RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 NCAPD3P42695 1498 aa10.4□□□□□ -0.74
SEC22C-211ENST00000451653 KIF21BO75037 1637 aa10.39□□□□□ -0.75
SEC22C-211ENST00000451653 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
SEC22C-211ENST00000451653 RTN4Q9NQC3 1192 aaKnown RBP10.39□□□□□ -0.75
SEC22C-211ENST00000451653 NESP48681 1621 aa10.39□□□□□ -0.75
SEC22C-211ENST00000451653 TNNT3P45378 269 aaPredicted RBP10.38□□□□□ -0.75
SEC22C-211ENST00000451653 GPATCH3Q96I76 525 aa10.38□□□□□ -0.75
SEC22C-211ENST00000451653 KTN1Q86UP2 1357 aaKnown RBP10.38□□□□□ -0.75
SEC22C-211ENST00000451653 USP35Q9P2H5 1018 aa10.38□□□□□ -0.75
SEC22C-211ENST00000451653 HDGFL2Q7Z4V5 671 aaPredicted RBP10.37□□□□□ -0.75
SEC22C-211ENST00000451653 TPM3P06753 285 aa10.37□□□□□ -0.75
SEC22C-211ENST00000451653 ZNF644Q9H582 1327 aaPredicted RBP10.37□□□□□ -0.75
SEC22C-211ENST00000451653 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
SEC22C-211ENST00000451653 PTPRGP23470 1445 aa10.36□□□□□ -0.75
SEC22C-211ENST00000451653 CHMP4AQ9BY43 222 aa10.36□□□□□ -0.75
SEC22C-211ENST00000451653 AEBP2Q6ZN18 517 aaPredicted RBP10.36□□□□□ -0.75
SEC22C-211ENST00000451653 PES1O00541 588 aaKnown RBP10.35□□□□□ -0.75
SEC22C-211ENST00000451653 PRDM2Q13029 1718 aa10.35□□□□□ -0.75
SEC22C-211ENST00000451653 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
SEC22C-211ENST00000451653 RAD21O60216 631 aa10.34□□□□□ -0.75
SEC22C-211ENST00000451653 PHLDB1Q86UU1 1377 aa10.34□□□□□ -0.75
SEC22C-211ENST00000451653 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
SEC22C-211ENST00000451653 WASHC2CQ9Y4E1 1318 aa10.34□□□□□ -0.75
SEC22C-211ENST00000451653 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
SEC22C-211ENST00000451653 HDAC5Q9UQL6 1122 aa10.33□□□□□ -0.76
SEC22C-211ENST00000451653 CALD1Q05682 793 aaKnown RBP10.33□□□□□ -0.76
SEC22C-211ENST00000451653 SYAP1Q96A49 352 aaPredicted RBP10.33□□□□□ -0.76
SEC22C-211ENST00000451653 PHF23Q9BUL5 403 aaPredicted RBP10.32□□□□□ -0.76
SEC22C-211ENST00000451653 TPD52L1Q16890 204 aaPredicted RBP10.32□□□□□ -0.76
SEC22C-211ENST00000451653 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
SEC22C-211ENST00000451653 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
SEC22C-211ENST00000451653 MEX3CQ5U5Q3 659 aaKnown RBP10.32□□□□□ -0.76
SEC22C-211ENST00000451653 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 PTMSP20962 102 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 TRAK1Q9UPV9 953 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 ARAP1Q96P48 1450 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 TRIM6-TRIM34B2RNG4 842 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 GBP4Q96PP9 640 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 ARID3AQ99856 593 aa10.31□□□□□ -0.76
SEC22C-211ENST00000451653 NOL10Q9BSC4 688 aaKnown RBP10.31□□□□□ -0.76
SEC22C-211ENST00000451653 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
SEC22C-211ENST00000451653 CFTRP13569 1480 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 U2AF1L5P0DN76 240 aaPredicted RBP10.3□□□□□ -0.76
SEC22C-211ENST00000451653 U2AF1Q01081 240 aaKnown RBP eCLIP10.3□□□□□ -0.76
SEC22C-211ENST00000451653 CYB5RLQ6IPT4 315 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.3□□□□□ -0.76
SEC22C-211ENST00000451653 TPM2P07951 284 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 RALBP1Q15311 655 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 RSPH4AQ5TD94 716 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 FGD6Q6ZV73 1430 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 AMOTL1Q8IY63 956 aa10.3□□□□□ -0.76
SEC22C-211ENST00000451653 PATL2C9JE40 543 aaKnown RBP10.29□□□□□ -0.76
SEC22C-211ENST00000451653 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
SEC22C-211ENST00000451653 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
SEC22C-211ENST00000451653 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
SEC22C-211ENST00000451653 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
SEC22C-211ENST00000451653 CUX1P39880 1505 aa10.29□□□□□ -0.76
SEC22C-211ENST00000451653 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
SEC22C-211ENST00000451653 SF3A1Q15459 793 aaKnown RBP10.29□□□□□ -0.76
SEC22C-211ENST00000451653 ITPRIPQ8IWB1 547 aa10.29□□□□□ -0.76
SEC22C-211ENST00000451653 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
SEC22C-211ENST00000451653 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
SEC22C-211ENST00000451653 RCAN3Q9UKA8 241 aa10.27□□□□□ -0.76
SEC22C-211ENST00000451653 EIF3AQ14152 1382 aaKnown RBP10.27□□□□□ -0.76
SEC22C-211ENST00000451653 MYOM3Q5VTT5 1437 aa10.27□□□□□ -0.77
SEC22C-211ENST00000451653 KIF3AQ9Y496 699 aa10.27□□□□□ -0.77
SEC22C-211ENST00000451653 EVA1CP58658 441 aa10.26□□□□□ -0.77
SEC22C-211ENST00000451653 PANK3Q9H999 370 aa10.26□□□□□ -0.77
SEC22C-211ENST00000451653 EID1Q9Y6B2 187 aa10.26□□□□□ -0.77
SEC22C-211ENST00000451653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
SEC22C-211ENST00000451653 CCDC43Q96MW1 224 aaKnown RBP10.26□□□□□ -0.77
SEC22C-211ENST00000451653 NCOA2Q15596 1464 aa10.26□□□□□ -0.77
SEC22C-211ENST00000451653 HMMRO75330 724 aa10.26□□□□□ -0.77
SEC22C-211ENST00000451653 SLC4A10Q6U841 1118 aa10.25□□□□□ -0.77
SEC22C-211ENST00000451653 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
SEC22C-211ENST00000451653 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
SEC22C-211ENST00000451653 USP47Q96K76 1375 aa10.25□□□□□ -0.77
SEC22C-211ENST00000451653 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
SEC22C-211ENST00000451653 DHX16O60231 1041 aaKnown RBP10.24□□□□□ -0.77
SEC22C-211ENST00000451653 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
SEC22C-211ENST00000451653 CCDC70Q6NSX1 233 aa10.24□□□□□ -0.77
SEC22C-211ENST00000451653 LTV1Q96GA3 475 aaPredicted RBP10.24□□□□□ -0.77
SEC22C-211ENST00000451653 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
SEC22C-211ENST00000451653 TPM1P09493 284 aa10.24□□□□□ -0.77
SEC22C-211ENST00000451653 SYNE3Q6ZMZ3 975 aa10.24□□□□□ -0.77
SEC22C-211ENST00000451653 OSCARQ8IYS5 282 aa10.24□□□□□ -0.77
SEC22C-211ENST00000451653 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 R3HCC1Q9Y3T6 440 aaKnown RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 AMPHP49418 695 aa10.23□□□□□ -0.77
SEC22C-211ENST00000451653 RRP12Q5JTH9 1297 aaKnown RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 PAF1Q8N7H5 531 aa10.23□□□□□ -0.77
SEC22C-211ENST00000451653 RRP7AQ9Y3A4 280 aaKnown RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
SEC22C-211ENST00000451653 GRIN2BQ13224 1484 aa10.23□□□□□ -0.77
SEC22C-211ENST00000451653 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
SEC22C-211ENST00000451653 PCMTD1Q96MG8 357 aaPredicted RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 GZF1Q9H116 711 aaPredicted RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
SEC22C-211ENST00000451653 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms