RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 EspnQ9ET47 871 aa17.32■□□□□ 0.36
Col18a1-201ENSMUST00000072755 MlecQ6ZQI3 291 aaKnown RBP17.31■□□□□ 0.36
Col18a1-201ENSMUST00000072755 HdgfP51859 237 aaKnown RBP17.31■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Pde3bQ61409 1100 aa17.31■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Cux1P53564 1515 aa17.3■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Cc2d2bA0A286YDU8 1405 aa17.3■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Ggt6Q6PDE7 497 aa17.29■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Dnai1Q8C0M8 701 aa17.29■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Gtf2a1Q99PM3 378 aa17.28■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Soga1E1U8D0 1418 aa17.27■□□□□ 0.36
Col18a1-201ENSMUST00000072755 CrbnQ8C7D2 445 aa17.27■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Ccar1Q8CH18 1146 aaKnown RBP17.27■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Utp14aQ640M1 767 aaKnown RBP17.27■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Tnnt1O88346 262 aa17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ddrgk1Q80WW9 315 aa17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Polr1aO35134 1717 aaKnown RBP17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ecm2Q5FW85 670 aa17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Nol10Q5RJG1 687 aaKnown RBP17.25■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Rassf8Q8CJ96 419 aa17.25■□□□□ 0.35
Col18a1-201ENSMUST00000072755 PtmsQ9D0J8 101 aaKnown RBP17.25■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Jph4Q80WT0 628 aa17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Pabpn1Q8CCS6 302 aaKnown RBP17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Map7d2A2AG50 781 aa17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Shroom4Q1W617 1475 aa17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 VgfQ0VGU4 617 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 AcrbpQ3V140 540 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Pank3Q8R2W9 370 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ksr2Q3UVC0 959 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Znf330Q922H9 316 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ap3b2Q9JME5 1082 aa17.22■□□□□ 0.35
Col18a1-201ENSMUST00000072755 DmtnQ9WV69 405 aa17.22■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Efcab5A0JP43 1406 aa17.21■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Cluap1Q8R3P7 413 aa17.21■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Cc2d2aQ8CFW7 1633 aa17.2■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Adam1bQ8R534 806 aa17.2■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Smg6P61406 1418 aaKnown RBP17.19■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Tdrd9Q14BI7 1383 aa17.19■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Usp40Q8BWR4 1235 aa17.19■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Tsen2Q6P7W5 460 aa17.18■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Ipo8Q7TMY7 1010 aa17.18■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Top2aQ01320 1528 aaKnown RBP17.17■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Shq1Q7TMX5 569 aa17.16■□□□□ 0.34
Col18a1-201ENSMUST00000072755 SlkO54988 1233 aa17.16■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Ankrd36D3Z4K0 1415 aa17.15■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Stk31Q99MW1 1018 aa17.15■□□□□ 0.34
Col18a1-201ENSMUST00000072755 ErbinQ80TH2 1402 aa17.15■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Inpp5dQ9ES52 1191 aa17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Dapk1Q80YE7 1442 aa17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Mfap1aC0HKD8 439 aaKnown RBP17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Mfap1bC0HKD9 439 aaKnown RBP17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 AampJ3QN89 436 aa17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 MecomP14404 1042 aa17.13■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Fam184bQ0KK56 942 aa17.13■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Nsd2Q8BVE8 1365 aa17.13■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rbm10Q99KG3 930 aaKnown RBP17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rock1P70335 1354 aa17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Anapc15P60007 132 aa17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Pibf1E9Q6K3 756 aa17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Iffo2Q8R2V2 512 aa17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Kiaa0754Q69ZZ9 979 aa17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Senp3Q9EP97 568 aaKnown RBP17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Kif7B7ZNG0 1348 aa17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Gm973E9Q295 1059 aa17.1■□□□□ 0.33
Col18a1-201ENSMUST00000072755 GsdmaQ9EST1 446 aa17.1■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rad54l2Q99NG0 1466 aa17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Smarce1O54941 411 aaKnown RBP17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Urb2E9Q7L1 1524 aaKnown RBP17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rab11fip3Q8CHD8 1047 aa17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Cabp4Q8VHC5 271 aa17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Vps8Q0P5W1 1427 aa17.08■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Mink1Q9JM52 1308 aa17.08■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Cgnl1Q6AW69 1298 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Pcmtd1P59913 357 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 NrkQ9R0G8 1455 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Chmp3Q9CQ10 224 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Becn1O88597 448 aa17.06■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Pak3Q61036 559 aa17.06■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Duox2A2AQ99 1517 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Prdm16A2A935 1275 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Dnai2A2AC93 623 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Zscan10Q3URR7 782 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Brpf1B2RRD7 1212 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 R3hcc1Q8BSI6 488 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Ccdc60Q8C4J0 545 aa17.04■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Ush1cQ9ES64 910 aa17.03■□□□□ 0.32
Col18a1-201ENSMUST00000072755 GorabQ8BRM2 368 aa17.03■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Ylpm1Q9R0I7 1386 aaKnown RBP17.02■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Tpm2P58774 284 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Ralbp1Q62172 648 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Ift140E9PY46 1464 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Arhgap5P97393 1501 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 CgnP59242 1191 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Znf771Q8BJ90 317 aa17■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Atp6v1dP57746 247 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 G3bp1P97855 465 aaKnown RBP16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Pde4cQ3UEI1 686 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Ccdc146E9Q9F7 977 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Slc4a10Q5DTL9 1118 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Fam13bQ8K2H3 851 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Naip1Q9QWK5 1403 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms