RNA–Protein interactions for RNA: ENST00000552006.1

PPFIA2-225, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-225ENST00000552006 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-225ENST00000552006 POLA1P09884 1462 aaPredicted RBP8.41□□□□□ -1.06
PPFIA2-225ENST00000552006 PPP4R3BQ5MIZ7 849 aa8.41□□□□□ -1.06
PPFIA2-225ENST00000552006 FGD5Q6ZNL6 1462 aa8.4□□□□□ -1.06
PPFIA2-225ENST00000552006 IFT140Q96RY7 1462 aa8.4□□□□□ -1.06
PPFIA2-225ENST00000552006 SOGA1O94964 1423 aa8.4□□□□□ -1.06
PPFIA2-225ENST00000552006 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
PPFIA2-225ENST00000552006 KCTD12Q96CX2 325 aaKnown RBP8.4□□□□□ -1.06
PPFIA2-225ENST00000552006 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
PPFIA2-225ENST00000552006 TBC1D12O60347 775 aa8.39□□□□□ -1.07
PPFIA2-225ENST00000552006 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
PPFIA2-225ENST00000552006 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
PPFIA2-225ENST00000552006 SYNJ1O43426 1573 aa8.37□□□□□ -1.07
PPFIA2-225ENST00000552006 STAC3Q96MF2 364 aa8.36□□□□□ -1.07
PPFIA2-225ENST00000552006 VPS9D1Q9Y2B5 631 aa8.36□□□□□ -1.07
PPFIA2-225ENST00000552006 CHD1O14646 1710 aa8.36□□□□□ -1.07
PPFIA2-225ENST00000552006 OXER1Q8TDS5 423 aa8.35□□□□□ -1.07
PPFIA2-225ENST00000552006 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
PPFIA2-225ENST00000552006 WRNQ14191 1432 aaPredicted RBP eCLIP8.33□□□□□ -1.08
PPFIA2-225ENST00000552006 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 PTPN5P54829 565 aa8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 NKX1-1Q15270 411 aaPredicted RBP8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 TOP2BQ02880 1626 aa8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
PPFIA2-225ENST00000552006 PBRM1Q86U86 1689 aa8.31□□□□□ -1.08
PPFIA2-225ENST00000552006 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
PPFIA2-225ENST00000552006 CRISPLD2Q9H0B8 497 aa8.3□□□□□ -1.08
PPFIA2-225ENST00000552006 BCL2L12Q9HB09 334 aa8.3□□□□□ -1.08
PPFIA2-225ENST00000552006 SNAPC4Q5SXM2 1469 aa8.3□□□□□ -1.08
PPFIA2-225ENST00000552006 BHMG1C9JSJ3 638 aaPredicted RBP8.29□□□□□ -1.08
PPFIA2-225ENST00000552006 GAPVD1Q14C86 1478 aa8.28□□□□□ -1.08
PPFIA2-225ENST00000552006 CHMP7Q8WUX9 453 aaPredicted RBP8.28□□□□□ -1.08
PPFIA2-225ENST00000552006 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
PPFIA2-225ENST00000552006 FOSBP53539 338 aa8.27□□□□□ -1.09
PPFIA2-225ENST00000552006 PPP1R15BQ5SWA1 713 aa8.27□□□□□ -1.09
PPFIA2-225ENST00000552006 ABCA5Q8WWZ7 1642 aa8.26□□□□□ -1.09
PPFIA2-225ENST00000552006 ABCA10Q8WWZ4 1543 aa8.26□□□□□ -1.09
PPFIA2-225ENST00000552006 ANO8Q9HCE9 1232 aaPredicted RBP8.26□□□□□ -1.09
PPFIA2-225ENST00000552006 NCKAP5LQ9HCH0 1330 aa8.26□□□□□ -1.09
PPFIA2-225ENST00000552006 GRIN2BQ13224 1484 aa8.26□□□□□ -1.09
PPFIA2-225ENST00000552006 RIMBP3CA6NJZ7 1639 aa8.25□□□□□ -1.09
PPFIA2-225ENST00000552006 RIMBP3BA6NNM3 1639 aa8.25□□□□□ -1.09
PPFIA2-225ENST00000552006 RIMBP3Q9UFD9 1639 aa8.25□□□□□ -1.09
PPFIA2-225ENST00000552006 PTPREP23469 700 aa8.25□□□□□ -1.09
PPFIA2-225ENST00000552006 THSD4Q6ZMP0 1018 aa8.25□□□□□ -1.09
PPFIA2-225ENST00000552006 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
PPFIA2-225ENST00000552006 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
PPFIA2-225ENST00000552006 WNT2BQ93097 391 aa8.23□□□□□ -1.09
PPFIA2-225ENST00000552006 EVI5O60447 810 aa8.22□□□□□ -1.09
PPFIA2-225ENST00000552006 PDE4AP27815 886 aa8.22□□□□□ -1.09
PPFIA2-225ENST00000552006 CYB5RLQ6IPT4 315 aa8.22□□□□□ -1.09
PPFIA2-225ENST00000552006 ADAM33Q9BZ11 813 aa8.22□□□□□ -1.09
PPFIA2-225ENST00000552006 MAGI1Q96QZ7 1491 aaPredicted RBP8.21□□□□□ -1.09
PPFIA2-225ENST00000552006 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
PPFIA2-225ENST00000552006 MRPL50Q8N5N7 158 aaKnown RBP8.21□□□□□ -1.1
PPFIA2-225ENST00000552006 ZDHHC16Q969W1 377 aa8.21□□□□□ -1.1
PPFIA2-225ENST00000552006 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
PPFIA2-225ENST00000552006 RYDENQ9NUL5 291 aaKnown RBP8.21□□□□□ -1.1
PPFIA2-225ENST00000552006 SYNJ2O15056 1496 aa8.2□□□□□ -1.1
PPFIA2-225ENST00000552006 ARHGEF11O15085 1522 aa8.2□□□□□ -1.1
PPFIA2-225ENST00000552006 RUSC2Q8N2Y8 1516 aa8.2□□□□□ -1.1
PPFIA2-225ENST00000552006 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
PPFIA2-225ENST00000552006 RGS20O76081 388 aa8.18□□□□□ -1.1
PPFIA2-225ENST00000552006 LARP6Q9BRS8 491 aaKnown RBP8.18□□□□□ -1.1
PPFIA2-225ENST00000552006 A0A0G2JS52 829 aa8.17□□□□□ -1.1
PPFIA2-225ENST00000552006 GRIN2AQ12879 1464 aa8.17□□□□□ -1.1
PPFIA2-225ENST00000552006 CLASP1Q7Z460 1538 aa8.17□□□□□ -1.1
PPFIA2-225ENST00000552006 CEP170Q5SW79 1584 aa8.17□□□□□ -1.1
PPFIA2-225ENST00000552006 ERCC6L2Q5T890 1561 aa8.17□□□□□ -1.1
PPFIA2-225ENST00000552006 GTPBP6O43824 516 aaPredicted RBP8.16□□□□□ -1.1
PPFIA2-225ENST00000552006 IGF1RP08069 1367 aa8.16□□□□□ -1.1
PPFIA2-225ENST00000552006 MAP3K9P80192 1104 aa8.16□□□□□ -1.1
PPFIA2-225ENST00000552006 ERICH3Q5RHP9 1530 aa8.15□□□□□ -1.1
PPFIA2-225ENST00000552006 FHAD1B1AJZ9 1412 aa8.15□□□□□ -1.1
PPFIA2-225ENST00000552006 DDX27Q96GQ7 796 aaKnown RBP8.15□□□□□ -1.1
PPFIA2-225ENST00000552006 IRX2Q9BZI1 471 aaPredicted RBP8.15□□□□□ -1.1
PPFIA2-225ENST00000552006 NBPF3Q9H094 633 aa8.15□□□□□ -1.1
PPFIA2-225ENST00000552006 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
PPFIA2-225ENST00000552006 KIF27Q86VH2 1401 aa8.14□□□□□ -1.11
PPFIA2-225ENST00000552006 PROX2Q3B8N5 592 aa8.14□□□□□ -1.11
PPFIA2-225ENST00000552006 EMILIN3Q9NT22 766 aa8.14□□□□□ -1.11
PPFIA2-225ENST00000552006 PCDHGA10Q9Y5H3 936 aa8.14□□□□□ -1.11
PPFIA2-225ENST00000552006 TTBK1Q5TCY1 1321 aaPredicted RBP8.13□□□□□ -1.11
PPFIA2-225ENST00000552006 COL9A1P20849 921 aa8.13□□□□□ -1.11
PPFIA2-225ENST00000552006 MFSD10Q14728 455 aa8.13□□□□□ -1.11
PPFIA2-225ENST00000552006 FAM9AQ8IZU1 332 aaPredicted RBP8.13□□□□□ -1.11
PPFIA2-225ENST00000552006 PPP1R3GB7ZBB8 358 aa8.12□□□□□ -1.11
PPFIA2-225ENST00000552006 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
PPFIA2-225ENST00000552006 CARMIL1Q5VZK9 1371 aa8.1□□□□□ -1.11
PPFIA2-225ENST00000552006 NUP160Q12769 1436 aa8.1□□□□□ -1.11
PPFIA2-225ENST00000552006 CUL7Q14999 1698 aa8.09□□□□□ -1.11
PPFIA2-225ENST00000552006 BCAMP50895 628 aa8.09□□□□□ -1.11
PPFIA2-225ENST00000552006 ANKK1Q8NFD2 765 aa8.09□□□□□ -1.11
PPFIA2-225ENST00000552006 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
PPFIA2-225ENST00000552006 PRG4Q92954 1404 aaPredicted RBP8.08□□□□□ -1.12
PPFIA2-225ENST00000552006 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
PPFIA2-225ENST00000552006 CADPS2Q86UW7 1296 aa8.07□□□□□ -1.12
PPFIA2-225ENST00000552006 KIAA1468Q9P260 1216 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms