RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
CDH1-203ENST00000561751 EIF4G3O43432 1585 aaKnown RBP10.04□□□□□ -0.8
CDH1-203ENST00000561751 PRDM2Q13029 1718 aa10.04□□□□□ -0.8
CDH1-203ENST00000561751 CYB5RLQ6IPT4 315 aa10.03□□□□□ -0.8
CDH1-203ENST00000561751 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
CDH1-203ENST00000561751 NOP58Q9Y2X3 529 aaKnown RBP10.03□□□□□ -0.8
CDH1-203ENST00000561751 GLIPR1L2Q4G1C9 344 aa10.02□□□□□ -0.81
CDH1-203ENST00000561751 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
CDH1-203ENST00000561751 TOPBP1Q92547 1522 aa10.01□□□□□ -0.81
CDH1-203ENST00000561751 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
CDH1-203ENST00000561751 MMRN1Q13201 1228 aa10□□□□□ -0.81
CDH1-203ENST00000561751 RTL5Q5HYW3 569 aaPredicted RBP10□□□□□ -0.81
CDH1-203ENST00000561751 CHD1O14646 1710 aa9.99□□□□□ -0.81
CDH1-203ENST00000561751 PKNOX2Q96KN3 472 aa9.99□□□□□ -0.81
CDH1-203ENST00000561751 RSPH6AQ9H0K4 717 aa9.99□□□□□ -0.81
CDH1-203ENST00000561751 PPP4R2Q9NY27 417 aa9.99□□□□□ -0.81
CDH1-203ENST00000561751 WASHC2CQ9Y4E1 1318 aa9.99□□□□□ -0.81
CDH1-203ENST00000561751 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
CDH1-203ENST00000561751 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
CDH1-203ENST00000561751 KIF3CO14782 793 aa9.96□□□□□ -0.82
CDH1-203ENST00000561751 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
CDH1-203ENST00000561751 BCANQ96GW7 911 aa9.96□□□□□ -0.82
CDH1-203ENST00000561751 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.82
CDH1-203ENST00000561751 PPP1R37O75864 691 aa9.95□□□□□ -0.82
CDH1-203ENST00000561751 CCDC136Q96JN2 1154 aa9.95□□□□□ -0.82
CDH1-203ENST00000561751 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
CDH1-203ENST00000561751 ERBB3P21860 1342 aa9.95□□□□□ -0.82
CDH1-203ENST00000561751 ABCC8Q09428 1581 aa9.95□□□□□ -0.82
CDH1-203ENST00000561751 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
CDH1-203ENST00000561751 AQRO60306 1485 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDH1-203ENST00000561751 C2orf72A6NCS6 295 aa9.93□□□□□ -0.82
CDH1-203ENST00000561751 GOLGA3Q08378 1498 aa9.92□□□□□ -0.82
CDH1-203ENST00000561751 ARSIQ5FYB1 569 aa9.92□□□□□ -0.82
CDH1-203ENST00000561751 VARS2Q5ST30 1063 aaKnown RBP9.92□□□□□ -0.82
CDH1-203ENST00000561751 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDH1-203ENST00000561751 IPO9Q96P70 1041 aaKnown RBP9.92□□□□□ -0.82
CDH1-203ENST00000561751 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
CDH1-203ENST00000561751 PPP1R15AO75807 674 aaPredicted RBP9.9□□□□□ -0.82
CDH1-203ENST00000561751 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
CDH1-203ENST00000561751 POLA1P09884 1462 aaPredicted RBP9.89□□□□□ -0.83
CDH1-203ENST00000561751 VPS8Q8N3P4 1428 aa9.89□□□□□ -0.83
CDH1-203ENST00000561751 ANP32AP39687 249 aaKnown RBP9.88□□□□□ -0.83
CDH1-203ENST00000561751 HS6ST3Q8IZP7 471 aa9.88□□□□□ -0.83
CDH1-203ENST00000561751 ANP32CO43423 234 aa9.87□□□□□ -0.83
CDH1-203ENST00000561751 ITGAEP38570 1179 aa9.85□□□□□ -0.83
CDH1-203ENST00000561751 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
CDH1-203ENST00000561751 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
CDH1-203ENST00000561751 SNAPC4Q5SXM2 1469 aa9.85□□□□□ -0.83
CDH1-203ENST00000561751 SYNJ1O43426 1573 aa9.84□□□□□ -0.83
CDH1-203ENST00000561751 IL27Q8NEV9 243 aa9.84□□□□□ -0.83
CDH1-203ENST00000561751 WDR97A6NE52 1622 aa9.84□□□□□ -0.83
CDH1-203ENST00000561751 KIF21BO75037 1637 aa9.83□□□□□ -0.84
CDH1-203ENST00000561751 RAD54L2Q9Y4B4 1467 aa9.83□□□□□ -0.84
CDH1-203ENST00000561751 TDRD9Q8NDG6 1382 aaKnown RBP9.82□□□□□ -0.84
CDH1-203ENST00000561751 MAGI1Q96QZ7 1491 aaPredicted RBP9.82□□□□□ -0.84
CDH1-203ENST00000561751 RRBP1Q9P2E9 1410 aaKnown RBP9.82□□□□□ -0.84
CDH1-203ENST00000561751 CHGAP10645 457 aaKnown RBP9.81□□□□□ -0.84
CDH1-203ENST00000561751 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
CDH1-203ENST00000561751 TMC2Q8TDI7 906 aa9.81□□□□□ -0.84
CDH1-203ENST00000561751 CLIP1P30622 1438 aa9.81□□□□□ -0.84
CDH1-203ENST00000561751 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
CDH1-203ENST00000561751 SLC34A2O95436 690 aa9.8□□□□□ -0.84
CDH1-203ENST00000561751 NUDT7P0C024 238 aa9.8□□□□□ -0.84
CDH1-203ENST00000561751 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
CDH1-203ENST00000561751 PCDHGA4Q9Y5G9 962 aa9.8□□□□□ -0.84
CDH1-203ENST00000561751 SOGA1O94964 1423 aa9.8□□□□□ -0.84
CDH1-203ENST00000561751 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
CDH1-203ENST00000561751 NBR1Q14596 966 aa9.79□□□□□ -0.84
CDH1-203ENST00000561751 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
CDH1-203ENST00000561751 GRIN2BQ13224 1484 aa9.78□□□□□ -0.84
CDH1-203ENST00000561751 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
CDH1-203ENST00000561751 CUX1P39880 1505 aa9.77□□□□□ -0.84
CDH1-203ENST00000561751 RRP9O43818 475 aaKnown RBP9.76□□□□□ -0.85
CDH1-203ENST00000561751 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
CDH1-203ENST00000561751 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
CDH1-203ENST00000561751 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
CDH1-203ENST00000561751 POTEEQ6S8J3 1075 aa9.74□□□□□ -0.85
CDH1-203ENST00000561751 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.74□□□□□ -0.85
CDH1-203ENST00000561751 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
CDH1-203ENST00000561751 MS4A1P11836 297 aa9.73□□□□□ -0.85
CDH1-203ENST00000561751 FOXK1P85037 733 aa9.73□□□□□ -0.85
CDH1-203ENST00000561751 DDX10Q13206 875 aaKnown RBP9.73□□□□□ -0.85
CDH1-203ENST00000561751 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
CDH1-203ENST00000561751 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
CDH1-203ENST00000561751 DDRGK1Q96HY6 314 aa9.72□□□□□ -0.85
CDH1-203ENST00000561751 ZMYND15Q9H091 742 aa9.72□□□□□ -0.85
CDH1-203ENST00000561751 PBRM1Q86U86 1689 aa9.71□□□□□ -0.85
CDH1-203ENST00000561751 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
CDH1-203ENST00000561751 DSG2Q14126 1118 aa9.71□□□□□ -0.86
CDH1-203ENST00000561751 PLPP6Q8IY26 295 aa9.71□□□□□ -0.86
CDH1-203ENST00000561751 TRIM52Q96A61 297 aa9.71□□□□□ -0.86
CDH1-203ENST00000561751 ERCC6L2Q5T890 1561 aa9.71□□□□□ -0.86
CDH1-203ENST00000561751 NEFMP07197 916 aa9.7□□□□□ -0.86
CDH1-203ENST00000561751 PTCD2Q8WV60 388 aaKnown RBP9.7□□□□□ -0.86
CDH1-203ENST00000561751 RNF166Q96A37 237 aaPredicted RBP9.7□□□□□ -0.86
CDH1-203ENST00000561751 ZBED9Q6R2W3 1325 aa9.7□□□□□ -0.86
CDH1-203ENST00000561751 MAPKBP1O60336 1514 aa9.69□□□□□ -0.86
CDH1-203ENST00000561751 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
CDH1-203ENST00000561751 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
CDH1-203ENST00000561751 ABCA5Q8WWZ7 1642 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms