RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 PtmsQ9D0J8 101 aaKnown RBP22,48■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Usp47Q8BY87 1376 aa22,47■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Usp40Q8BWR4 1235 aa22,47■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Adam1bQ8R534 806 aa22,47■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Ipo8Q7TMY7 1010 aa22,46■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Mink1Q9JM52 1308 aa22,45■■□□□ 1,19
Smarcc1-207ENSMUST00000199896 Gm973E9Q295 1059 aa22,45■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Inpp5dQ9ES52 1191 aa22,44■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Synj1Q8CHC4 1574 aa22,44■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 UacaQ8CGB3 1411 aa22,44■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Slc4a10Q5DTL9 1118 aa22,44■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 CrebrfQ8CDG5 640 aaKnown RBP22,44■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Dnttip2Q8R2M2 758 aaKnown RBP22,42■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Soga1E1U8D0 1418 aa22,41■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Ccdc146E9Q9F7 977 aa22,41■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Ppm1fQ8CGA0 452 aa22,4■■□□□ 1,18
Smarcc1-207ENSMUST00000199896 Ccdc60Q8C4J0 545 aa22,39■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Jph4Q80WT0 628 aa22,37■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Ciz1Q8VEH2 845 aa22,37■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Tpm3-rs7D3Z2H9 248 aa22,37■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Tdrd9Q14BI7 1383 aa22,37■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 R3hcc1Q8BSI6 488 aa22,36■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Crybg2B7ZCC2 1516 aa22,36■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Cc2d2bA0A286YDU8 1405 aa22,35■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Gm21190A0A0G2JGJ6 266 aa22,35■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Kif7B7ZNG0 1348 aa22,34■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 GsdmaQ9EST1 446 aa22,34■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Fam184bQ0KK56 942 aa22,33■■□□□ 1,17
Smarcc1-207ENSMUST00000199896 Cc2d1aQ8K1A6 943 aa22,32■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Smarce1O54941 411 aaKnown RBP22,31■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 AppP12023 770 aa22,31■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Smarca4Q3TKT4 1613 aaKnown RBP22,3■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Bcl11bQ99PV8 884 aa22,27■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Ipo9Q91YE6 1041 aa22,27■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Mical1Q8VDP3 1048 aa22,27■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 G3bp1P97855 465 aaKnown RBP22,27■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Shroom4Q1W617 1475 aa22,27■■□□□ 1,16
Smarcc1-207ENSMUST00000199896 Chmp7Q8R1T1 451 aa22,26■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Rock1P70335 1354 aa22,26■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Fyb1O35601 819 aa22,25■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 ErbinQ80TH2 1402 aa22,24■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Irx3P81067 507 aa22,24■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Cgnl1Q6AW69 1298 aa22,23■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Smarca2Q6DIC0 1577 aa22,23■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Smc4Q8CG47 1286 aa22,23■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Ccer1Q9CQL2 403 aa22,23■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Esx1O88933 382 aa22,22■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 AU015836B2RUM3 263 aa22,22■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Smg6P61406 1418 aaKnown RBP22,22■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Atp6v1dP57746 247 aa22,21■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Zscan10Q3URR7 782 aa22,21■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Dapk1Q80YE7 1442 aa22,21■■□□□ 1,15
Smarcc1-207ENSMUST00000199896 Ncoa2Q61026 1462 aa22,2■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Pip4k2bQ80XI4 416 aa22,19■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Vps53Q8CCB4 832 aa22,19■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Rab11fip3Q8CHD8 1047 aa22,19■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 ChgaP26339 463 aaKnown RBP22,18■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Isy1Q69ZQ2 285 aaKnown RBP22,18■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Chrna2Q91X60 512 aa22,18■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Tomm22Q9CPQ3 142 aa22,17■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Ccdc47Q9D024 483 aaKnown RBP22,16■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Eif2s2Q99L45 331 aaKnown RBP22,15■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Ylpm1Q9R0I7 1386 aaKnown RBP22,15■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Tpd52l1O54818 204 aa22,15■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Triml2E9PW10 424 aa22,15■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Gsto1O09131 240 aa22,15■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Cald1E9QA15 768 aaKnown RBP22,14■■□□□ 1,14
Smarcc1-207ENSMUST00000199896 Calcoco2A2A6M5 331 aa22,14■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Ralbp1Q62172 648 aa22,13■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Q9D9H8 365 aa22,13■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 MsnP26041 577 aaKnown RBP22,12■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Cttnbp2B9EJA2 1648 aa22,12■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Dhx16G3X8X0 1044 aaKnown RBP22,11■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Pde4cQ3UEI1 686 aa22,11■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Usp16Q99LG0 825 aa22,11■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 SlkO54988 1233 aa22,1■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Nsd2Q8BVE8 1365 aa22,1■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Puf60Q3UEB3 564 aaKnown RBP22,09■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Atp2b2Q9R0K7 1198 aa22,08■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Atf3Q60765 181 aa22,08■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Tceal9Q9DD24 104 aa22,08■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 Ttll5Q8CHB8 1328 aa22,08■■□□□ 1,13
Smarcc1-207ENSMUST00000199896 RdxP26043 583 aaKnown RBP22,07■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Filip1lQ6P6L0 1131 aa22,07■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Gm21969J3QJZ1 289 aa22,07■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Sirt1Q923E4 737 aa22,06■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 TatQ8QZR1 454 aa22,06■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 St18Q80TY4 1045 aa22,05■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Neurod6P48986 337 aa22,05■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Gpatch11Q3UFS4 262 aa22,05■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Nolc1E9Q5C9 702 aaKnown RBP22,05■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Ric3Q8BPM6 367 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Sf3a1Q8K4Z5 791 aaKnown RBP22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Bcl2l13P59017 434 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Gsdma3Q5Y4Y6 464 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Rad54l2Q99NG0 1466 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Iqgap2Q3UQ44 1575 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Zfp644E9QA22 1323 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 Krt82Q99M74 516 aa22,04■■□□□ 1,12
Smarcc1-207ENSMUST00000199896 BccipQ9CWI3 316 aa22,04■■□□□ 1,12
Retrieved 100 of 22,080 RNA–protein pairs in 26,6 ms