RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Slc4a1apE9PX68 744 aa12.31□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Plin1Q8CGN5 517 aa12.31□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Naip2Q9QUK4 1447 aa12.31□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Prdm16A2A935 1275 aa12.3□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Sall3Q62255 1320 aa12.3□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Trappc8E9PWG2 1437 aa12.3□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Neurod2Q62414 383 aa12.3□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Irx6Q9ER75 438 aa12.3□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Igf1rQ60751 1373 aa12.3□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Cd109Q8R422 1442 aa12.29□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Abcc1O35379 1528 aa12.28□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Prex2Q3LAC4 1598 aa12.28□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Hsp90aa1P07901 733 aaKnown RBP12.27□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Dcaf11Q91VU6 549 aa12.27□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Rock2P70336 1388 aa12.27□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Usp40Q8BWR4 1235 aa12.27□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Q9D9H8 365 aa12.26□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Dapk1Q80YE7 1442 aa12.26□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Gapvd1Q6PAR5 1458 aa12.26□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Mink1Q9JM52 1308 aa12.26□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Senp3Q9EP97 568 aaKnown RBP12.25□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Il16O54824 1322 aa12.24□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Rusc2Q80U22 1514 aa12.24□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Smg6P61406 1418 aaKnown RBP12.24□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Inpp5dQ9ES52 1191 aa12.24□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Washc2Q6PGL7 1334 aa12.24□□□□□ -0.45
Rnf43-201ENSMUST00000040089 ErbinQ80TH2 1402 aa12.23□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Birc3O08863 600 aa12.23□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Pank3Q8R2W9 370 aa12.23□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Dbr1Q923B1 550 aa12.23□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Fancd2Q80V62 1450 aa12.22□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Pak3Q61036 559 aa12.22□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Rapgef6Q5NCJ1 1609 aa12.22□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Irx3P81067 507 aa12.22□□□□□ -0.45
Rnf43-201ENSMUST00000040089 Pip4k2bQ80XI4 416 aa12.21□□□□□ -0.46
Rnf43-201ENSMUST00000040089 B4galnt3Q6L8S8 986 aa12.2□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Arhgef40Q3UPH7 1517 aa12.2□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Ankrd36D3Z4K0 1415 aa12.2□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Nsd2Q8BVE8 1365 aa12.19□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Eif4g1Q6NZJ6 1600 aaKnown RBP12.19□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Tmf1B9EKI3 1091 aa12.19□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Gtf3c3Q3TMP1 882 aa12.19□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Puf60Q3UEB3 564 aaKnown RBP12.18□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Arhgef12Q8R4H2 1543 aaKnown RBP12.18□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Ipo9Q91YE6 1041 aa12.17□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Mlh3A0A1Y7VMP7 1443 aa12.17□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Eif4g3Q80XI3 1579 aaKnown RBP12.16□□□□□ -0.46
Rnf43-201ENSMUST00000040089 1700019A02RikA0A087WPV9 146 aa12.16□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Adamts12Q811B3 1600 aa12.15□□□□□ -0.46
Rnf43-201ENSMUST00000040089 Slc4a2P13808 1237 aaKnown RBP12.14□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Znf608Q56A10 1511 aa12.14□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Adgrb2Q8CGM1 1561 aa12.14□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Ttc21bQ0HA38 1315 aa12.14□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Tcerg1Q8CGF7 1100 aaKnown RBP12.13□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Kcnh8P59111 1102 aa12.13□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Mapkbp1Q6NS57 1503 aa12.13□□□□□ -0.47
Rnf43-201ENSMUST00000040089 U2af1Q9D883 239 aaKnown RBP12.12□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Erich3F6QRE9 1637 aa12.11□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Rsph4aQ8BYM7 716 aa12.11□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Atp2b2Q9R0K7 1198 aa12.11□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Lmo7E9PYF4 1699 aaKnown RBP12.11□□□□□ -0.47
Rnf43-201ENSMUST00000040089 OvosQ3UU35 1456 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Abca5Q8K448 1642 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 CanxP35564 591 aaKnown RBP12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Wdr7Q920I9 1489 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Zscan21Q07231 555 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Armcx1Q9CX83 456 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Myom3A2ABU4 1439 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Caskin1Q6P9K8 1431 aa12.1□□□□□ -0.47
Rnf43-201ENSMUST00000040089 CrbnQ8C7D2 445 aa12.09□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Fam184bQ0KK56 942 aa12.09□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Abca16E9PWJ7 1678 aa12.09□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Adcy10Q8C0T9 1614 aa12.09□□□□□ -0.47
Rnf43-201ENSMUST00000040089 Liat1Q810M6 228 aa12.08□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Mapk8ip3Q9ESN9 1337 aa12.08□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Gm6268A2A3U9 297 aa12.08□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Speer4f1Q9D5Q6 258 aa12.08□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Trim30dE9PWL0 497 aa12.07□□□□□ -0.48
Rnf43-201ENSMUST00000040089 CenpjQ569L8 1344 aa12.07□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Plcd4Q8K3R3 807 aa12.07□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Ssh2Q5SW75 1423 aa12.07□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Zscan10Q3URR7 782 aa12.06□□□□□ -0.48
Rnf43-201ENSMUST00000040089 ChgaP26339 463 aaKnown RBP12.06□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Kif7B7ZNG0 1348 aa12.06□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Abcc2Q8VI47 1543 aa12.06□□□□□ -0.48
Rnf43-201ENSMUST00000040089 HnrnpmQ9D0E1 729 aaKnown RBP12.06□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Esx1O88933 382 aa12.05□□□□□ -0.48
Rnf43-201ENSMUST00000040089 4930567H17RikQ3V0K5 233 aa12.05□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Zranb1Q7M760 708 aa12.05□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Kdm5bQ80Y84 1544 aa12.05□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Q7TT23 1179 aa12.05□□□□□ -0.48
Rnf43-201ENSMUST00000040089 PtprtQ99M80 1454 aa12.05□□□□□ -0.48
Rnf43-201ENSMUST00000040089 AI481877A2ALV5 1481 aa12.04□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Rpgrip1lQ8CG73 1264 aa12.04□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Cabp4Q8VHC5 271 aa12.04□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Lmtk2Q3TYD6 1471 aa12.03□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Pibf1E9Q6K3 756 aa12.03□□□□□ -0.48
Rnf43-201ENSMUST00000040089 U2surpQ6NV83 1029 aaKnown RBP12.02□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Ptch1Q61115 1434 aa12.02□□□□□ -0.48
Rnf43-201ENSMUST00000040089 Ap3b2Q9JME5 1082 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms