RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
SDCBP-210ENST00000522843 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
SDCBP-210ENST00000522843 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
SDCBP-210ENST00000522843 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
SDCBP-210ENST00000522843 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
SDCBP-210ENST00000522843 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
SDCBP-210ENST00000522843 CHD1O14646 1710 aa12.95□□□□□ -0.34
SDCBP-210ENST00000522843 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
SDCBP-210ENST00000522843 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
SDCBP-210ENST00000522843 TOP2AP11388 1531 aaKnown RBP12.93□□□□□ -0.34
SDCBP-210ENST00000522843 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
SDCBP-210ENST00000522843 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
SDCBP-210ENST00000522843 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
SDCBP-210ENST00000522843 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
SDCBP-210ENST00000522843 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
SDCBP-210ENST00000522843 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
SDCBP-210ENST00000522843 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.34
SDCBP-210ENST00000522843 ZNF454Q8N9F8 522 aa12.89□□□□□ -0.35
SDCBP-210ENST00000522843 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
SDCBP-210ENST00000522843 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
SDCBP-210ENST00000522843 BCL2L12Q9HB09 334 aa12.86□□□□□ -0.35
SDCBP-210ENST00000522843 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
SDCBP-210ENST00000522843 PDE4AP27815 886 aa12.84□□□□□ -0.35
SDCBP-210ENST00000522843 FOSBP53539 338 aa12.82□□□□□ -0.36
SDCBP-210ENST00000522843 NCKAP5LQ9HCH0 1330 aa12.82□□□□□ -0.36
SDCBP-210ENST00000522843 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
SDCBP-210ENST00000522843 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
SDCBP-210ENST00000522843 PTPREP23469 700 aa12.81□□□□□ -0.36
SDCBP-210ENST00000522843 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
SDCBP-210ENST00000522843 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
SDCBP-210ENST00000522843 PTPN5P54829 565 aa12.8□□□□□ -0.36
SDCBP-210ENST00000522843 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
SDCBP-210ENST00000522843 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
SDCBP-210ENST00000522843 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
SDCBP-210ENST00000522843 EVI5O60447 810 aa12.76□□□□□ -0.37
SDCBP-210ENST00000522843 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
SDCBP-210ENST00000522843 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
SDCBP-210ENST00000522843 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
SDCBP-210ENST00000522843 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
SDCBP-210ENST00000522843 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
SDCBP-210ENST00000522843 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
SDCBP-210ENST00000522843 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
SDCBP-210ENST00000522843 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
SDCBP-210ENST00000522843 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
SDCBP-210ENST00000522843 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
SDCBP-210ENST00000522843 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
SDCBP-210ENST00000522843 DDX27Q96GQ7 796 aaKnown RBP12.72□□□□□ -0.37
SDCBP-210ENST00000522843 WNT2BQ93097 391 aa12.71□□□□□ -0.37
SDCBP-210ENST00000522843 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
SDCBP-210ENST00000522843 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
SDCBP-210ENST00000522843 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
SDCBP-210ENST00000522843 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
SDCBP-210ENST00000522843 GAPVD1Q14C86 1478 aa12.69□□□□□ -0.38
SDCBP-210ENST00000522843 MFSD10Q14728 455 aa12.67□□□□□ -0.38
SDCBP-210ENST00000522843 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
SDCBP-210ENST00000522843 SOGA1O94964 1423 aa12.67□□□□□ -0.38
SDCBP-210ENST00000522843 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
SDCBP-210ENST00000522843 RGS20O76081 388 aa12.65□□□□□ -0.38
SDCBP-210ENST00000522843 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
SDCBP-210ENST00000522843 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
SDCBP-210ENST00000522843 SYNJ2O15056 1496 aa12.63□□□□□ -0.39
SDCBP-210ENST00000522843 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
SDCBP-210ENST00000522843 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
SDCBP-210ENST00000522843 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
SDCBP-210ENST00000522843 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
SDCBP-210ENST00000522843 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
SDCBP-210ENST00000522843 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
SDCBP-210ENST00000522843 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
SDCBP-210ENST00000522843 A0A0G2JS52 829 aa12.58□□□□□ -0.4
SDCBP-210ENST00000522843 FBXW7Q969H0 707 aa12.57□□□□□ -0.4
SDCBP-210ENST00000522843 KIF13AQ9H1H9 1805 aa12.56□□□□□ -0.4
SDCBP-210ENST00000522843 PROX2Q3B8N5 592 aa12.56□□□□□ -0.4
SDCBP-210ENST00000522843 CUX1P39880 1505 aa12.56□□□□□ -0.4
SDCBP-210ENST00000522843 PHF14O94880 888 aa12.55□□□□□ -0.4
SDCBP-210ENST00000522843 COL9A1P20849 921 aa12.55□□□□□ -0.4
SDCBP-210ENST00000522843 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
SDCBP-210ENST00000522843 ANKK1Q8NFD2 765 aa12.54□□□□□ -0.4
SDCBP-210ENST00000522843 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
SDCBP-210ENST00000522843 CADPS2Q86UW7 1296 aa12.52□□□□□ -0.41
SDCBP-210ENST00000522843 LAPTM4BQ86VI4 370 aa12.52□□□□□ -0.41
SDCBP-210ENST00000522843 IRX2Q9BZI1 471 aaPredicted RBP12.52□□□□□ -0.41
SDCBP-210ENST00000522843 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
SDCBP-210ENST00000522843 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
SDCBP-210ENST00000522843 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
SDCBP-210ENST00000522843 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
SDCBP-210ENST00000522843 SOWAHBA6NEL2 793 aa12.47□□□□□ -0.41
SDCBP-210ENST00000522843 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
SDCBP-210ENST00000522843 BCAMP50895 628 aa12.47□□□□□ -0.41
SDCBP-210ENST00000522843 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
SDCBP-210ENST00000522843 EPAS1Q99814 870 aa12.47□□□□□ -0.41
SDCBP-210ENST00000522843 GRIN2AQ12879 1464 aa12.46□□□□□ -0.41
SDCBP-210ENST00000522843 NUP160Q12769 1436 aa12.46□□□□□ -0.41
SDCBP-210ENST00000522843 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
SDCBP-210ENST00000522843 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
SDCBP-210ENST00000522843 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
SDCBP-210ENST00000522843 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
SDCBP-210ENST00000522843 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
SDCBP-210ENST00000522843 DPYSL4O14531 572 aa12.42□□□□□ -0.42
SDCBP-210ENST00000522843 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
SDCBP-210ENST00000522843 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms