.24
PTC1YDL006W STE6P12866 1290 aa7.27□□□□□ -1.25
PTC1YDL006W PDI1P17967 522 aaKnown RBP7.27□□□□□ -1.25
PTC1YDL006W UBP1P25037 809 aa7.27□□□□□ -1.25
PTC1YDL006W UTR2P32623 467 aa7.27□□□□□ -1.25
PTC1YDL006W TY1B-DR4Q07793 1604 aa7.27□□□□□ -1.25
PTC1YDL006W CWC15Q03772 175 aaKnown RBP7.26□□□□□ -1.25
PTC1YDL006W VAN1P23642 535 aa7.25□□□□□ -1.25
PTC1YDL006W TRS33Q99394 268 aa7.25□□□□□ -1.25
PTC1YDL006W CDC4P07834 779 aa7.24□□□□□ -1.25
PTC1YDL006W TBS1P38114 1094 aa7.24□□□□□ -1.25
PTC1YDL006W RAS1P01119 309 aa7.23□□□□□ -1.25
PTC1YDL006W NTH2P35172 780 aa7.23□□□□□ -1.25
PTC1YDL006W SSF1P38789 453 aaPredicted RBP7.23□□□□□ -1.25
PTC1YDL006W BDS1Q08347 646 aa7.23□□□□□ -1.25
PTC1YDL006W MET32Q12041 191 aa7.23□□□□□ -1.25
PTC1YDL006W RPS6AP0CX37 236 aaKnown RBP7.22□□□□□ -1.25
PTC1YDL006W RPS6BP0CX38 236 aaPredicted RBP7.22□□□□□ -1.25
PTC1YDL006W SRS2P12954 1174 aa7.22□□□□□ -1.25
PTC1YDL006W DFG5Q05031 458 aa7.22□□□□□ -1.25
PTC1YDL006W DPS1P04802 557 aaKnown RBP7.21□□□□□ -1.26
PTC1YDL006W CYT1P07143 309 aa7.21□□□□□ -1.26
PTC1YDL006W SWI5P08153 709 aa7.21□□□□□ -1.26
PTC1YDL006W CLA4P48562 842 aa7.21□□□□□ -1.26
PTC1YDL006W MSB3P48566 633 aaPredicted RBP7.21□□□□□ -1.26
PTC1YDL006W SWR1Q05471 1514 aa7.21□□□□□ -1.26
PTC1YDL006W AFT1P22149 690 aa7.2□□□□□ -1.26
PTC1YDL006W SLD2P34252 453 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms