RNA–Protein interactions for RNA: ENST00000552006.1

PPFIA2-225, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-225ENST00000552006 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
PPFIA2-225ENST00000552006 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
PPFIA2-225ENST00000552006 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
PPFIA2-225ENST00000552006 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
PPFIA2-225ENST00000552006 FOXD1Q16676 465 aa16.34■□□□□ 0.21
PPFIA2-225ENST00000552006 MSH5O43196 834 aa15.3■□□□□ 0.04
PPFIA2-225ENST00000552006 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
PPFIA2-225ENST00000552006 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
PPFIA2-225ENST00000552006 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
PPFIA2-225ENST00000552006 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
PPFIA2-225ENST00000552006 ADRA2BP18089 450 aa15.09■□□□□ 0.01
PPFIA2-225ENST00000552006 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
PPFIA2-225ENST00000552006 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
PPFIA2-225ENST00000552006 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
PPFIA2-225ENST00000552006 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
PPFIA2-225ENST00000552006 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
PPFIA2-225ENST00000552006 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
PPFIA2-225ENST00000552006 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
PPFIA2-225ENST00000552006 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
PPFIA2-225ENST00000552006 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
PPFIA2-225ENST00000552006 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
PPFIA2-225ENST00000552006 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
PPFIA2-225ENST00000552006 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
PPFIA2-225ENST00000552006 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
PPFIA2-225ENST00000552006 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
PPFIA2-225ENST00000552006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
PPFIA2-225ENST00000552006 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
PPFIA2-225ENST00000552006 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
PPFIA2-225ENST00000552006 KCNA4P22459 653 aa12.24□□□□□ -0.45
PPFIA2-225ENST00000552006 CAPN15O75808 1086 aa12.2□□□□□ -0.46
PPFIA2-225ENST00000552006 DSG3P32926 999 aa12.19□□□□□ -0.46
PPFIA2-225ENST00000552006 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
PPFIA2-225ENST00000552006 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
PPFIA2-225ENST00000552006 POTEHQ6S545 545 aa11.94□□□□□ -0.5
PPFIA2-225ENST00000552006 ABCB7O75027 752 aa11.92□□□□□ -0.5
PPFIA2-225ENST00000552006 APLP2Q06481 763 aa11.89□□□□□ -0.51
PPFIA2-225ENST00000552006 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
PPFIA2-225ENST00000552006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
PPFIA2-225ENST00000552006 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
PPFIA2-225ENST00000552006 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
PPFIA2-225ENST00000552006 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
PPFIA2-225ENST00000552006 POLA2Q14181 598 aa11.62□□□□□ -0.55
PPFIA2-225ENST00000552006 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
PPFIA2-225ENST00000552006 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
PPFIA2-225ENST00000552006 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
PPFIA2-225ENST00000552006 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
PPFIA2-225ENST00000552006 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
PPFIA2-225ENST00000552006 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
PPFIA2-225ENST00000552006 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
PPFIA2-225ENST00000552006 ZBTB22O15209 634 aa11.28□□□□□ -0.6
PPFIA2-225ENST00000552006 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-225ENST00000552006 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
PPFIA2-225ENST00000552006 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-225ENST00000552006 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
PPFIA2-225ENST00000552006 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
PPFIA2-225ENST00000552006 SP7Q8TDD2 431 aaPredicted RBP11.1□□□□□ -0.63
PPFIA2-225ENST00000552006 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
PPFIA2-225ENST00000552006 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
PPFIA2-225ENST00000552006 HAX1O00165 279 aa10.98□□□□□ -0.65
PPFIA2-225ENST00000552006 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
PPFIA2-225ENST00000552006 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
PPFIA2-225ENST00000552006 FBLN2P98095 1184 aa10.95□□□□□ -0.66
PPFIA2-225ENST00000552006 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
PPFIA2-225ENST00000552006 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
PPFIA2-225ENST00000552006 EVX2Q03828 476 aa10.89□□□□□ -0.67
PPFIA2-225ENST00000552006 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
PPFIA2-225ENST00000552006 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
PPFIA2-225ENST00000552006 PRKAR2AP13861 404 aaKnown RBP10.81□□□□□ -0.68
PPFIA2-225ENST00000552006 SSUH2Q9Y2M2 353 aa10.81□□□□□ -0.68
PPFIA2-225ENST00000552006 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
PPFIA2-225ENST00000552006 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
PPFIA2-225ENST00000552006 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
PPFIA2-225ENST00000552006 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
PPFIA2-225ENST00000552006 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
PPFIA2-225ENST00000552006 GABBR2O75899 941 aa10.59□□□□□ -0.71
PPFIA2-225ENST00000552006 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
PPFIA2-225ENST00000552006 FARP1Q9Y4F1 1045 aaPredicted RBP10.47□□□□□ -0.73
PPFIA2-225ENST00000552006 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
PPFIA2-225ENST00000552006 LHX8Q68G74 356 aa10.42□□□□□ -0.74
PPFIA2-225ENST00000552006 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
PPFIA2-225ENST00000552006 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
PPFIA2-225ENST00000552006 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
PPFIA2-225ENST00000552006 CCDC180Q9P1Z9 1646 aa10.29□□□□□ -0.76
PPFIA2-225ENST00000552006 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
PPFIA2-225ENST00000552006 CLCN6P51797 869 aa10.28□□□□□ -0.76
PPFIA2-225ENST00000552006 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
PPFIA2-225ENST00000552006 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
PPFIA2-225ENST00000552006 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
PPFIA2-225ENST00000552006 ABCC9O60706 1549 aa10.26□□□□□ -0.77
PPFIA2-225ENST00000552006 DCBLD2Q96PD2 775 aa10.23□□□□□ -0.77
PPFIA2-225ENST00000552006 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
PPFIA2-225ENST00000552006 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-225ENST00000552006 PHF12Q96QT6 1004 aa10.13□□□□□ -0.79
PPFIA2-225ENST00000552006 PAK3O75914 559 aaPredicted RBP10.1□□□□□ -0.79
PPFIA2-225ENST00000552006 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
PPFIA2-225ENST00000552006 POTEB2H3BUK9 544 aa10.06□□□□□ -0.8
PPFIA2-225ENST00000552006 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
PPFIA2-225ENST00000552006 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
PPFIA2-225ENST00000552006 PROM2Q8N271 834 aa10□□□□□ -0.81
PPFIA2-225ENST00000552006 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms