RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Filip1lQ6P6L0 1131 aa28.53■■■□□ 2.16
Sh3rf1-201ENSMUST00000034060 Taf3Q5HZG4 932 aa28.52■■■□□ 2.16
Sh3rf1-201ENSMUST00000034060 CrebrfQ8CDG5 640 aaKnown RBP28.52■■■□□ 2.16
Sh3rf1-201ENSMUST00000034060 Rock1P70335 1354 aa28.52■■■□□ 2.16
Sh3rf1-201ENSMUST00000034060 Ccer1Q9CQL2 403 aa28.51■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Nap1l3Q794H2 544 aa28.5■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Rabep1O35551 862 aa28.5■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Ccdc34Q3UI66 367 aa28.5■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Kif4P33174 1231 aa28.46■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Ccdc173A0JLY1 547 aa28.46■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Slc4a1apE9PX68 744 aa28.45■■■□□ 2.15
Sh3rf1-201ENSMUST00000034060 Brpf1B2RRD7 1212 aa28.45■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Ralbp1Q62172 648 aa28.45■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Ccdc47Q9D024 483 aaKnown RBP28.45■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Srek1Q8BZX4 494 aaKnown RBP28.43■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Gripap1Q8VD04 806 aa28.43■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Tpd52l1O54818 204 aa28.43■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 KinQ8K339 391 aa28.43■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Tpm1P58771 284 aa28.42■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Ak7Q9D2H2 614 aa28.42■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 CenpjQ569L8 1344 aa28.42■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Ccdc146E9Q9F7 977 aa28.42■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Tpm2P58774 284 aa28.42■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Birc3O08863 600 aa28.4■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Rpap1Q80TE0 1409 aa28.4■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Usp47Q8BY87 1376 aa28.4■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Atl3Q91YH5 541 aa28.39■■■□□ 2.14
Sh3rf1-201ENSMUST00000034060 Stk26Q99JT2 416 aa28.39■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Hmgn5Q9JL35 406 aa28.39■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Sh3bgrQ9WUZ7 214 aa28.39■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Prkrip1Q9CWV6 186 aaKnown RBP28.38■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Trim58Q5NCC9 485 aa28.38■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Pank3Q8R2W9 370 aa28.38■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 A0A1L1SQF0 893 aa28.37■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Ftsj3Q9DBE9 838 aaKnown RBP28.37■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Rrp9Q91WM3 475 aaKnown RBP28.36■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Ankrd36D3Z4K0 1415 aa28.36■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 EzrP26040 586 aaKnown RBP28.36■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Carmil1Q6EDY6 1374 aa28.36■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Tsen2Q6P7W5 460 aa28.35■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Utp3Q9JI13 469 aaKnown RBP28.35■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Plin1Q8CGN5 517 aa28.34■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Kif3aP28741 701 aa28.33■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Eif2s2Q99L45 331 aaKnown RBP28.33■■■□□ 2.13
Sh3rf1-201ENSMUST00000034060 Zrsr2Q62377 462 aaKnown RBP28.32■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Dusp9Q7TNL7 452 aa28.31■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Ccdc60Q8C4J0 545 aa28.31■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Pds5bQ4VA53 1446 aaKnown RBP28.3■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Ciz1Q8VEH2 845 aa28.3■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Ipo7Q9EPL8 1038 aaKnown RBP28.29■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Lemd3Q9WU40 921 aa28.29■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Gprasp1Q5U4C1 1347 aa28.29■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 G3bp1P97855 465 aaKnown RBP28.29■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Tnnt1O88346 262 aa28.28■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Tpm4Q6IRU2 248 aa28.27■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 PrkcshO08795 521 aa28.27■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Rsph4aQ8BYM7 716 aa28.27■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 GsdmaQ9EST1 446 aa28.27■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Rfx1P48377 963 aa28.26■■■□□ 2.12
Sh3rf1-201ENSMUST00000034060 Ccnb3Q810T2 1396 aa28.26■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Crybg2B7ZCC2 1516 aa28.26■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Evc2Q8K1G2 1220 aa28.24■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Rab11fip3Q8CHD8 1047 aa28.24■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Rapgef2Q8CHG7 1496 aa28.24■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Isy1Q69ZQ2 285 aaKnown RBP28.24■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Cetn4Q8K4K1 168 aa28.23■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Stk31Q99MW1 1018 aa28.23■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Anp32eP97822 260 aaKnown RBP28.22■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Fam184bQ0KK56 942 aa28.22■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Gabpb2P81069 414 aa28.21■■■□□ 2.11
Sh3rf1-201ENSMUST00000034060 Hook1Q8BIL5 728 aa28.19■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Tomm22Q9CPQ3 142 aa28.19■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Znhit6Q3UFB2 460 aaKnown RBP28.19■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Inpp5dQ9ES52 1191 aa28.19■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Cplx2P84086 134 aa28.19■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Chmp3Q9CQ10 224 aa28.18■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Kif7B7ZNG0 1348 aa28.18■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Dapk1Q80YE7 1442 aa28.17■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Plcd4Q8K3R3 807 aa28.17■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 NaspQ99MD9 773 aaKnown RBP28.17■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Ccdc183A2AJB1 534 aa28.17■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Cwc15Q9JHS9 229 aaKnown RBP28.17■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Slc4a10Q5DTL9 1118 aa28.16■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Gm21969J3QJZ1 289 aa28.16■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Rnf20Q5DTM8 973 aa28.16■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Psme1P97371 249 aa28.15■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Znf710Q3U288 666 aa28.15■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Phf14Q9D4H9 881 aa28.15■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Plekhh1Q80TI1 1356 aa28.14■■■□□ 2.1
Sh3rf1-201ENSMUST00000034060 Zscan10Q3URR7 782 aa28.14■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Bicd2Q921C5 820 aa28.13■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Smc3Q9CW03 1217 aaKnown RBP28.13■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Ddx11Q6AXC6 880 aa28.12■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Gtf2a1Q99PM3 378 aa28.11■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 CftrP26361 1476 aa28.11■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Fan1Q69ZT1 1020 aa28.11■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Dixdc1Q80Y83 711 aa28.1■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Drc7Q6V3W6 876 aa28.1■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Cchcr1Q8K2I2 770 aa28.1■■■□□ 2.09
Sh3rf1-201ENSMUST00000034060 Rec8Q8C5S7 591 aa28.1■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms