RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
NELFCD-206ENST00000478389 RRP9O43818 475 aaKnown RBP11.03□□□□□ -0.64
NELFCD-206ENST00000478389 FAM177A1Q8N128 213 aaPredicted RBP11.03□□□□□ -0.64
NELFCD-206ENST00000478389 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.64
NELFCD-206ENST00000478389 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
NELFCD-206ENST00000478389 HSP90AA2PQ14568 343 aaPredicted RBP11.02□□□□□ -0.65
NELFCD-206ENST00000478389 CCDC184Q52MB2 194 aa11.02□□□□□ -0.65
NELFCD-206ENST00000478389 KDM4AO75164 1064 aa11.01□□□□□ -0.65
NELFCD-206ENST00000478389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.65
NELFCD-206ENST00000478389 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
NELFCD-206ENST00000478389 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
NELFCD-206ENST00000478389 SENP3-EIF4A1A0A087X0R7 540 aa11□□□□□ -0.65
NELFCD-206ENST00000478389 SECISBP2LQ93073 1101 aaKnown RBP11□□□□□ -0.65
NELFCD-206ENST00000478389 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
NELFCD-206ENST00000478389 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
NELFCD-206ENST00000478389 HSP90AA1P07900 732 aaKnown RBP11□□□□□ -0.65
NELFCD-206ENST00000478389 L1TD1Q5T7N2 865 aaKnown RBP11□□□□□ -0.65
NELFCD-206ENST00000478389 UACAQ9BZF9 1416 aa10.99□□□□□ -0.65
NELFCD-206ENST00000478389 CLSTN1O94985 981 aa10.99□□□□□ -0.65
NELFCD-206ENST00000478389 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
NELFCD-206ENST00000478389 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
NELFCD-206ENST00000478389 BRPF1P55201 1214 aaPredicted RBP10.98□□□□□ -0.65
NELFCD-206ENST00000478389 FAM43BQ6ZT52 329 aaPredicted RBP10.97□□□□□ -0.65
NELFCD-206ENST00000478389 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
NELFCD-206ENST00000478389 GRIN2AQ12879 1464 aa10.96□□□□□ -0.66
NELFCD-206ENST00000478389 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.66
NELFCD-206ENST00000478389 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.66
NELFCD-206ENST00000478389 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
NELFCD-206ENST00000478389 RRP1P56182 461 aaKnown RBP10.95□□□□□ -0.66
NELFCD-206ENST00000478389 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
NELFCD-206ENST00000478389 ABCA5Q8WWZ7 1642 aa10.93□□□□□ -0.66
NELFCD-206ENST00000478389 PLCD4Q9BRC7 762 aa10.93□□□□□ -0.66
NELFCD-206ENST00000478389 KCNG1Q9UIX4 513 aa10.93□□□□□ -0.66
NELFCD-206ENST00000478389 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
NELFCD-206ENST00000478389 OS9Q13438 667 aaPredicted RBP10.91□□□□□ -0.66
NELFCD-206ENST00000478389 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
NELFCD-206ENST00000478389 APBB1O00213 710 aa10.91□□□□□ -0.66
NELFCD-206ENST00000478389 EXOC6Q8TAG9 804 aa10.91□□□□□ -0.66
NELFCD-206ENST00000478389 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
NELFCD-206ENST00000478389 PBRM1Q86U86 1689 aa10.91□□□□□ -0.66
NELFCD-206ENST00000478389 FRAT2O75474 233 aaPredicted RBP10.9□□□□□ -0.66
NELFCD-206ENST00000478389 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
NELFCD-206ENST00000478389 KDM5BQ9UGL1 1544 aa10.9□□□□□ -0.66
NELFCD-206ENST00000478389 PRG4Q92954 1404 aaPredicted RBP10.9□□□□□ -0.66
NELFCD-206ENST00000478389 RRAGDQ9NQL2 400 aaPredicted RBP10.9□□□□□ -0.67
NELFCD-206ENST00000478389 CLCN1P35523 988 aa10.89□□□□□ -0.67
NELFCD-206ENST00000478389 MTUS2Q5JR59 1369 aa10.89□□□□□ -0.67
NELFCD-206ENST00000478389 RCAN3Q9UKA8 241 aa10.88□□□□□ -0.67
NELFCD-206ENST00000478389 ADAMTS12P58397 1594 aa10.88□□□□□ -0.67
NELFCD-206ENST00000478389 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
NELFCD-206ENST00000478389 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
NELFCD-206ENST00000478389 CHD1O14646 1710 aa10.88□□□□□ -0.67
NELFCD-206ENST00000478389 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
NELFCD-206ENST00000478389 PDE3BQ13370 1112 aa10.86□□□□□ -0.67
NELFCD-206ENST00000478389 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
NELFCD-206ENST00000478389 NEUROD2Q15784 382 aa10.86□□□□□ -0.67
NELFCD-206ENST00000478389 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
NELFCD-206ENST00000478389 PCF11O94913 1555 aaKnown RBP10.86□□□□□ -0.67
NELFCD-206ENST00000478389 CCDC27Q2M243 656 aa10.86□□□□□ -0.67
NELFCD-206ENST00000478389 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
NELFCD-206ENST00000478389 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
NELFCD-206ENST00000478389 FAM161AQ3B820 660 aa10.85□□□□□ -0.67
NELFCD-206ENST00000478389 KIF7Q2M1P5 1343 aa10.85□□□□□ -0.67
NELFCD-206ENST00000478389 KIAA0586Q9BVV6 1533 aa10.85□□□□□ -0.67
NELFCD-206ENST00000478389 TEX2Q8IWB9 1127 aa10.85□□□□□ -0.67
NELFCD-206ENST00000478389 PTPRGP23470 1445 aa10.84□□□□□ -0.67
NELFCD-206ENST00000478389 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
NELFCD-206ENST00000478389 CUL7Q14999 1698 aa10.84□□□□□ -0.67
NELFCD-206ENST00000478389 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
NELFCD-206ENST00000478389 CENPJQ9HC77 1338 aaPredicted RBP10.83□□□□□ -0.68
NELFCD-206ENST00000478389 NUP160Q12769 1436 aa10.83□□□□□ -0.68
NELFCD-206ENST00000478389 TPM2P07951 284 aa10.82□□□□□ -0.68
NELFCD-206ENST00000478389 PTMSP20962 102 aa10.82□□□□□ -0.68
NELFCD-206ENST00000478389 BECN1Q14457 450 aa10.82□□□□□ -0.68
NELFCD-206ENST00000478389 PNISRQ8TF01 805 aaKnown RBP10.82□□□□□ -0.68
NELFCD-206ENST00000478389 CTTNBP2Q8WZ74 1663 aa10.82□□□□□ -0.68
NELFCD-206ENST00000478389 KTN1Q86UP2 1357 aaKnown RBP10.82□□□□□ -0.68
NELFCD-206ENST00000478389 POLR1AO95602 1720 aaPredicted RBP10.82□□□□□ -0.68
NELFCD-206ENST00000478389 FOXD1Q16676 465 aa10.82□□□□□ -0.68
NELFCD-206ENST00000478389 GOLGA6L3A6NEY3 463 aa10.81□□□□□ -0.68
NELFCD-206ENST00000478389 PDCL3Q9H2J4 239 aa10.81□□□□□ -0.68
NELFCD-206ENST00000478389 NAIPQ13075 1403 aa10.81□□□□□ -0.68
NELFCD-206ENST00000478389 CEP170Q5SW79 1584 aa10.81□□□□□ -0.68
NELFCD-206ENST00000478389 PKD2Q13563 968 aa10.8□□□□□ -0.68
NELFCD-206ENST00000478389 CALD1Q05682 793 aaKnown RBP10.8□□□□□ -0.68
NELFCD-206ENST00000478389 CENPQQ7L2Z9 268 aaPredicted RBP10.8□□□□□ -0.68
NELFCD-206ENST00000478389 POGKQ9P215 609 aa10.8□□□□□ -0.68
NELFCD-206ENST00000478389 FHOD3Q2V2M9 1422 aa10.8□□□□□ -0.68
NELFCD-206ENST00000478389 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
NELFCD-206ENST00000478389 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
NELFCD-206ENST00000478389 MIA2Q96PC5 1412 aa10.79□□□□□ -0.68
NELFCD-206ENST00000478389 ROCK2O75116 1388 aaKnown RBP10.79□□□□□ -0.68
NELFCD-206ENST00000478389 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
NELFCD-206ENST00000478389 FYCO1Q9BQS8 1478 aa10.78□□□□□ -0.68
NELFCD-206ENST00000478389 ANAPC15P60006 121 aa10.78□□□□□ -0.68
NELFCD-206ENST00000478389 EFCAB5A4FU69 1503 aa10.78□□□□□ -0.68
NELFCD-206ENST00000478389 LRRIQ1Q96JM4 1722 aa10.78□□□□□ -0.68
NELFCD-206ENST00000478389 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
NELFCD-206ENST00000478389 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.68
NELFCD-206ENST00000478389 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms