RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Ints3Q7TPD0 1041 aaKnown RBP13.91□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Mfsd10Q9D2V8 456 aaKnown RBP13.91□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 MarsQ68FL6 902 aaKnown RBP13.9□□□□□ -0.18
Ccdc54-201ENSMUST00000062439 Ano8Q6PB70 1060 aa13.86□□□□□ -0.19
Ccdc54-201ENSMUST00000062439 AW822073A0A0N4SUK1 652 aa13.85□□□□□ -0.19
Ccdc54-201ENSMUST00000062439 OatP29758 439 aa13.82□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 Atf4Q06507 349 aa13.82□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 Ccdc102aQ3TMW1 549 aa13.82□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 Pcdhgb4Q91XX6 912 aa13.8□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 Pcdh10E9PXQ7 1057 aa13.78□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 Rbm46P86049 533 aa13.78□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 OplahQ8K010 1288 aa13.78□□□□□ -0.2
Ccdc54-201ENSMUST00000062439 Rgs9O54828 675 aa13.77□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Adnp2Q8CHC8 1165 aaKnown RBP13.77□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Klra4Q60651 263 aa13.76□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Col9a1Q05722 921 aa13.74□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Prr18Q6PAN7 307 aa13.74□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Rem2Q8VEL9 341 aa13.74□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Gm20503G3UZK1 150 aa13.73□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Fnbp4Q6ZQ03 1031 aa13.73□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Fmr1nbQ80ZA7 238 aa13.73□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Speer3W4VSP1 261 aa13.73□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Trbv21A0A0A6YX06 97 aa13.72□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Dsg2O55111 1122 aa13.72□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 NischQ80TM9 1593 aa13.71□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Prpmp5E9PXN1 296 aa13.71□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Abcf1Q6P542 837 aaKnown RBP13.71□□□□□ -0.21
Ccdc54-201ENSMUST00000062439 Ttll13A4Q9F6 804 aa13.7□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 Rhox13F6YCR7 232 aa13.7□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 St18Q80TY4 1045 aa13.68□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 Dnajc14Q921R4 703 aa13.68□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 TsksO54887 585 aa13.66□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 Adam19O35674 920 aa13.65□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 Cyp8b1O88962 500 aa13.65□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 Dcbld2Q91ZV3 769 aa13.65□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 SmapQ9R0P4 181 aaKnown RBP13.65□□□□□ -0.22
Ccdc54-201ENSMUST00000062439 Spaca7Q9D2S4 182 aa13.64□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Pola2P33611 600 aa13.63□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Secisbp2lQ6A098 1086 aaKnown RBP13.62□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Wdr44Q6NVE8 915 aa13.62□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Rccd1Q8BTU7 377 aa13.62□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Rnf225Q9D7D1 332 aa13.62□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Large2Q5XPT3 690 aa13.59□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 Sulf1Q8K007 870 aa13.59□□□□□ -0.23
Ccdc54-201ENSMUST00000062439 MetrnQ8C1Q4 291 aa13.57□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Gpc1Q9QZF2 557 aa13.57□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Ptcd1Q8C2E4 695 aaKnown RBP13.56□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Clcn1Q64347 994 aa13.55□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 FcrlaQ920A9 352 aa13.54□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Q9CQ90 155 aa13.54□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Ttbk1Q6PCN3 1308 aa13.54□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Pbx2O35984 430 aa13.53□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Gigyf2Q6Y7W8 1291 aaKnown RBP13.53□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 MlecQ6ZQI3 291 aaKnown RBP13.53□□□□□ -0.24
Ccdc54-201ENSMUST00000062439 Arid5bQ8BM75 1188 aaKnown RBP13.52□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Kcnc4Q8R1C0 628 aa13.52□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Znf354bQ9QXT9 601 aa13.52□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 EdaraddQ8VHX2 208 aa13.51□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Tbc1d12Q6A039 696 aa13.5□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Map2k7Q8CE90 535 aa13.47□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Ms4a4cQ9D3F6 226 aa13.47□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Trim32Q8CH72 655 aa13.46□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Apbb1Q9QXJ1 710 aa13.46□□□□□ -0.25
Ccdc54-201ENSMUST00000062439 Slc27a5Q4LDG0 689 aa13.45□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Adamts19P59509 1210 aa13.43□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Erbb3Q61526 1339 aa13.42□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Nkx2-3P97334 362 aa13.42□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Gm11939A2A592 99 aa13.41□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Evx2P49749 475 aa13.41□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Scarf1Q5ND28 820 aa13.4□□□□□ -0.26
Ccdc54-201ENSMUST00000062439 Myo1bP46735 1107 aa13.39□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Pcdhb16Q91Y03 802 aa13.39□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Dsc3P55850 896 aa13.38□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Nckap5lQ6GQX2 1323 aa13.37□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Armc3A2AU72 881 aa13.36□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 March10E9PX79 788 aa13.36□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Tie1Q06806 1134 aa13.36□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Cdv3Q4VAA2 281 aaKnown RBP13.36□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Fam160a1Q505K2 1081 aa13.36□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 LrgukQ9D5S7 820 aa13.35□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Smpd1Q04519 627 aa13.34□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Emid1Q91VF5 444 aa13.34□□□□□ -0.27
Ccdc54-201ENSMUST00000062439 Usp46P62069 366 aa13.33□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Rnf40Q3U319 1001 aa13.31□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Igflr1Q3U4N7 345 aa13.31□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Mical1Q8VDP3 1048 aa13.31□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Caskin2Q8VHK1 1201 aa13.31□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Stk11ipQ3TAA7 1072 aa13.3□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Abcc9P70170 1546 aa13.29□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 ClmQ7TSN2 230 aa13.29□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Tpcn1Q9EQJ0 817 aa13.29□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Chtf18Q8BIW9 969 aa13.28□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 Creld1Q91XD7 420 aa13.28□□□□□ -0.28
Ccdc54-201ENSMUST00000062439 ElnP54320 860 aa13.27□□□□□ -0.29
Ccdc54-201ENSMUST00000062439 Zfp943Q6NZP4 507 aa13.27□□□□□ -0.29
Ccdc54-201ENSMUST00000062439 Eml3Q8VC03 897 aa13.27□□□□□ -0.29
Ccdc54-201ENSMUST00000062439 Slc5a4bQ91ZP4 660 aa13.26□□□□□ -0.29
Ccdc54-201ENSMUST00000062439 Dph2Q9CR25 489 aa13.26□□□□□ -0.29
Ccdc54-201ENSMUST00000062439 Abcc8B2RUS7 1588 aa13.25□□□□□ -0.29
Ccdc54-201ENSMUST00000062439 Hmx1O70218 332 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms