RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Vps8Q0P5W1 1427 aa17.51■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Ncoa2Q61026 1462 aa17.51■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 R3hcc1Q8BSI6 488 aa17.51■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Tsen2Q6P7W5 460 aa17.5■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Fam184bQ0KK56 942 aa17.5■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Ralbp1Q62172 648 aa17.5■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 WrnO09053 1401 aa17.5■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Inpp5dQ9ES52 1191 aa17.5■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Iffo2Q8R2V2 512 aa17.49■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Calcoco2A2A6M5 331 aa17.49■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 ChgaP26339 463 aaKnown RBP17.49■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Mre11Q61216 706 aa17.48■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Shroom4Q1W617 1475 aa17.48■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Iqgap2Q3UQ44 1575 aa17.48■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Tnnt2P50752 301 aa17.48■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Polr1aO35134 1717 aaKnown RBP17.48■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 MecomP14404 1042 aa17.48■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Txndc2Q6P902 515 aa17.47■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 GorabQ8BRM2 368 aa17.47■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Ddrgk1Q80WW9 315 aa17.46■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Cc2d2bA0A286YDU8 1405 aa17.46■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Rsph3aQ3UFY4 516 aa17.46■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 Top2aQ01320 1528 aaKnown RBP17.46■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 GsdmaQ9EST1 446 aa17.45■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Zscan10Q3URR7 782 aa17.45■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Kif7B7ZNG0 1348 aa17.44■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Anapc15P60007 132 aa17.44■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Nol10Q5RJG1 687 aaKnown RBP17.44■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Efcab5A0JP43 1406 aa17.44■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Clstn1Q9EPL2 979 aa17.44■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Cald1E9QA15 768 aaKnown RBP17.43■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 RdxP26043 583 aaKnown RBP17.43■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 CgnP59242 1191 aa17.43■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Usp40Q8BWR4 1235 aa17.43■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Utp14aQ640M1 767 aaKnown RBP17.41■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Tnnt1O88346 262 aa17.41■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Stk31Q99MW1 1018 aa17.41■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Ccdc60Q8C4J0 545 aa17.4■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Trim58Q5NCC9 485 aa17.4■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Ciz1Q8VEH2 845 aa17.4■□□□□ 0.38
Ccdc85a-201ENSMUST00000042534 Znf316Q6PGE4 1016 aa17.39■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Nsd2Q8BVE8 1365 aa17.39■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Cspp1B2RX88 1205 aa17.38■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Tpm3-rs7D3Z2H9 248 aa17.38■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 G3bp1P97855 465 aaKnown RBP17.38■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Kif16bB1AVY7 1312 aa17.37■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Glipr1l2Q9CQ35 332 aa17.37■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Cc2d2aQ8CFW7 1633 aa17.37■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Ccdc146E9Q9F7 977 aa17.37■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Tdrd9Q14BI7 1383 aa17.37■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 SlkO54988 1233 aa17.37■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Becn1O88597 448 aa17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 HdgfP51859 237 aaKnown RBP17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Rab11fip3Q8CHD8 1047 aa17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Brpf1B2RRD7 1212 aa17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Esx1O88933 382 aa17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Prkrip1Q9CWV6 186 aaKnown RBP17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Naip1Q9QWK5 1403 aa17.36■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Sox12Q04890 314 aa17.35■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Ecm2Q5FW85 670 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 ErbinQ80TH2 1402 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Gtf3c3Q3TMP1 882 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 NrkQ9R0G8 1455 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Ncapd3Q6ZQK0 1506 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Znf710Q3U288 666 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 St18Q80TY4 1045 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Dnai2A2AC93 623 aa17.34■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Jph4Q80WT0 628 aa17.33■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 Ift140E9PY46 1464 aa17.33■□□□□ 0.37
Ccdc85a-201ENSMUST00000042534 VgfQ0VGU4 617 aa17.33■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Atl3Q91YH5 541 aa17.33■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Map3k1P53349 1493 aa17.32■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Casq1O09165 405 aa17.32■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Pibf1E9Q6K3 756 aa17.32■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Ak7Q9D2H2 614 aa17.31■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Rpgrip1lQ8CG73 1264 aa17.31■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Ap3b2Q9JME5 1082 aa17.31■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Rabep1O35551 862 aa17.3■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Filip1lQ6P6L0 1131 aa17.3■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Ccdc30Q8BVF4 654 aa17.29■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Prdm16A2A935 1275 aa17.29■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Arhgef5E9Q7D5 1581 aa17.29■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Ush1cQ9ES64 910 aa17.28■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Plekhh1Q80TI1 1356 aa17.28■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 PnisrA2AJT4 805 aaKnown RBP17.28■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Shq1Q7TMX5 569 aa17.28■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Kiaa0754Q69ZZ9 979 aa17.28■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 Senp3Q9EP97 568 aaKnown RBP17.28■□□□□ 0.36
Ccdc85a-201ENSMUST00000042534 CrebrfQ8CDG5 640 aaKnown RBP17.26■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Sf3a1Q8K4Z5 791 aaKnown RBP17.26■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Soga1E1U8D0 1418 aa17.26■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Trim30aP15533 496 aa17.26■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Slc4a10Q5DTL9 1118 aa17.26■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Chmp3Q9CQ10 224 aa17.26■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Gprasp1Q5U4C1 1347 aa17.25■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Arap1Q4LDD4 1452 aa17.24■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 KinQ8K339 391 aa17.24■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Eif2s2Q99L45 331 aaKnown RBP17.24■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Ccer1Q9CQL2 403 aa17.24■□□□□ 0.35
Ccdc85a-201ENSMUST00000042534 Cetn4Q8K4K1 168 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms