RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 EspnQ9ET47 871 aa17.32■□□□□ 0.36
Col18a1-201ENSMUST00000072755 MlecQ6ZQI3 291 aaKnown RBP17.31■□□□□ 0.36
Col18a1-201ENSMUST00000072755 HdgfP51859 237 aaKnown RBP17.31■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Pde3bQ61409 1100 aa17.31■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Cux1P53564 1515 aa17.3■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Cc2d2bA0A286YDU8 1405 aa17.3■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Ggt6Q6PDE7 497 aa17.29■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Dnai1Q8C0M8 701 aa17.29■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Gtf2a1Q99PM3 378 aa17.28■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Soga1E1U8D0 1418 aa17.27■□□□□ 0.36
Col18a1-201ENSMUST00000072755 CrbnQ8C7D2 445 aa17.27■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Ccar1Q8CH18 1146 aaKnown RBP17.27■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Utp14aQ640M1 767 aaKnown RBP17.27■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Tnnt1O88346 262 aa17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ddrgk1Q80WW9 315 aa17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Polr1aO35134 1717 aaKnown RBP17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ecm2Q5FW85 670 aa17.26■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Nol10Q5RJG1 687 aaKnown RBP17.25■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Rassf8Q8CJ96 419 aa17.25■□□□□ 0.35
Col18a1-201ENSMUST00000072755 PtmsQ9D0J8 101 aaKnown RBP17.25■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Jph4Q80WT0 628 aa17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Pabpn1Q8CCS6 302 aaKnown RBP17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Map7d2A2AG50 781 aa17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Shroom4Q1W617 1475 aa17.24■□□□□ 0.35
Col18a1-201ENSMUST00000072755 VgfQ0VGU4 617 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 AcrbpQ3V140 540 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Pank3Q8R2W9 370 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ksr2Q3UVC0 959 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Znf330Q922H9 316 aa17.23■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Ap3b2Q9JME5 1082 aa17.22■□□□□ 0.35
Col18a1-201ENSMUST00000072755 DmtnQ9WV69 405 aa17.22■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Efcab5A0JP43 1406 aa17.21■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Cluap1Q8R3P7 413 aa17.21■□□□□ 0.35
Col18a1-201ENSMUST00000072755 Cc2d2aQ8CFW7 1633 aa17.2■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Adam1bQ8R534 806 aa17.2■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Smg6P61406 1418 aaKnown RBP17.19■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Tdrd9Q14BI7 1383 aa17.19■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Usp40Q8BWR4 1235 aa17.19■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Tsen2Q6P7W5 460 aa17.18■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Ipo8Q7TMY7 1010 aa17.18■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Top2aQ01320 1528 aaKnown RBP17.17■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Shq1Q7TMX5 569 aa17.16■□□□□ 0.34
Col18a1-201ENSMUST00000072755 SlkO54988 1233 aa17.16■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Ankrd36D3Z4K0 1415 aa17.15■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Stk31Q99MW1 1018 aa17.15■□□□□ 0.34
Col18a1-201ENSMUST00000072755 ErbinQ80TH2 1402 aa17.15■□□□□ 0.34
Col18a1-201ENSMUST00000072755 Inpp5dQ9ES52 1191 aa17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Dapk1Q80YE7 1442 aa17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Mfap1aC0HKD8 439 aaKnown RBP17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Mfap1bC0HKD9 439 aaKnown RBP17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 AampJ3QN89 436 aa17.14■□□□□ 0.33
Col18a1-201ENSMUST00000072755 MecomP14404 1042 aa17.13■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Fam184bQ0KK56 942 aa17.13■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Nsd2Q8BVE8 1365 aa17.13■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rbm10Q99KG3 930 aaKnown RBP17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rock1P70335 1354 aa17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Anapc15P60007 132 aa17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Pibf1E9Q6K3 756 aa17.12■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Iffo2Q8R2V2 512 aa17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Kiaa0754Q69ZZ9 979 aa17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Senp3Q9EP97 568 aaKnown RBP17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Kif7B7ZNG0 1348 aa17.11■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Gm973E9Q295 1059 aa17.1■□□□□ 0.33
Col18a1-201ENSMUST00000072755 GsdmaQ9EST1 446 aa17.1■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rad54l2Q99NG0 1466 aa17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Smarce1O54941 411 aaKnown RBP17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Urb2E9Q7L1 1524 aaKnown RBP17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Rab11fip3Q8CHD8 1047 aa17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Cabp4Q8VHC5 271 aa17.09■□□□□ 0.33
Col18a1-201ENSMUST00000072755 Vps8Q0P5W1 1427 aa17.08■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Mink1Q9JM52 1308 aa17.08■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Cgnl1Q6AW69 1298 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Pcmtd1P59913 357 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 NrkQ9R0G8 1455 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Chmp3Q9CQ10 224 aa17.07■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Becn1O88597 448 aa17.06■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Pak3Q61036 559 aa17.06■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Duox2A2AQ99 1517 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Prdm16A2A935 1275 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Dnai2A2AC93 623 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Zscan10Q3URR7 782 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Brpf1B2RRD7 1212 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 R3hcc1Q8BSI6 488 aa17.05■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Ccdc60Q8C4J0 545 aa17.04■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Ush1cQ9ES64 910 aa17.03■□□□□ 0.32
Col18a1-201ENSMUST00000072755 GorabQ8BRM2 368 aa17.03■□□□□ 0.32
Col18a1-201ENSMUST00000072755 Ylpm1Q9R0I7 1386 aaKnown RBP17.02■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Tpm2P58774 284 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Ralbp1Q62172 648 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Ift140E9PY46 1464 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Arhgap5P97393 1501 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 CgnP59242 1191 aa17.01■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Znf771Q8BJ90 317 aa17■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Atp6v1dP57746 247 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 G3bp1P97855 465 aaKnown RBP16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Pde4cQ3UEI1 686 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Ccdc146E9Q9F7 977 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Slc4a10Q5DTL9 1118 aa16.99■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Fam13bQ8K2H3 851 aa16.98■□□□□ 0.31
Col18a1-201ENSMUST00000072755 Naip1Q9QWK5 1403 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms