RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 IGF1RP08069 1367 aa10.1□□□□□ -0.79
HERC2-211ENST00000569335 TOPBP1Q92547 1522 aa10.09□□□□□ -0.79
HERC2-211ENST00000569335 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.794e-6■■□□□ 13.9
HERC2-211ENST00000569335 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
HERC2-211ENST00000569335 FAM205CA6NFA0 338 aa10.08□□□□□ -0.8
HERC2-211ENST00000569335 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
HERC2-211ENST00000569335 PCDHGA4Q9Y5G9 962 aa10.08□□□□□ -0.8
HERC2-211ENST00000569335 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
HERC2-211ENST00000569335 PTCD2Q8WV60 388 aaKnown RBP10.07□□□□□ -0.8
HERC2-211ENST00000569335 CUX2O14529 1486 aa10.06□□□□□ -0.8
HERC2-211ENST00000569335 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
HERC2-211ENST00000569335 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
HERC2-211ENST00000569335 POLA1P09884 1462 aaPredicted RBP10.05□□□□□ -0.8
HERC2-211ENST00000569335 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
HERC2-211ENST00000569335 ERBB3P21860 1342 aa10.04□□□□□ -0.8
HERC2-211ENST00000569335 ARAP1Q96P48 1450 aa10.04□□□□□ -0.8
HERC2-211ENST00000569335 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
HERC2-211ENST00000569335 NUDT7P0C024 238 aa10.03□□□□□ -0.8
HERC2-211ENST00000569335 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
HERC2-211ENST00000569335 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
HERC2-211ENST00000569335 NESP48681 1621 aa10.03□□□□□ -0.8
HERC2-211ENST00000569335 CUL7Q14999 1698 aa10.02□□□□□ -0.8
HERC2-211ENST00000569335 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.8
HERC2-211ENST00000569335 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
HERC2-211ENST00000569335 MAP3K1Q13233 1512 aa10.02□□□□□ -0.81
HERC2-211ENST00000569335 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.81
HERC2-211ENST00000569335 TBC1D12O60347 775 aa10.01□□□□□ -0.81
HERC2-211ENST00000569335 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
HERC2-211ENST00000569335 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
HERC2-211ENST00000569335 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
HERC2-211ENST00000569335 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
HERC2-211ENST00000569335 ZNF316A6NFI3 1004 aaPredicted RBP9.99□□□□□ -0.81
HERC2-211ENST00000569335 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
HERC2-211ENST00000569335 ABCA5Q8WWZ7 1642 aa9.99□□□□□ -0.81
HERC2-211ENST00000569335 E2F4Q16254 413 aa9.98□□□□□ -0.81
HERC2-211ENST00000569335 PLSCR2Q9NRY7 297 aa9.98□□□□□ -0.81
HERC2-211ENST00000569335 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
HERC2-211ENST00000569335 ZNF687Q8N1G0 1237 aa9.96□□□□□ -0.82
HERC2-211ENST00000569335 LHX6Q9UPM6 363 aa9.96□□□□□ -0.82
HERC2-211ENST00000569335 RAD54L2Q9Y4B4 1467 aa9.95□□□□□ -0.82
HERC2-211ENST00000569335 EFCAB5A4FU69 1503 aa9.95□□□□□ -0.82
HERC2-211ENST00000569335 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
HERC2-211ENST00000569335 DPYSL4O14531 572 aa9.94□□□□□ -0.82
HERC2-211ENST00000569335 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
HERC2-211ENST00000569335 EVI5O60447 810 aa9.93□□□□□ -0.82
HERC2-211ENST00000569335 KDM2AQ9Y2K7 1162 aa9.93□□□□□ -0.82
HERC2-211ENST00000569335 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.82
HERC2-211ENST00000569335 MRC2Q9UBG0 1479 aa9.92□□□□□ -0.82
HERC2-211ENST00000569335 PSDA5PKW4 1024 aaPredicted RBP9.92□□□□□ -0.82
HERC2-211ENST00000569335 GAPVD1Q14C86 1478 aa9.91□□□□□ -0.82
HERC2-211ENST00000569335 FHAD1B1AJZ9 1412 aa9.91□□□□□ -0.82
HERC2-211ENST00000569335 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.82
HERC2-211ENST00000569335 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
HERC2-211ENST00000569335 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
HERC2-211ENST00000569335 WDR62O43379 1518 aa9.9□□□□□ -0.82
HERC2-211ENST00000569335 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.83
HERC2-211ENST00000569335 PBX2P40425 430 aa9.88□□□□□ -0.83
HERC2-211ENST00000569335 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
HERC2-211ENST00000569335 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
HERC2-211ENST00000569335 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
HERC2-211ENST00000569335 ARIH1Q9Y4X5 557 aaPredicted RBP9.87□□□□□ -0.83
HERC2-211ENST00000569335 TIAM1Q13009 1591 aa9.87□□□□□ -0.83
HERC2-211ENST00000569335 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
HERC2-211ENST00000569335 SAMD9Q5K651 1589 aa9.86□□□□□ -0.83
HERC2-211ENST00000569335 FYCO1Q9BQS8 1478 aa9.85□□□□□ -0.83
HERC2-211ENST00000569335 CFAP43Q8NDM7 1665 aa9.84□□□□□ -0.83
HERC2-211ENST00000569335 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
HERC2-211ENST00000569335 PDIA6Q15084 440 aa9.84□□□□□ -0.83
HERC2-211ENST00000569335 ZNF454Q8N9F8 522 aa9.84□□□□□ -0.83
HERC2-211ENST00000569335 FMN1Q68DA7 1419 aa9.83□□□□□ -0.84
HERC2-211ENST00000569335 FOSBP53539 338 aa9.83□□□□□ -0.84
HERC2-211ENST00000569335 MMRN1Q13201 1228 aa9.83□□□□□ -0.84
HERC2-211ENST00000569335 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
HERC2-211ENST00000569335 ARHGEF1Q92888 912 aaKnown RBP9.83□□□□□ -0.84
HERC2-211ENST00000569335 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
HERC2-211ENST00000569335 CLSPNQ9HAW4 1339 aa9.82□□□□□ -0.84
HERC2-211ENST00000569335 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
HERC2-211ENST00000569335 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
HERC2-211ENST00000569335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.82□□□□□ -0.84
HERC2-211ENST00000569335 GRIN2BQ13224 1484 aa9.82□□□□□ -0.84
HERC2-211ENST00000569335 LRRC9Q6ZRR7 1453 aa9.82□□□□□ -0.84
HERC2-211ENST00000569335 ADAMTS12P58397 1594 aa9.82□□□□□ -0.84
HERC2-211ENST00000569335 PBRM1Q86U86 1689 aa9.82□□□□□ -0.84
HERC2-211ENST00000569335 TDRD9Q8NDG6 1382 aaKnown RBP9.81□□□□□ -0.84
HERC2-211ENST00000569335 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
HERC2-211ENST00000569335 JPH4Q96JJ6 628 aa9.81□□□□□ -0.84
HERC2-211ENST00000569335 SNAPC4Q5SXM2 1469 aa9.8□□□□□ -0.84
HERC2-211ENST00000569335 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
HERC2-211ENST00000569335 KANK4Q5T7N3 995 aaPredicted RBP9.8□□□□□ -0.84
HERC2-211ENST00000569335 DDX12PQ92771 950 aa9.8□□□□□ -0.84
HERC2-211ENST00000569335 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
HERC2-211ENST00000569335 PTGER2P43116 358 aa9.79□□□□□ -0.84
HERC2-211ENST00000569335 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
HERC2-211ENST00000569335 PCDHGA10Q9Y5H3 936 aa9.79□□□□□ -0.84
HERC2-211ENST00000569335 CCNB3Q8WWL7 1395 aa9.78□□□□□ -0.84
HERC2-211ENST00000569335 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
HERC2-211ENST00000569335 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
HERC2-211ENST00000569335 PHF14O94880 888 aa9.77□□□□□ -0.85
HERC2-211ENST00000569335 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
HERC2-211ENST00000569335 UGGT2Q9NYU1 1516 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms