RNA–Protein interactions for RNA: ENST00000482007.5

RAD51C-209, Transcript of RAD51 paralog C, humanhuman

TSL 1 (best)

Gene RAD51C, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51C-209ENST00000482007 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
RAD51C-209ENST00000482007 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
RAD51C-209ENST00000482007 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
RAD51C-209ENST00000482007 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
RAD51C-209ENST00000482007 PLPPR3Q6T4P5 718 aa21.36■■□□□ 1.01
RAD51C-209ENST00000482007 FOXD1Q16676 465 aa21.35■■□□□ 1.01
RAD51C-209ENST00000482007 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
RAD51C-209ENST00000482007 ADRA2BP18089 450 aa20.53■□□□□ 0.88
RAD51C-209ENST00000482007 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
RAD51C-209ENST00000482007 MSH5O43196 834 aa19.63■□□□□ 0.73
RAD51C-209ENST00000482007 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
RAD51C-209ENST00000482007 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
RAD51C-209ENST00000482007 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
RAD51C-209ENST00000482007 KCNA4P22459 653 aa18.39■□□□□ 0.53
RAD51C-209ENST00000482007 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
RAD51C-209ENST00000482007 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
RAD51C-209ENST00000482007 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
RAD51C-209ENST00000482007 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
RAD51C-209ENST00000482007 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
RAD51C-209ENST00000482007 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
RAD51C-209ENST00000482007 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
RAD51C-209ENST00000482007 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
RAD51C-209ENST00000482007 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
RAD51C-209ENST00000482007 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
RAD51C-209ENST00000482007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAD51C-209ENST00000482007 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
RAD51C-209ENST00000482007 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
RAD51C-209ENST00000482007 ZBTB22O15209 634 aa16.93■□□□□ 0.3
RAD51C-209ENST00000482007 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
RAD51C-209ENST00000482007 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
RAD51C-209ENST00000482007 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
RAD51C-209ENST00000482007 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
RAD51C-209ENST00000482007 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
RAD51C-209ENST00000482007 C1QBPQ07021 282 aaKnown RBP16.62■□□□□ 0.25
RAD51C-209ENST00000482007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
RAD51C-209ENST00000482007 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
RAD51C-209ENST00000482007 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
RAD51C-209ENST00000482007 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
RAD51C-209ENST00000482007 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
RAD51C-209ENST00000482007 APLP2Q06481 763 aa16.33■□□□□ 0.2
RAD51C-209ENST00000482007 CAPN15O75808 1086 aa16.32■□□□□ 0.2
RAD51C-209ENST00000482007 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
RAD51C-209ENST00000482007 ATXN8OSP0DMR3 200 aa16.26■□□□□ 0.19
RAD51C-209ENST00000482007 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
RAD51C-209ENST00000482007 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
RAD51C-209ENST00000482007 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
RAD51C-209ENST00000482007 DSG3P32926 999 aa16.04■□□□□ 0.16
RAD51C-209ENST00000482007 ABCB7O75027 752 aa16.03■□□□□ 0.16
RAD51C-209ENST00000482007 POLA2Q14181 598 aa15.96■□□□□ 0.15
RAD51C-209ENST00000482007 MKRN4PQ13434 485 aaPredicted RBP15.58■□□□□ 0.08
RAD51C-209ENST00000482007 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
RAD51C-209ENST00000482007 FBLN2P98095 1184 aa15.55■□□□□ 0.08
RAD51C-209ENST00000482007 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
RAD51C-209ENST00000482007 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
RAD51C-209ENST00000482007 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
RAD51C-209ENST00000482007 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
RAD51C-209ENST00000482007 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
RAD51C-209ENST00000482007 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
RAD51C-209ENST00000482007 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
RAD51C-209ENST00000482007 FKBP8Q14318 412 aa15.17■□□□□ 0.02
RAD51C-209ENST00000482007 SSUH2Q9Y2M2 353 aa15.08■□□□□ 0
RAD51C-209ENST00000482007 AKT1S1Q96B36 256 aa15.05■□□□□ -0
RAD51C-209ENST00000482007 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
RAD51C-209ENST00000482007 REM2Q8IYK8 340 aaPredicted RBP14.95□□□□□ -0.02
RAD51C-209ENST00000482007 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
RAD51C-209ENST00000482007 ABCC9O60706 1549 aa14.87□□□□□ -0.03
RAD51C-209ENST00000482007 PROM2Q8N271 834 aa14.87□□□□□ -0.03
RAD51C-209ENST00000482007 CLEC11AQ9Y240 323 aa14.78□□□□□ -0.04
RAD51C-209ENST00000482007 PITPNM1O00562 1244 aa14.77□□□□□ -0.05
RAD51C-209ENST00000482007 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
RAD51C-209ENST00000482007 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
RAD51C-209ENST00000482007 STAG3Q9UJ98 1225 aa14.66□□□□□ -0.06
RAD51C-209ENST00000482007 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
RAD51C-209ENST00000482007 FBXO3Q9UK99 471 aa14.58□□□□□ -0.08
RAD51C-209ENST00000482007 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
RAD51C-209ENST00000482007 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
RAD51C-209ENST00000482007 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
RAD51C-209ENST00000482007 MIER1Q8N108 512 aa14.44□□□□□ -0.1
RAD51C-209ENST00000482007 PRKAR2AP13861 404 aaKnown RBP14.41□□□□□ -0.1
RAD51C-209ENST00000482007 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
RAD51C-209ENST00000482007 CREBZFQ9NS37 354 aa14.41□□□□□ -0.1
RAD51C-209ENST00000482007 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
RAD51C-209ENST00000482007 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
RAD51C-209ENST00000482007 POTEHQ6S545 545 aa14.27□□□□□ -0.13
RAD51C-209ENST00000482007 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
RAD51C-209ENST00000482007 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
RAD51C-209ENST00000482007 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
RAD51C-209ENST00000482007 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
RAD51C-209ENST00000482007 ZBTB47Q9UFB7 747 aaPredicted RBP14.16□□□□□ -0.14
RAD51C-209ENST00000482007 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
RAD51C-209ENST00000482007 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
RAD51C-209ENST00000482007 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAD51C-209ENST00000482007 HAX1O00165 279 aa14.05□□□□□ -0.16
RAD51C-209ENST00000482007 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
RAD51C-209ENST00000482007 NUBP1P53384 320 aa14.04□□□□□ -0.16
RAD51C-209ENST00000482007 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
RAD51C-209ENST00000482007 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
RAD51C-209ENST00000482007 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
RAD51C-209ENST00000482007 EVX2Q03828 476 aa13.97□□□□□ -0.17
RAD51C-209ENST00000482007 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms