RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
HERC2-211ENST00000569335 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
HERC2-211ENST00000569335 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
HERC2-211ENST00000569335 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
HERC2-211ENST00000569335 FOXD1Q16676 465 aa17.99■□□□□ 0.47
HERC2-211ENST00000569335 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
HERC2-211ENST00000569335 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
HERC2-211ENST00000569335 ADRA2BP18089 450 aa16.96■□□□□ 0.31
HERC2-211ENST00000569335 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
HERC2-211ENST00000569335 MSH5O43196 834 aa16.76■□□□□ 0.27
HERC2-211ENST00000569335 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
HERC2-211ENST00000569335 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
HERC2-211ENST00000569335 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
HERC2-211ENST00000569335 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
HERC2-211ENST00000569335 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
HERC2-211ENST00000569335 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
HERC2-211ENST00000569335 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
HERC2-211ENST00000569335 KCNA4P22459 653 aa15.01□□□□□ -0.01
HERC2-211ENST00000569335 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
HERC2-211ENST00000569335 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
HERC2-211ENST00000569335 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
HERC2-211ENST00000569335 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
HERC2-211ENST00000569335 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
HERC2-211ENST00000569335 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
HERC2-211ENST00000569335 NISCHQ9Y2I1 1504 aa14.3□□□□□ -0.12
HERC2-211ENST00000569335 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
HERC2-211ENST00000569335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
HERC2-211ENST00000569335 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
HERC2-211ENST00000569335 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
HERC2-211ENST00000569335 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
HERC2-211ENST00000569335 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
HERC2-211ENST00000569335 ZBTB22O15209 634 aa13.82□□□□□ -0.2
HERC2-211ENST00000569335 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
HERC2-211ENST00000569335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
HERC2-211ENST00000569335 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
HERC2-211ENST00000569335 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
HERC2-211ENST00000569335 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
HERC2-211ENST00000569335 APLP2Q06481 763 aa13.67□□□□□ -0.22
HERC2-211ENST00000569335 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
HERC2-211ENST00000569335 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
HERC2-211ENST00000569335 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
HERC2-211ENST00000569335 CAPN15O75808 1086 aa13.57□□□□□ -0.24
HERC2-211ENST00000569335 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
HERC2-211ENST00000569335 DSG3P32926 999 aa13.5□□□□□ -0.25
HERC2-211ENST00000569335 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
HERC2-211ENST00000569335 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
HERC2-211ENST00000569335 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
HERC2-211ENST00000569335 ABCB7O75027 752 aa13.28□□□□□ -0.28
HERC2-211ENST00000569335 POLA2Q14181 598 aa13.16□□□□□ -0.3
HERC2-211ENST00000569335 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
HERC2-211ENST00000569335 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
HERC2-211ENST00000569335 FBLN2P98095 1184 aa12.79□□□□□ -0.36
HERC2-211ENST00000569335 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
HERC2-211ENST00000569335 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
HERC2-211ENST00000569335 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
HERC2-211ENST00000569335 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
HERC2-211ENST00000569335 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
HERC2-211ENST00000569335 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
HERC2-211ENST00000569335 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
HERC2-211ENST00000569335 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
HERC2-211ENST00000569335 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
HERC2-211ENST00000569335 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
HERC2-211ENST00000569335 POTEHQ6S545 545 aa12.43□□□□□ -0.42
HERC2-211ENST00000569335 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
HERC2-211ENST00000569335 CCDC180Q9P1Z9 1646 aa12.41□□□□□ -0.42
HERC2-211ENST00000569335 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
HERC2-211ENST00000569335 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
HERC2-211ENST00000569335 FKBP8Q14318 412 aa12.31□□□□□ -0.44
HERC2-211ENST00000569335 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
HERC2-211ENST00000569335 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
HERC2-211ENST00000569335 PIP4P2Q8N4L2 257 aa12.23□□□□□ -0.45
HERC2-211ENST00000569335 PROM2Q8N271 834 aa12.19□□□□□ -0.46
HERC2-211ENST00000569335 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
HERC2-211ENST00000569335 ZCCHC6Q5VYS8 1495 aaKnown RBP12.09□□□□□ -0.47
HERC2-211ENST00000569335 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
HERC2-211ENST00000569335 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
HERC2-211ENST00000569335 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
HERC2-211ENST00000569335 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.49
HERC2-211ENST00000569335 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
HERC2-211ENST00000569335 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
HERC2-211ENST00000569335 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
HERC2-211ENST00000569335 HAX1O00165 279 aa11.86□□□□□ -0.51
HERC2-211ENST00000569335 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
HERC2-211ENST00000569335 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
HERC2-211ENST00000569335 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
HERC2-211ENST00000569335 MIER1Q8N108 512 aa11.8□□□□□ -0.52
HERC2-211ENST00000569335 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
HERC2-211ENST00000569335 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
HERC2-211ENST00000569335 EVX2Q03828 476 aa11.75□□□□□ -0.53
HERC2-211ENST00000569335 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
HERC2-211ENST00000569335 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
HERC2-211ENST00000569335 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
HERC2-211ENST00000569335 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
HERC2-211ENST00000569335 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
HERC2-211ENST00000569335 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
HERC2-211ENST00000569335 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
HERC2-211ENST00000569335 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
HERC2-211ENST00000569335 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
HERC2-211ENST00000569335 CLCN6P51797 869 aa11.57□□□□□ -0.56
HERC2-211ENST00000569335 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms