RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
ZEB1-220ENST00000560909 ZNF608Q9ULD9 1512 aaPredicted RBP9.11□□□□□ -0.95
ZEB1-220ENST00000560909 RUSC2Q8N2Y8 1516 aa9.1□□□□□ -0.95
ZEB1-220ENST00000560909 AQRO60306 1485 aaKnown RBP eCLIP9.09□□□□□ -0.95
ZEB1-220ENST00000560909 GAPVD1Q14C86 1478 aa9.09□□□□□ -0.95
ZEB1-220ENST00000560909 KCNH8Q96L42 1107 aa9.09□□□□□ -0.95
ZEB1-220ENST00000560909 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.95
ZEB1-220ENST00000560909 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
ZEB1-220ENST00000560909 ERICH3Q5RHP9 1530 aa9.07□□□□□ -0.96
ZEB1-220ENST00000560909 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
ZEB1-220ENST00000560909 GRIN2BQ13224 1484 aa9.07□□□□□ -0.96
ZEB1-220ENST00000560909 KIF3CO14782 793 aa9.06□□□□□ -0.96
ZEB1-220ENST00000560909 PRXQ9BXM0 1461 aa9.06□□□□□ -0.96
ZEB1-220ENST00000560909 BHMG1C9JSJ3 638 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-220ENST00000560909 SOX12O15370 315 aa9.04□□□□□ -0.96
ZEB1-220ENST00000560909 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
ZEB1-220ENST00000560909 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
ZEB1-220ENST00000560909 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
ZEB1-220ENST00000560909 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
ZEB1-220ENST00000560909 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
ZEB1-220ENST00000560909 MAGI1Q96QZ7 1491 aaPredicted RBP9.02□□□□□ -0.96
ZEB1-220ENST00000560909 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-220ENST00000560909 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
ZEB1-220ENST00000560909 PHF8Q9UPP1 1060 aa9.02□□□□□ -0.97
ZEB1-220ENST00000560909 FHAD1B1AJZ9 1412 aa9.02□□□□□ -0.97
ZEB1-220ENST00000560909 KCNC4Q03721 635 aa9.01□□□□□ -0.97
ZEB1-220ENST00000560909 KLHL34Q8N239 644 aa9.01□□□□□ -0.97
ZEB1-220ENST00000560909 FAM9AQ8IZU1 332 aaPredicted RBP8.99□□□□□ -0.97
ZEB1-220ENST00000560909 SNAPC4Q5SXM2 1469 aa8.99□□□□□ -0.97
ZEB1-220ENST00000560909 SYNJ2O15056 1496 aa8.98□□□□□ -0.97
ZEB1-220ENST00000560909 RAPGEF2Q9Y4G8 1499 aa8.98□□□□□ -0.97
ZEB1-220ENST00000560909 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
ZEB1-220ENST00000560909 PRKD2Q9BZL6 878 aa8.98□□□□□ -0.97
ZEB1-220ENST00000560909 CUL7Q14999 1698 aa8.97□□□□□ -0.97
ZEB1-220ENST00000560909 ADAMTS12P58397 1594 aa8.97□□□□□ -0.97
ZEB1-220ENST00000560909 KIF21BO75037 1637 aa8.97□□□□□ -0.97
ZEB1-220ENST00000560909 PBRM1Q86U86 1689 aa8.95□□□□□ -0.98
ZEB1-220ENST00000560909 GRIN2AQ12879 1464 aa8.95□□□□□ -0.98
ZEB1-220ENST00000560909 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-220ENST00000560909 NUP160Q12769 1436 aa8.94□□□□□ -0.98
ZEB1-220ENST00000560909 GOLGA3Q08378 1498 aa8.94□□□□□ -0.98
ZEB1-220ENST00000560909 POTECB2RU33 542 aa8.93□□□□□ -0.98
ZEB1-220ENST00000560909 PDZRN3Q9UPQ7 1066 aa8.93□□□□□ -0.98
ZEB1-220ENST00000560909 TNIKQ9UKE5 1360 aa8.92□□□□□ -0.98
ZEB1-220ENST00000560909 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
ZEB1-220ENST00000560909 SUZ12Q15022 739 aaKnown RBP8.9□□□□□ -0.98
ZEB1-220ENST00000560909 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.99
ZEB1-220ENST00000560909 NBPF3Q9H094 633 aa8.89□□□□□ -0.99
ZEB1-220ENST00000560909 ANKK1Q8NFD2 765 aa8.87□□□□□ -0.99
ZEB1-220ENST00000560909 CIZ1Q9ULV3 898 aaPredicted RBP8.87□□□□□ -0.99
ZEB1-220ENST00000560909 CEP170Q5SW79 1584 aa8.86□□□□□ -0.99
ZEB1-220ENST00000560909 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
ZEB1-220ENST00000560909 PTCD2Q8WV60 388 aaKnown RBP8.86□□□□□ -0.99
ZEB1-220ENST00000560909 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
ZEB1-220ENST00000560909 V9GY48 417 aaPredicted RBP8.86□□□□□ -0.99
ZEB1-220ENST00000560909 BCAMP50895 628 aa8.85□□□□□ -0.99
ZEB1-220ENST00000560909 NYAP1Q6ZVC0 841 aa8.85□□□□□ -0.99
ZEB1-220ENST00000560909 TMC2Q8TDI7 906 aa8.85□□□□□ -0.99
ZEB1-220ENST00000560909 CLASP1Q7Z460 1538 aa8.85□□□□□ -0.99
ZEB1-220ENST00000560909 JPH4Q96JJ6 628 aa8.84□□□□□ -0.99
ZEB1-220ENST00000560909 UGGT2Q9NYU1 1516 aa8.83□□□□□ -1
ZEB1-220ENST00000560909 CHD1O14646 1710 aa8.83□□□□□ -1
ZEB1-220ENST00000560909 BCL2L12Q9HB09 334 aa8.82□□□□□ -1
ZEB1-220ENST00000560909 NLRP6P59044 892 aa8.81□□□□□ -1
ZEB1-220ENST00000560909 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
ZEB1-220ENST00000560909 IQGAP2Q13576 1575 aa8.81□□□□□ -1
ZEB1-220ENST00000560909 CEP162Q5TB80 1403 aa8.8□□□□□ -1
ZEB1-220ENST00000560909 SHROOM2Q13796 1616 aa8.8□□□□□ -1
ZEB1-220ENST00000560909 DISP1Q96F81 1524 aa8.8□□□□□ -1
ZEB1-220ENST00000560909 WFS1O76024 890 aa8.79□□□□□ -1
ZEB1-220ENST00000560909 FKBP8Q14318 412 aa8.79□□□□□ -1
ZEB1-220ENST00000560909 WBP1LQ9NX94 342 aa8.79□□□□□ -1
ZEB1-220ENST00000560909 CLIP1P30622 1438 aa8.79□□□□□ -1
ZEB1-220ENST00000560909 ARHGAP35Q9NRY4 1499 aa8.78□□□□□ -1
ZEB1-220ENST00000560909 MYT1Q01538 1121 aa8.78□□□□□ -1
ZEB1-220ENST00000560909 EFCAB5A4FU69 1503 aa8.78□□□□□ -1
ZEB1-220ENST00000560909 CTTNBP2Q8WZ74 1663 aa8.78□□□□□ -1
ZEB1-220ENST00000560909 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
ZEB1-220ENST00000560909 PTPREP23469 700 aa8.77□□□□□ -1.01
ZEB1-220ENST00000560909 FBXO22Q8NEZ5 403 aa8.77□□□□□ -1.01
ZEB1-220ENST00000560909 PRG4Q92954 1404 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-220ENST00000560909 SAMD9Q5K651 1589 aa8.77□□□□□ -1.01
ZEB1-220ENST00000560909 CARMIL2Q6F5E8 1435 aa8.75□□□□□ -1.01
ZEB1-220ENST00000560909 ZNF454Q8N9F8 522 aa8.75□□□□□ -1.01
ZEB1-220ENST00000560909 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
ZEB1-220ENST00000560909 WIPF1O43516 503 aa8.74□□□□□ -1.01
ZEB1-220ENST00000560909 PKDCCQ504Y2 493 aa8.73□□□□□ -1.01
ZEB1-220ENST00000560909 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
ZEB1-220ENST00000560909 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
ZEB1-220ENST00000560909 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.02
ZEB1-220ENST00000560909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-220ENST00000560909 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
ZEB1-220ENST00000560909 ZFP91Q96JP5 570 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-220ENST00000560909 PTPRGP23470 1445 aa8.71□□□□□ -1.02
ZEB1-220ENST00000560909 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.02
ZEB1-220ENST00000560909 FMN1Q68DA7 1419 aa8.71□□□□□ -1.02
ZEB1-220ENST00000560909 TBC1D12O60347 775 aa8.7□□□□□ -1.02
ZEB1-220ENST00000560909 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
ZEB1-220ENST00000560909 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
ZEB1-220ENST00000560909 P3H3Q8IVL6 736 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms