RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 CCER2I3L3R5 266 aa11.21□□□□□ -0.62
NLK-201ENST00000407008 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.62
NLK-201ENST00000407008 MYO5CQ9NQX4 1742 aa11.21□□□□□ -0.62
NLK-201ENST00000407008 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
NLK-201ENST00000407008 TMC1Q8TDI8 760 aa11.2□□□□□ -0.62
NLK-201ENST00000407008 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
NLK-201ENST00000407008 MRS2Q9HD23 443 aa11.19□□□□□ -0.62
NLK-201ENST00000407008 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
NLK-201ENST00000407008 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
NLK-201ENST00000407008 MLECQ14165 292 aa11.19□□□□□ -0.62
NLK-201ENST00000407008 TEX14Q8IWB6 1497 aa11.18□□□□□ -0.62
NLK-201ENST00000407008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.18□□□□□ -0.624e-6■■■□□ 15.9
NLK-201ENST00000407008 RPRD2Q5VT52 1461 aaKnown RBP11.18□□□□□ -0.62
NLK-201ENST00000407008 ZCCHC11Q5TAX3 1644 aaKnown RBP11.17□□□□□ -0.62
NLK-201ENST00000407008 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
NLK-201ENST00000407008 DHX29Q7Z478 1369 aaKnown RBP11.17□□□□□ -0.62
NLK-201ENST00000407008 USP47Q96K76 1375 aa11.17□□□□□ -0.62
NLK-201ENST00000407008 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
NLK-201ENST00000407008 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
NLK-201ENST00000407008 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
NLK-201ENST00000407008 ARAP3Q8WWN8 1544 aa11.15□□□□□ -0.62
NLK-201ENST00000407008 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
NLK-201ENST00000407008 ERCC6L2Q5T890 1561 aa11.15□□□□□ -0.62
NLK-201ENST00000407008 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
NLK-201ENST00000407008 NEFMP07197 916 aa11.14□□□□□ -0.63
NLK-201ENST00000407008 TRAPPC8Q9Y2L5 1435 aa11.14□□□□□ -0.63
NLK-201ENST00000407008 PLPPR3Q6T4P5 718 aa11.13□□□□□ -0.63
NLK-201ENST00000407008 RAPGEF3O95398 923 aa11.13□□□□□ -0.63
NLK-201ENST00000407008 POGKQ9P215 609 aa11.13□□□□□ -0.63
NLK-201ENST00000407008 NEO1Q92859 1461 aa11.13□□□□□ -0.63
NLK-201ENST00000407008 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
NLK-201ENST00000407008 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
NLK-201ENST00000407008 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
NLK-201ENST00000407008 CDC42BPAQ5VT25 1732 aa11.12□□□□□ -0.63
NLK-201ENST00000407008 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
NLK-201ENST00000407008 A2MP01023 1474 aa11.11□□□□□ -0.63
NLK-201ENST00000407008 SLC52A1Q9NWF4 448 aa11.11□□□□□ -0.63
NLK-201ENST00000407008 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
NLK-201ENST00000407008 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
NLK-201ENST00000407008 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.63
NLK-201ENST00000407008 FAM135AQ9P2D6 1515 aa11.1□□□□□ -0.63
NLK-201ENST00000407008 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
NLK-201ENST00000407008 RPGRIP1LQ68CZ1 1315 aa11.1□□□□□ -0.63
NLK-201ENST00000407008 ATP7AQ04656 1500 aa11.09□□□□□ -0.63
NLK-201ENST00000407008 RALBP1Q15311 655 aa11.09□□□□□ -0.63
NLK-201ENST00000407008 ABCC1P33527 1531 aa11.09□□□□□ -0.63
NLK-201ENST00000407008 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
NLK-201ENST00000407008 CCDC7Q96M83 1385 aa11.08□□□□□ -0.64
NLK-201ENST00000407008 POGZQ7Z3K3 1410 aa11.08□□□□□ -0.64
NLK-201ENST00000407008 PZPP20742 1482 aa11.08□□□□□ -0.64
NLK-201ENST00000407008 PKNOX2Q96KN3 472 aa11.07□□□□□ -0.64
NLK-201ENST00000407008 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
NLK-201ENST00000407008 NBPF8Q3BBV2 869 aa11.06□□□□□ -0.64
NLK-201ENST00000407008 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
NLK-201ENST00000407008 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
NLK-201ENST00000407008 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
NLK-201ENST00000407008 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
NLK-201ENST00000407008 ARHGEF12Q9NZN5 1544 aa11.05□□□□□ -0.64
NLK-201ENST00000407008 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
NLK-201ENST00000407008 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
NLK-201ENST00000407008 PLXNC1O60486 1568 aa11.04□□□□□ -0.64
NLK-201ENST00000407008 CROCC2H7BZ55 1655 aa11.03□□□□□ -0.64
NLK-201ENST00000407008 KIF7Q2M1P5 1343 aa11.03□□□□□ -0.64
NLK-201ENST00000407008 SRPK2P78362 688 aaKnown RBP11.02□□□□□ -0.65
NLK-201ENST00000407008 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.65
NLK-201ENST00000407008 KDM5DQ9BY66 1539 aa11.01□□□□□ -0.65
NLK-201ENST00000407008 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
NLK-201ENST00000407008 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
NLK-201ENST00000407008 CENPJQ9HC77 1338 aaPredicted RBP11□□□□□ -0.65
NLK-201ENST00000407008 STK26Q9P289 416 aa11□□□□□ -0.65
NLK-201ENST00000407008 EVC2Q86UK5 1308 aa11□□□□□ -0.65
NLK-201ENST00000407008 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
NLK-201ENST00000407008 HDGFL2Q7Z4V5 671 aaPredicted RBP11□□□□□ -0.65
NLK-201ENST00000407008 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
NLK-201ENST00000407008 NLRP13Q86W25 1043 aa11□□□□□ -0.65
NLK-201ENST00000407008 PRKRIP1Q9H875 184 aaPredicted RBP11□□□□□ -0.65
NLK-201ENST00000407008 TRAK1Q9UPV9 953 aa11□□□□□ -0.65
NLK-201ENST00000407008 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
NLK-201ENST00000407008 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
NLK-201ENST00000407008 TERF2IPQ9NYB0 399 aa10.98□□□□□ -0.65
NLK-201ENST00000407008 SENP3Q9H4L4 574 aaPredicted RBP10.98□□□□□ -0.65
NLK-201ENST00000407008 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
NLK-201ENST00000407008 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
NLK-201ENST00000407008 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
NLK-201ENST00000407008 MAGI2Q86UL8 1455 aa10.97□□□□□ -0.65
NLK-201ENST00000407008 ZFYVE16Q7Z3T8 1539 aa10.97□□□□□ -0.65
NLK-201ENST00000407008 KDM6BO15054 1643 aa10.97□□□□□ -0.65
NLK-201ENST00000407008 CFAP70Q5T0N1 1121 aa10.96□□□□□ -0.65
NLK-201ENST00000407008 ATP10AO60312 1499 aa10.96□□□□□ -0.65
NLK-201ENST00000407008 MORC1Q86VD1 984 aa10.96□□□□□ -0.65
NLK-201ENST00000407008 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.66
NLK-201ENST00000407008 NBPF1Q3BBV0 1214 aa10.96□□□□□ -0.66
NLK-201ENST00000407008 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
NLK-201ENST00000407008 NUTM2DQ5VT03 806 aaPredicted RBP10.95□□□□□ -0.66
NLK-201ENST00000407008 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
NLK-201ENST00000407008 PANK3Q9H999 370 aa10.95□□□□□ -0.66
NLK-201ENST00000407008 SAFB2Q14151 953 aaKnown RBP eCLIP10.95□□□□□ -0.66
NLK-201ENST00000407008 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.94□□□□□ -0.66
NLK-201ENST00000407008 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
NLK-201ENST00000407008 PRAG1Q86YV5 1406 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms