RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W GAP1P19145 602 aaPredicted RBP8.3□□□□□ -1.08
SHM1YBR263W SAS4Q04003 481 aa8.29□□□□□ -1.08
SHM1YBR263W SSM4P40318 1319 aa8.28□□□□□ -1.08
SHM1YBR263W SDH2P21801 266 aa8.28□□□□□ -1.08
SHM1YBR263W YRR1Q12172 810 aa8.28□□□□□ -1.08
SHM1YBR263W AMS1P22855 1083 aa8.26□□□□□ -1.09
SHM1YBR263W VPS70P47161 811 aa8.26□□□□□ -1.09
SHM1YBR263W PEX21P50091 288 aa8.26□□□□□ -1.09
SHM1YBR263W CSC1Q06538 782 aa8.26□□□□□ -1.09
SHM1YBR263W BUD20Q08004 166 aaPredicted RBP8.26□□□□□ -1.09
SHM1YBR263W TFB4Q12004 338 aa8.26□□□□□ -1.09
SHM1YBR263W BUD21Q08492 214 aaPredicted RBP8.25□□□□□ -1.09
SHM1YBR263W YOR093CQ12275 1648 aa8.23□□□□□ -1.09
SHM1YBR263W ORC6P38826 435 aa8.23□□□□□ -1.09
SHM1YBR263W STR2P47164 639 aa8.22□□□□□ -1.09
SHM1YBR263W TUM1Q08686 304 aaKnown RBP8.22□□□□□ -1.09
SHM1YBR263W COX6P00427 148 aa8.2□□□□□ -1.1
SHM1YBR263W PRT1P06103 763 aaKnown RBP8.2□□□□□ -1.1
SHM1YBR263W ISM1P48526 1002 aa8.2□□□□□ -1.1
SHM1YBR263W MAK21Q12176 1025 aaKnown RBP8.2□□□□□ -1.1
SHM1YBR263W YAP3P38749 330 aa8.19□□□□□ -1.1
SHM1YBR263W NUD1P32336 851 aa8.19□□□□□ -1.1
SHM1YBR263W YEL077CQ3E7X8 1277 aa8.17□□□□□ -1.1
SHM1YBR263W MRF1P30775 413 aaPredicted RBP8.16□□□□□ -1.1
SHM1YBR263W TRK1P12685 1235 aa8.15□□□□□ -1.1
SHM1YBR263W MVP1P40959 511 aaKnown RBP8.15□□□□□ -1.1
SHM1YBR263W URN1Q06525 465 aaKnown RBP8.15□□□□□ -1.1
SHM1YBR263W DNF3Q12674 1656 aa8.13□□□□□ -1.11
SHM1YBR263W VMR1P38735 1592 aa8.12□□□□□ -1.11
SHM1YBR263W NPL4P33755 580 aa8.12□□□□□ -1.11
SHM1YBR263W IPL1P38991 367 aa8.12□□□□□ -1.11
SHM1YBR263W NUP188P52593 1655 aaKnown RBP8.11□□□□□ -1.11
SHM1YBR263W TY1A-DR4O74302 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-HP0C2I4 478 aaKnown RBP8.1□□□□□ -1.11
SHM1YBR263W TY1A-AP0CX57 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-PR1P0CX58 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-ORP0CX59 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-PR2P0CX60 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-DR5P0CX65 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-ER2P0CX66 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-GR3P0CX67 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-LR1P0CX68 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-MR2P0CX69 440 aa8.1□□□□□ -1.11
SHM1YBR263W RGR1P19263 1082 aa8.1□□□□□ -1.11
SHM1YBR263W TYS1P36421 394 aaKnown RBP8.1□□□□□ -1.11
SHM1YBR263W TY1A-JR2P47099 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-DR1Q03856 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-ML1Q04706 440 aaKnown RBP8.1□□□□□ -1.11
SHM1YBR263W TY1A-BRQ12217 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-NL2Q12470 440 aa8.1□□□□□ -1.11
SHM1YBR263W TY1A-GR2Q12485 440 aa8.1□□□□□ -1.11
SHM1YBR263W SEC2P17065 759 aa8.09□□□□□ -1.11
SHM1YBR263W YPR109WQ06104 294 aa8.09□□□□□ -1.11
SHM1YBR263W GCD11P32481 527 aaKnown RBP8.08□□□□□ -1.12
SHM1YBR263W GCN2P15442 1659 aa8.08□□□□□ -1.12
SHM1YBR263W ERG12P07277 443 aa8.07□□□□□ -1.12
SHM1YBR263W PDR5P33302 1511 aaKnown RBP8.07□□□□□ -1.12
SHM1YBR263W IML1P47170 1584 aa8.07□□□□□ -1.12
SHM1YBR263W PDR11P40550 1411 aa8.07□□□□□ -1.12
SHM1YBR263W MAK10Q02197 733 aa8.06□□□□□ -1.12
SHM1YBR263W PBS2P08018 668 aa8.04□□□□□ -1.12
SHM1YBR263W CST6P40535 587 aa8.04□□□□□ -1.12
SHM1YBR263W HAP1P0CE41 1502 aa8.04□□□□□ -1.12
SHM1YBR263W SPT16P32558 1035 aaKnown RBP8.02□□□□□ -1.13
SHM1YBR263W LAM6Q08001 693 aa8□□□□□ -1.13
SHM1YBR263W RGA1P39083 1007 aa7.99□□□□□ -1.13
SHM1YBR263W RRN7P40992 514 aa7.99□□□□□ -1.13
SHM1YBR263W CLA4P48562 842 aa7.99□□□□□ -1.13
SHM1YBR263W AIR1P40507 360 aaKnown RBP7.98□□□□□ -1.13
SHM1YBR263W PSE1P32337 1089 aaKnown RBP7.97□□□□□ -1.13
SHM1YBR263W ERF2Q06551 359 aa7.97□□□□□ -1.13
SHM1YBR263W RAV1P47104 1357 aa7.97□□□□□ -1.13
SHM1YBR263W KEX2P13134 814 aa7.96□□□□□ -1.13
SHM1YBR263W PAF1P38351 445 aa7.96□□□□□ -1.13
SHM1YBR263W FRK1Q03002 865 aaPredicted RBP7.94□□□□□ -1.14
SHM1YBR263W PAT1P25644 796 aaKnown RBP7.94□□□□□ -1.14
SHM1YBR263W RTC1Q08281 1341 aa7.93□□□□□ -1.14
SHM1YBR263W BDP1P46678 594 aa7.93□□□□□ -1.14
SHM1YBR263W NOP7P53261 605 aaKnown RBP7.93□□□□□ -1.14
SHM1YBR263W MAM3Q12296 706 aa7.93□□□□□ -1.14
SHM1YBR263W RGA2Q06407 1009 aa7.92□□□□□ -1.14
SHM1YBR263W DSF2P38213 736 aa7.9□□□□□ -1.14
SHM1YBR263W BRE2P43132 505 aa7.9□□□□□ -1.14
SHM1YBR263W USO1P25386 1790 aa7.9□□□□□ -1.15
SHM1YBR263W CLB5P30283 435 aa7.89□□□□□ -1.15
SHM1YBR263W DMA1P38823 416 aa7.89□□□□□ -1.15
SHM1YBR263W KRE5P22023 1365 aa7.88□□□□□ -1.15
SHM1YBR263W TY1B-NL2Q99337 1749 aaKnown RBP7.88□□□□□ -1.15
SHM1YBR263W CDC4P07834 779 aa7.87□□□□□ -1.15
SHM1YBR263W PAC1P39946 494 aaKnown RBP7.87□□□□□ -1.15
SHM1YBR263W IES2P40154 320 aa7.87□□□□□ -1.15
SHM1YBR263W YMR196WQ04336 1088 aa7.87□□□□□ -1.15
SHM1YBR263W NUP192P47054 1683 aa7.87□□□□□ -1.15
SHM1YBR263W BCK1Q01389 1478 aa7.87□□□□□ -1.15
SHM1YBR263W THI12P42883 340 aa7.87□□□□□ -1.15
SHM1YBR263W THI5P43534 340 aa7.87□□□□□ -1.15
SHM1YBR263W THI11P47183 340 aa7.87□□□□□ -1.15
SHM1YBR263W THI13Q07748 340 aa7.87□□□□□ -1.15
SHM1YBR263W CFT1Q06632 1357 aaKnown RBP7.86□□□□□ -1.15
SHM1YBR263W ALD4P46367 519 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms