RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
CDH8-213ENST00000584966 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
CDH8-213ENST00000584966 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
CDH8-213ENST00000584966 IFT140Q96RY7 1462 aa9.72□□□□□ -0.85
CDH8-213ENST00000584966 RAD54L2Q9Y4B4 1467 aa9.72□□□□□ -0.85
CDH8-213ENST00000584966 PTCD2Q8WV60 388 aaKnown RBP9.71□□□□□ -0.86
CDH8-213ENST00000584966 ZNF608Q9ULD9 1512 aaPredicted RBP9.71□□□□□ -0.86
CDH8-213ENST00000584966 KCNK17Q96T54 332 aa9.7□□□□□ -0.86
CDH8-213ENST00000584966 SOGA1O94964 1423 aa9.7□□□□□ -0.86
CDH8-213ENST00000584966 RGS20O76081 388 aa9.69□□□□□ -0.86
CDH8-213ENST00000584966 EIF4G3O43432 1585 aaKnown RBP9.67□□□□□ -0.86
CDH8-213ENST00000584966 PPP1R37O75864 691 aa9.67□□□□□ -0.86
CDH8-213ENST00000584966 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
CDH8-213ENST00000584966 ABCA10Q8WWZ4 1543 aa9.66□□□□□ -0.86
CDH8-213ENST00000584966 VPS9D1Q9Y2B5 631 aa9.66□□□□□ -0.86
CDH8-213ENST00000584966 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
CDH8-213ENST00000584966 AQRO60306 1485 aaKnown RBP eCLIP9.65□□□□□ -0.87
CDH8-213ENST00000584966 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
CDH8-213ENST00000584966 A0A0G2JS52 829 aa9.64□□□□□ -0.87
CDH8-213ENST00000584966 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
CDH8-213ENST00000584966 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
CDH8-213ENST00000584966 TDRD9Q8NDG6 1382 aaKnown RBP9.63□□□□□ -0.87
CDH8-213ENST00000584966 THSD4Q6ZMP0 1018 aa9.62□□□□□ -0.87
CDH8-213ENST00000584966 TBC1D12O60347 775 aa9.61□□□□□ -0.87
CDH8-213ENST00000584966 FOXK1P85037 733 aa9.61□□□□□ -0.87
CDH8-213ENST00000584966 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
CDH8-213ENST00000584966 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
CDH8-213ENST00000584966 CHD1O14646 1710 aa9.57□□□□□ -0.88
CDH8-213ENST00000584966 ECM2O94769 699 aaPredicted RBP9.57□□□□□ -0.88
CDH8-213ENST00000584966 DSG2Q14126 1118 aa9.57□□□□□ -0.88
CDH8-213ENST00000584966 WNT2BQ93097 391 aa9.57□□□□□ -0.88
CDH8-213ENST00000584966 RUSC2Q8N2Y8 1516 aa9.56□□□□□ -0.88
CDH8-213ENST00000584966 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
CDH8-213ENST00000584966 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
CDH8-213ENST00000584966 BHMG1C9JSJ3 638 aaPredicted RBP9.55□□□□□ -0.88
CDH8-213ENST00000584966 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
CDH8-213ENST00000584966 ERICH3Q5RHP9 1530 aa9.55□□□□□ -0.88
CDH8-213ENST00000584966 SNAPC4Q5SXM2 1469 aa9.54□□□□□ -0.88
CDH8-213ENST00000584966 Q6ZNB5 142 aa9.54□□□□□ -0.88
CDH8-213ENST00000584966 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
CDH8-213ENST00000584966 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
CDH8-213ENST00000584966 MRPL50Q8N5N7 158 aaKnown RBP9.53□□□□□ -0.88
CDH8-213ENST00000584966 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
CDH8-213ENST00000584966 IGF1RP08069 1367 aa9.52□□□□□ -0.88
CDH8-213ENST00000584966 RGL2O15211 777 aa9.52□□□□□ -0.89
CDH8-213ENST00000584966 ADAMTS12P58397 1594 aa9.52□□□□□ -0.89
CDH8-213ENST00000584966 KIF27Q86VH2 1401 aa9.52□□□□□ -0.89
CDH8-213ENST00000584966 UPF1Q92900 1129 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH8-213ENST00000584966 PTPREP23469 700 aa9.5□□□□□ -0.89
CDH8-213ENST00000584966 ZBED2Q9BTP6 218 aa9.5□□□□□ -0.89
CDH8-213ENST00000584966 CUL7Q14999 1698 aa9.49□□□□□ -0.89
CDH8-213ENST00000584966 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
CDH8-213ENST00000584966 PLCB2Q00722 1185 aa9.48□□□□□ -0.89
CDH8-213ENST00000584966 OXER1Q8TDS5 423 aa9.48□□□□□ -0.89
CDH8-213ENST00000584966 FHAD1B1AJZ9 1412 aa9.48□□□□□ -0.89
CDH8-213ENST00000584966 PKD2Q13563 968 aa9.46□□□□□ -0.9
CDH8-213ENST00000584966 GRIN2AQ12879 1464 aa9.46□□□□□ -0.9
CDH8-213ENST00000584966 FOSBP53539 338 aa9.45□□□□□ -0.9
CDH8-213ENST00000584966 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
CDH8-213ENST00000584966 CHMP7Q8WUX9 453 aaPredicted RBP9.44□□□□□ -0.9
CDH8-213ENST00000584966 CARMIL1Q5VZK9 1371 aa9.44□□□□□ -0.9
CDH8-213ENST00000584966 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
CDH8-213ENST00000584966 CEP170Q5SW79 1584 aa9.44□□□□□ -0.9
CDH8-213ENST00000584966 DNAJC5Q9H3Z4 198 aa9.43□□□□□ -0.9
CDH8-213ENST00000584966 PRXQ9BXM0 1461 aa9.42□□□□□ -0.9
CDH8-213ENST00000584966 NUP160Q12769 1436 aa9.42□□□□□ -0.9
CDH8-213ENST00000584966 EEA1Q15075 1411 aa9.41□□□□□ -0.9
CDH8-213ENST00000584966 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
CDH8-213ENST00000584966 ADAM33Q9BZ11 813 aa9.4□□□□□ -0.9
CDH8-213ENST00000584966 RAPGEF2Q9Y4G8 1499 aa9.4□□□□□ -0.91
CDH8-213ENST00000584966 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
CDH8-213ENST00000584966 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
CDH8-213ENST00000584966 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
CDH8-213ENST00000584966 BCAMP50895 628 aa9.38□□□□□ -0.91
CDH8-213ENST00000584966 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
CDH8-213ENST00000584966 CTTNBP2Q8WZ74 1663 aa9.38□□□□□ -0.91
CDH8-213ENST00000584966 FAM9AQ8IZU1 332 aaPredicted RBP9.37□□□□□ -0.91
CDH8-213ENST00000584966 KIF21BO75037 1637 aa9.37□□□□□ -0.91
CDH8-213ENST00000584966 PPP1R15BQ5SWA1 713 aa9.36□□□□□ -0.91
CDH8-213ENST00000584966 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
CDH8-213ENST00000584966 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
CDH8-213ENST00000584966 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
CDH8-213ENST00000584966 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
CDH8-213ENST00000584966 ANO8Q9HCE9 1232 aaPredicted RBP9.35□□□□□ -0.91
CDH8-213ENST00000584966 ERCC6L2Q5T890 1561 aa9.34□□□□□ -0.91
CDH8-213ENST00000584966 LCE2BO14633 110 aa9.34□□□□□ -0.91
CDH8-213ENST00000584966 EVI5O60447 810 aa9.34□□□□□ -0.91
CDH8-213ENST00000584966 KIAA0586Q9BVV6 1533 aa9.34□□□□□ -0.91
CDH8-213ENST00000584966 KCNC4Q03721 635 aa9.33□□□□□ -0.92
CDH8-213ENST00000584966 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
CDH8-213ENST00000584966 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
CDH8-213ENST00000584966 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
CDH8-213ENST00000584966 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
CDH8-213ENST00000584966 IQGAP2Q13576 1575 aa9.32□□□□□ -0.92
CDH8-213ENST00000584966 SOWAHBA6NEL2 793 aa9.31□□□□□ -0.92
CDH8-213ENST00000584966 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
CDH8-213ENST00000584966 GFRA3O60609 400 aa9.31□□□□□ -0.92
CDH8-213ENST00000584966 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
CDH8-213ENST00000584966 WBP1LQ9NX94 342 aa9.31□□□□□ -0.92
CDH8-213ENST00000584966 HAP1P54257 671 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms