RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W SPA2P23201 1466 aaKnown RBP4.02□□□□□ -1.77
SPB1YCL054W SUP45P12385 437 aaKnown RBP4.01□□□□□ -1.77
SPB1YCL054W PAC1P39946 494 aaKnown RBP4.01□□□□□ -1.77
SPB1YCL054W FPK1P53739 893 aa4.01□□□□□ -1.77
SPB1YCL054W SCJ1P25303 377 aa4.01□□□□□ -1.77
SPB1YCL054W HST2P53686 357 aa4.01□□□□□ -1.77
SPB1YCL054W YML083CQ04526 418 aa4.01□□□□□ -1.77
SPB1YCL054W PUS5Q06244 254 aa4.01□□□□□ -1.77
SPB1YCL054W RTG2P32608 588 aaKnown RBP4□□□□□ -1.77
SPB1YCL054W TUB4P53378 473 aa4□□□□□ -1.77
SPB1YCL054W YNL108CP53929 270 aa4□□□□□ -1.77
SPB1YCL054W TBF1Q02457 562 aa4□□□□□ -1.77
SPB1YCL054W SEN54Q02825 467 aaPredicted RBP4□□□□□ -1.77
SPB1YCL054W SYH1Q02875 849 aaKnown RBP4□□□□□ -1.77
SPB1YCL054W YMR196WQ04336 1088 aa4□□□□□ -1.77
SPB1YCL054W ERF2Q06551 359 aa4□□□□□ -1.77
SPB1YCL054W PUP1P25043 261 aa4□□□□□ -1.77
SPB1YCL054W YBL036CP38197 257 aa4□□□□□ -1.77
SPB1YCL054W YPR204WQ08995 1032 aa4□□□□□ -1.77
SPB1YCL054W MET32Q12041 191 aa4□□□□□ -1.77
SPB1YCL054W RAD59Q12223 238 aa4□□□□□ -1.77
SPB1YCL054W UGA3P26370 528 aa3.99□□□□□ -1.77
SPB1YCL054W YJU3P28321 313 aa3.99□□□□□ -1.77
SPB1YCL054W ESS1P22696 170 aa3.99□□□□□ -1.77
SPB1YCL054W RSC30P38781 883 aa3.99□□□□□ -1.77
SPB1YCL054W MRX10Q05648 414 aa3.99□□□□□ -1.77
SPB1YCL054W KIP2P28743 706 aa3.98□□□□□ -1.77
SPB1YCL054W RRD1P40454 393 aaKnown RBP3.98□□□□□ -1.77
SPB1YCL054W YJR115WP47152 169 aa3.98□□□□□ -1.77
SPB1YCL054W SIT4P20604 311 aa3.98□□□□□ -1.77
SPB1YCL054W YDJ1P25491 409 aaKnown RBP3.98□□□□□ -1.77
SPB1YCL054W SSF1P38789 453 aaPredicted RBP3.98□□□□□ -1.77
SPB1YCL054W CSE4P36012 229 aa3.97□□□□□ -1.77
SPB1YCL054W ENO1P00924 437 aaKnown RBP3.97□□□□□ -1.77
SPB1YCL054W ENO2P00925 437 aaKnown RBP3.97□□□□□ -1.77
SPB1YCL054W MOD5P07884 428 aa3.97□□□□□ -1.77
SPB1YCL054W RTT106P40161 455 aa3.97□□□□□ -1.77
SPB1YCL054W PKH3Q03306 898 aaPredicted RBP3.97□□□□□ -1.77
SPB1YCL054W RPL34BP40525 121 aaKnown RBP3.96□□□□□ -1.77
SPB1YCL054W ALR1Q08269 859 aa3.96□□□□□ -1.77
SPB1YCL054W MMP1Q12372 583 aa3.96□□□□□ -1.77
SPB1YCL054W PAM1P37304 830 aaKnown RBP3.96□□□□□ -1.78
SPB1YCL054W RIM21P48565 533 aa3.96□□□□□ -1.78
SPB1YCL054W MSB3P48566 633 aaPredicted RBP3.96□□□□□ -1.78
SPB1YCL054W CDC3P32457 520 aaKnown RBP3.95□□□□□ -1.78
SPB1YCL054W HXT10P43581 546 aa3.95□□□□□ -1.78
SPB1YCL054W HIR3P47171 1648 aa3.95□□□□□ -1.78
SPB1YCL054W RDS2P19541 446 aaKnown RBP3.94□□□□□ -1.78
SPB1YCL054W SLY41P22215 453 aa3.94□□□□□ -1.78
SPB1YCL054W TPD3P31383 635 aa3.94□□□□□ -1.78
SPB1YCL054W PEP12P32854 288 aa3.94□□□□□ -1.78
SPB1YCL054W IXR1P33417 597 aa3.94□□□□□ -1.78
SPB1YCL054W RPL34AP87262 121 aaPredicted RBP3.94□□□□□ -1.78
SPB1YCL054W AGE1Q04412 482 aa3.94□□□□□ -1.78
SPB1YCL054W MAK16P10962 306 aaPredicted RBP3.93□□□□□ -1.78
SPB1YCL054W TGL4P36165 910 aa3.93□□□□□ -1.78
SPB1YCL054W YGR035CP53222 116 aa3.93□□□□□ -1.78
SPB1YCL054W CAF120P53836 1060 aa3.93□□□□□ -1.78
SPB1YCL054W HAT1Q12341 374 aa3.93□□□□□ -1.78
SPB1YCL054W RRN6P32786 894 aa3.92□□□□□ -1.78
SPB1YCL054W PTK2P47116 818 aaKnown RBP3.92□□□□□ -1.78
SPB1YCL054W ECM5Q03214 1411 aa3.92□□□□□ -1.78
SPB1YCL054W PUS6P53294 404 aa3.92□□□□□ -1.78
SPB1YCL054W PDC1P06169 563 aaKnown RBP3.91□□□□□ -1.78
SPB1YCL054W ARG8P18544 423 aa3.91□□□□□ -1.78
SPB1YCL054W SLD2P34252 453 aa3.91□□□□□ -1.78
SPB1YCL054W RPA14P50106 137 aa3.91□□□□□ -1.78
SPB1YCL054W IOC4Q04213 475 aa3.91□□□□□ -1.78
SPB1YCL054W HEM3P28789 327 aa3.91□□□□□ -1.78
SPB1YCL054W SCW11P53189 542 aa3.91□□□□□ -1.78
SPB1YCL054W MTC5Q03897 1148 aa3.91□□□□□ -1.78
SPB1YCL054W NUP85P46673 744 aa3.9□□□□□ -1.78
SPB1YCL054W ARG82P07250 355 aa3.9□□□□□ -1.79
SPB1YCL054W MIP1P15801 1254 aa3.9□□□□□ -1.79
SPB1YCL054W NAP1P25293 417 aaKnown RBP3.9□□□□□ -1.79
SPB1YCL054W SPT5P27692 1063 aaKnown RBP3.9□□□□□ -1.79
SPB1YCL054W GLY1P37303 387 aaKnown RBP3.9□□□□□ -1.79
SPB1YCL054W TPS3P38426 1054 aaKnown RBP3.9□□□□□ -1.79
SPB1YCL054W IPL1P38991 367 aa3.9□□□□□ -1.79
SPB1YCL054W SNU71P53207 620 aaKnown RBP3.9□□□□□ -1.79
SPB1YCL054W YDL176WQ12027 708 aa3.9□□□□□ -1.79
SPB1YCL054W AIM44Q99299 758 aa3.9□□□□□ -1.79
SPB1YCL054W XRN1P22147 1528 aaKnown RBP3.9□□□□□ -1.79
SPB1YCL054W BUD4P47136 1447 aa3.89□□□□□ -1.79
SPB1YCL054W SIS2P36024 562 aa3.89□□□□□ -1.79
SPB1YCL054W YDL206WQ12424 762 aa3.89□□□□□ -1.79
SPB1YCL054W RRP15Q06511 250 aaPredicted RBP3.89□□□□□ -1.79
SPB1YCL054W TRL1P09880 827 aaKnown RBP3.88□□□□□ -1.79
SPB1YCL054W ACO2P39533 789 aa3.88□□□□□ -1.79
SPB1YCL054W OPT2Q06593 877 aa3.88□□□□□ -1.79
SPB1YCL054W YPR097WQ06839 1073 aa3.88□□□□□ -1.79
SPB1YCL054W NOP7P53261 605 aaKnown RBP3.88□□□□□ -1.79
SPB1YCL054W LSC2P53312 427 aa3.88□□□□□ -1.79
SPB1YCL054W THO2P53552 1597 aaKnown RBP3.88□□□□□ -1.79
SPB1YCL054W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SPB1YCL054W ALD2P47771 506 aa3.87□□□□□ -1.79
SPB1YCL054W SSN2P38931 1420 aa3.87□□□□□ -1.79
SPB1YCL054W TRM1P15565 570 aaKnown RBP3.87□□□□□ -1.79
SPB1YCL054W UBP2Q01476 1272 aa3.87□□□□□ -1.79
SPB1YCL054W ECM23Q02710 187 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms