RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 GphnQ8BUV3 769 aaKnown RBP9.7□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Sox12Q04890 314 aa9.7□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Hdac5Q9Z2V6 1113 aa9.7□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Fan1Q69ZT1 1020 aa9.69□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Il16O54824 1322 aa9.69□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Gcc2Q8CHG3 1679 aa9.69□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Znf316Q6PGE4 1016 aa9.69□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Dennd4bQ3U1Y4 1499 aa9.69□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Naip2Q9QUK4 1447 aa9.68□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Kiaa1551Q5DTW7 1521 aa9.68□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Ttc21bQ0HA38 1315 aa9.67□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Adgrb2Q8CGM1 1561 aa9.67□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Cd109Q8R422 1442 aa9.67□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Stag3O70576 1240 aa9.66□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Utp14aQ640M1 767 aaKnown RBP9.66□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Ggt6Q6PDE7 497 aa9.66□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Evi5lH3BKQ3 813 aa9.66□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Dhx9O70133 1380 aaKnown RBP9.65□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Ttc37F8VPK0 1563 aa9.65□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Abca8bQ8K440 1620 aa9.65□□□□□ -0.86
Bdnf-201ENSMUST00000053317 DroshaQ5HZJ0 1373 aaKnown RBP9.65□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Kdm6bQ5NCY0 1641 aa9.65□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Ssh2Q5SW75 1423 aa9.64□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Camsap2Q8C1B1 1461 aa9.64□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Znf518aB2RRF6 1478 aaKnown RBP9.64□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Cnga1P29974 684 aa9.64□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Atp10aO54827 1508 aa9.64□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Gli2Q0VGT2 1544 aa9.64□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Lmtk2Q3TYD6 1471 aa9.63□□□□□ -0.87
Bdnf-201ENSMUST00000053317 IqubQ8CDK3 788 aa9.63□□□□□ -0.87
Bdnf-201ENSMUST00000053317 ErbinQ80TH2 1402 aa9.63□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Asxl2Q8BZ32 1370 aa9.62□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Naip6Q9JIB6 1403 aa9.62□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Cdc42bpaQ3UU96 1719 aa9.61□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Nsd2Q8BVE8 1365 aa9.61□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Rnf17Q99MV7 1640 aa9.61□□□□□ -0.87
Bdnf-201ENSMUST00000053317 HnrnpmQ9D0E1 729 aaKnown RBP9.61□□□□□ -0.87
Bdnf-201ENSMUST00000053317 AdgbG3UZ78 1657 aa9.6□□□□□ -0.87
Bdnf-201ENSMUST00000053317 AglF8VPN4 1532 aa9.6□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Cfap74Q3UY96 1578 aa9.59□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Cul7Q8VE73 1689 aa9.59□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Myom3A2ABU4 1439 aa9.59□□□□□ -0.87
Bdnf-201ENSMUST00000053317 Usp47Q8BY87 1376 aa9.58□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Fhad1A6PWD2 1420 aa9.58□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Exosc9Q9JHI7 438 aaKnown RBP9.57□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Fam208aQ69ZR9 1610 aaKnown RBP9.57□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Card11Q8CIS0 1159 aa9.57□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Ncapd3Q6ZQK0 1506 aa9.57□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Mink1Q9JM52 1308 aa9.57□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Peg3Q3URU2 1571 aa9.57□□□□□ -0.88
Bdnf-201ENSMUST00000053317 4933416C03RikQ3V063 378 aa9.56□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Dip2cE9PWR4 1557 aa9.55□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Rundc1Q0VDN7 615 aa9.55□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Vps8Q0P5W1 1427 aa9.55□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Abca9Q8K449 1623 aa9.54□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Gm38655A0A286YDK6 273 aa9.54□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Nop58Q6DFW4 536 aaKnown RBP9.54□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Naip5Q9R016 1403 aa9.53□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Atf3Q60765 181 aa9.53□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Gtf2e1Q9D0D5 440 aa9.53□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Sin3aQ60520 1274 aaKnown RBP9.53□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Usp40Q8BWR4 1235 aa9.53□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Rapgef3Q8VCC8 918 aa9.52□□□□□ -0.88
Bdnf-201ENSMUST00000053317 Ubap1lG3UW59 384 aa9.52□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Puf60Q3UEB3 564 aaKnown RBP9.52□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Kdm3bQ6ZPY7 1562 aa9.51□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Ylpm1Q9R0I7 1386 aaKnown RBP9.51□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Hfm1D3Z4R1 1434 aa9.51□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Nos1Q9Z0J4 1429 aa9.51□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Hecw2Q6I6G8 1578 aa9.5□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Abcc3B2RX12 1523 aa9.5□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Srcin1Q9QWI6 1250 aa9.5□□□□□ -0.89
Bdnf-201ENSMUST00000053317 PtprmP28828 1452 aa9.5□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Kidins220E9Q9B7 1793 aa9.49□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Atp2b2Q9R0K7 1198 aa9.49□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Atp7aQ64430 1491 aa9.49□□□□□ -0.89
Bdnf-201ENSMUST00000053317 GnpatP98192 678 aa9.49□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Washc2Q6PGL7 1334 aa9.49□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Tmem94Q7TSH8 1360 aa9.49□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Kiaa1210E9Q0C6 1637 aa9.48□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Gm32742A0A1B0GT42 1604 aa9.47□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Csrnp3P59055 597 aa9.47□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Adgrl2Q8JZZ7 1487 aa9.47□□□□□ -0.89
Bdnf-201ENSMUST00000053317 SphkapQ6NSW3 1687 aa9.47□□□□□ -0.89
Bdnf-201ENSMUST00000053317 RereQ80TZ9 1558 aa9.47□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Ddx54Q8K4L0 874 aaKnown RBP9.46□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Ap3b2Q9JME5 1082 aa9.46□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Usp54Q8BL06 1588 aaKnown RBP9.46□□□□□ -0.89
Bdnf-201ENSMUST00000053317 Zranb1Q7M760 708 aa9.46□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Gimap5Q8BWF2 308 aa9.46□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Rfx7F8VPJ6 1459 aa9.46□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Cdc42bpbQ7TT50 1713 aa9.45□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Qser1A2BIE1 1698 aa9.45□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Gm10563F6WIE4 79 aa9.45□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Tom1O88746 492 aa9.45□□□□□ -0.9
Bdnf-201ENSMUST00000053317 4930567H17RikQ3V0K5 233 aa9.45□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Acsbg1Q99PU5 721 aa9.44□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Fmn2Q9JL04 1578 aa9.44□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Prrc2bQ7TPM1 1486 aaKnown RBP9.44□□□□□ -0.9
Bdnf-201ENSMUST00000053317 Trpm2Q91YD4 1506 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms