RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
CDH1-203ENST00000561751 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
CDH1-203ENST00000561751 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
CDH1-203ENST00000561751 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
CDH1-203ENST00000561751 FOXD1Q16676 465 aa18.05■□□□□ 0.48
CDH1-203ENST00000561751 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
CDH1-203ENST00000561751 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
CDH1-203ENST00000561751 ADRA2BP18089 450 aa16.88■□□□□ 0.29
CDH1-203ENST00000561751 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
CDH1-203ENST00000561751 MSH5O43196 834 aa16.78■□□□□ 0.28
CDH1-203ENST00000561751 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
CDH1-203ENST00000561751 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
CDH1-203ENST00000561751 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
CDH1-203ENST00000561751 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
CDH1-203ENST00000561751 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
CDH1-203ENST00000561751 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CDH1-203ENST00000561751 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
CDH1-203ENST00000561751 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
CDH1-203ENST00000561751 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
CDH1-203ENST00000561751 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
CDH1-203ENST00000561751 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
CDH1-203ENST00000561751 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
CDH1-203ENST00000561751 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
CDH1-203ENST00000561751 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
CDH1-203ENST00000561751 KCNA4P22459 653 aa14.18□□□□□ -0.14
CDH1-203ENST00000561751 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
CDH1-203ENST00000561751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDH1-203ENST00000561751 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
CDH1-203ENST00000561751 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
CDH1-203ENST00000561751 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
CDH1-203ENST00000561751 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
CDH1-203ENST00000561751 CAPN15O75808 1086 aa13.53□□□□□ -0.24
CDH1-203ENST00000561751 DSG3P32926 999 aa13.5□□□□□ -0.25
CDH1-203ENST00000561751 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
CDH1-203ENST00000561751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
CDH1-203ENST00000561751 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
CDH1-203ENST00000561751 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
CDH1-203ENST00000561751 APLP2Q06481 763 aa13.3□□□□□ -0.28
CDH1-203ENST00000561751 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
CDH1-203ENST00000561751 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
CDH1-203ENST00000561751 ABCB7O75027 752 aa13.27□□□□□ -0.29
CDH1-203ENST00000561751 MYCNP04198 464 aaPredicted RBP13.26□□□□□ -0.29
CDH1-203ENST00000561751 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
CDH1-203ENST00000561751 ZBTB22O15209 634 aa13.08□□□□□ -0.32
CDH1-203ENST00000561751 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
CDH1-203ENST00000561751 POLA2Q14181 598 aa13.02□□□□□ -0.33
CDH1-203ENST00000561751 POTEHQ6S545 545 aa12.81□□□□□ -0.36
CDH1-203ENST00000561751 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
CDH1-203ENST00000561751 RBM42Q9BTD8 480 aaKnown RBP12.78□□□□□ -0.36
CDH1-203ENST00000561751 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CDH1-203ENST00000561751 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
CDH1-203ENST00000561751 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
CDH1-203ENST00000561751 MYT1Q01538 1121 aa12.57□□□□□ -0.4
CDH1-203ENST00000561751 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
CDH1-203ENST00000561751 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
CDH1-203ENST00000561751 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
CDH1-203ENST00000561751 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
CDH1-203ENST00000561751 ABCC9O60706 1549 aa12.45□□□□□ -0.42
CDH1-203ENST00000561751 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
CDH1-203ENST00000561751 FBLN2P98095 1184 aa12.4□□□□□ -0.42
CDH1-203ENST00000561751 PITPNM1O00562 1244 aa12.33□□□□□ -0.44
CDH1-203ENST00000561751 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
CDH1-203ENST00000561751 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
CDH1-203ENST00000561751 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
CDH1-203ENST00000561751 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
CDH1-203ENST00000561751 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
CDH1-203ENST00000561751 HRCP23327 699 aa12.24□□□□□ -0.45
CDH1-203ENST00000561751 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDH1-203ENST00000561751 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
CDH1-203ENST00000561751 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
CDH1-203ENST00000561751 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
CDH1-203ENST00000561751 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
CDH1-203ENST00000561751 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
CDH1-203ENST00000561751 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDH1-203ENST00000561751 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
CDH1-203ENST00000561751 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
CDH1-203ENST00000561751 HAX1O00165 279 aa12□□□□□ -0.49
CDH1-203ENST00000561751 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
CDH1-203ENST00000561751 EVX2Q03828 476 aa11.96□□□□□ -0.49
CDH1-203ENST00000561751 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
CDH1-203ENST00000561751 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CDH1-203ENST00000561751 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
CDH1-203ENST00000561751 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
CDH1-203ENST00000561751 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
CDH1-203ENST00000561751 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
CDH1-203ENST00000561751 ZEB1P37275 1124 aaPredicted RBP11.67□□□□□ -0.54
CDH1-203ENST00000561751 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
CDH1-203ENST00000561751 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
CDH1-203ENST00000561751 GABBR2O75899 941 aa11.63□□□□□ -0.55
CDH1-203ENST00000561751 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
CDH1-203ENST00000561751 NACADO15069 1562 aa11.58□□□□□ -0.55
CDH1-203ENST00000561751 PROM2Q8N271 834 aa11.58□□□□□ -0.56
CDH1-203ENST00000561751 DCAF1Q9Y4B6 1507 aa11.58□□□□□ -0.56
CDH1-203ENST00000561751 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
CDH1-203ENST00000561751 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
CDH1-203ENST00000561751 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
CDH1-203ENST00000561751 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
CDH1-203ENST00000561751 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
CDH1-203ENST00000561751 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
CDH1-203ENST00000561751 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms