RNA–Protein interactions for RNA: ENST00000482007.5

RAD51C-209, Transcript of RAD51 paralog C, humanhuman

TSL 1 (best)

Gene RAD51C, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-209ENST00000482007 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
RAD51C-209ENST00000482007 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
RAD51C-209ENST00000482007 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
RAD51C-209ENST00000482007 ERBB3P21860 1342 aa12.1□□□□□ -0.47
RAD51C-209ENST00000482007 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
RAD51C-209ENST00000482007 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
RAD51C-209ENST00000482007 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
RAD51C-209ENST00000482007 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
RAD51C-209ENST00000482007 POTEB3A0JP26 581 aa12.07□□□□□ -0.48
RAD51C-209ENST00000482007 POTEMA6NI47 508 aa12.07□□□□□ -0.48
RAD51C-209ENST00000482007 POTEBQ6S5H4 581 aa12.07□□□□□ -0.48
RAD51C-209ENST00000482007 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
RAD51C-209ENST00000482007 PDIA6Q15084 440 aa12.06□□□□□ -0.48
RAD51C-209ENST00000482007 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
RAD51C-209ENST00000482007 TARBP1Q13395 1621 aaKnown RBP12.06□□□□□ -0.48
RAD51C-209ENST00000482007 ARAP1Q96P48 1450 aa12.06□□□□□ -0.48
RAD51C-209ENST00000482007 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
RAD51C-209ENST00000482007 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
RAD51C-209ENST00000482007 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
RAD51C-209ENST00000482007 DDX12PQ92771 950 aa12.02□□□□□ -0.49
RAD51C-209ENST00000482007 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
RAD51C-209ENST00000482007 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
RAD51C-209ENST00000482007 SEMA3EO15041 775 aa12□□□□□ -0.49
RAD51C-209ENST00000482007 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
RAD51C-209ENST00000482007 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
RAD51C-209ENST00000482007 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
RAD51C-209ENST00000482007 PTGER2P43116 358 aa11.98□□□□□ -0.49
RAD51C-209ENST00000482007 FOSBP53539 338 aa11.98□□□□□ -0.49
RAD51C-209ENST00000482007 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
RAD51C-209ENST00000482007 MLLT3P42568 568 aaPredicted RBP11.97□□□□□ -0.49
RAD51C-209ENST00000482007 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
RAD51C-209ENST00000482007 WDR97A6NE52 1622 aa11.96□□□□□ -0.5
RAD51C-209ENST00000482007 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
RAD51C-209ENST00000482007 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
RAD51C-209ENST00000482007 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
RAD51C-209ENST00000482007 PHF14O94880 888 aa11.94□□□□□ -0.5
RAD51C-209ENST00000482007 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
RAD51C-209ENST00000482007 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
RAD51C-209ENST00000482007 NBR1Q14596 966 aa11.92□□□□□ -0.5
RAD51C-209ENST00000482007 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
RAD51C-209ENST00000482007 ZDHHC16Q969W1 377 aa11.92□□□□□ -0.5
RAD51C-209ENST00000482007 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
RAD51C-209ENST00000482007 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
RAD51C-209ENST00000482007 ABCC8Q09428 1581 aa11.9□□□□□ -0.5
RAD51C-209ENST00000482007 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
RAD51C-209ENST00000482007 POTEEQ6S8J3 1075 aa11.9□□□□□ -0.5
RAD51C-209ENST00000482007 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
RAD51C-209ENST00000482007 OSBPP22059 807 aa11.89□□□□□ -0.51
RAD51C-209ENST00000482007 EPAS1Q99814 870 aa11.89□□□□□ -0.51
RAD51C-209ENST00000482007 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
RAD51C-209ENST00000482007 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
RAD51C-209ENST00000482007 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
RAD51C-209ENST00000482007 KIF13AQ9H1H9 1805 aa11.87□□□□□ -0.51
RAD51C-209ENST00000482007 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
RAD51C-209ENST00000482007 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
RAD51C-209ENST00000482007 PSEN2P49810 448 aa11.85□□□□□ -0.51
RAD51C-209ENST00000482007 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
RAD51C-209ENST00000482007 CCDC88BA6NC98 1476 aa11.84□□□□□ -0.51
RAD51C-209ENST00000482007 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
RAD51C-209ENST00000482007 ARHGAP33O14559 1287 aa11.83□□□□□ -0.52
RAD51C-209ENST00000482007 MAP3K7O43318 606 aa11.83□□□□□ -0.52
RAD51C-209ENST00000482007 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
RAD51C-209ENST00000482007 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
RAD51C-209ENST00000482007 KRTAP3-3Q9BYR6 98 aa11.83□□□□□ -0.52
RAD51C-209ENST00000482007 KRTAP3-2Q9BYR7 98 aa11.83□□□□□ -0.52
RAD51C-209ENST00000482007 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAD51C-209ENST00000482007 PTPREP23469 700 aa11.82□□□□□ -0.52
RAD51C-209ENST00000482007 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
RAD51C-209ENST00000482007 CYB5RLQ6IPT4 315 aa11.82□□□□□ -0.52
RAD51C-209ENST00000482007 PBX2P40425 430 aa11.8□□□□□ -0.52
RAD51C-209ENST00000482007 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
RAD51C-209ENST00000482007 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
RAD51C-209ENST00000482007 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
RAD51C-209ENST00000482007 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
RAD51C-209ENST00000482007 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
RAD51C-209ENST00000482007 COL9A1P20849 921 aa11.78□□□□□ -0.52
RAD51C-209ENST00000482007 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
RAD51C-209ENST00000482007 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
RAD51C-209ENST00000482007 CDHR5Q9HBB8 845 aa11.77□□□□□ -0.53
RAD51C-209ENST00000482007 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
RAD51C-209ENST00000482007 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
RAD51C-209ENST00000482007 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
RAD51C-209ENST00000482007 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
RAD51C-209ENST00000482007 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
RAD51C-209ENST00000482007 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
RAD51C-209ENST00000482007 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
RAD51C-209ENST00000482007 BCANQ96GW7 911 aa11.73□□□□□ -0.53
RAD51C-209ENST00000482007 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
RAD51C-209ENST00000482007 TULP1O00294 542 aaPredicted RBP11.72□□□□□ -0.53
RAD51C-209ENST00000482007 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
RAD51C-209ENST00000482007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAD51C-209ENST00000482007 ZBED2Q9BTP6 218 aa11.71□□□□□ -0.53
RAD51C-209ENST00000482007 NPDC1Q9NQX5 325 aaPredicted RBP11.71□□□□□ -0.53
RAD51C-209ENST00000482007 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.54
RAD51C-209ENST00000482007 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
RAD51C-209ENST00000482007 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
RAD51C-209ENST00000482007 CUX1P39880 1505 aa11.69□□□□□ -0.54
RAD51C-209ENST00000482007 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
RAD51C-209ENST00000482007 ADGRD1Q6QNK2 874 aa11.68□□□□□ -0.54
RAD51C-209ENST00000482007 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms