RNA–Protein interactions for RNA: ENSMUST00000028799.11

Knl1-201, Transcript of Kinetochore scaffold 1, mousemouse

TSL 1 (best) BASIC

Gene Knl1, Length 5,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1-201ENSMUST00000028799 Ppp1r18Q8BQ30 594 aa20.29■□□□□ 0.84
Knl1-201ENSMUST00000028799 Tiam1Q60610 1591 aa20.29■□□□□ 0.84
Knl1-201ENSMUST00000028799 Cgnl1Q6AW69 1298 aa20.28■□□□□ 0.84
Knl1-201ENSMUST00000028799 PnnO35691 725 aaKnown RBP20.28■□□□□ 0.84
Knl1-201ENSMUST00000028799 Ralbp1Q62172 648 aa20.28■□□□□ 0.84
Knl1-201ENSMUST00000028799 Zscan10Q3URR7 782 aa20.27■□□□□ 0.84
Knl1-201ENSMUST00000028799 Birc3O08863 600 aa20.27■□□□□ 0.83
Knl1-201ENSMUST00000028799 Grin2bQ01097 1482 aa20.27■□□□□ 0.83
Knl1-201ENSMUST00000028799 Nsd2Q8BVE8 1365 aa20.26■□□□□ 0.83
Knl1-201ENSMUST00000028799 Erich6bQ9D4S6 220 aa20.25■□□□□ 0.83
Knl1-201ENSMUST00000028799 Smarce1O54941 411 aaKnown RBP20.25■□□□□ 0.83
Knl1-201ENSMUST00000028799 Tdrd9Q14BI7 1383 aa20.25■□□□□ 0.83
Knl1-201ENSMUST00000028799 Psme1P97371 249 aa20.25■□□□□ 0.83
Knl1-201ENSMUST00000028799 Mre11Q61216 706 aa20.25■□□□□ 0.83
Knl1-201ENSMUST00000028799 Znf710Q3U288 666 aa20.25■□□□□ 0.83
Knl1-201ENSMUST00000028799 Tsen2Q6P7W5 460 aa20.24■□□□□ 0.83
Knl1-201ENSMUST00000028799 Kif7B7ZNG0 1348 aa20.24■□□□□ 0.83
Knl1-201ENSMUST00000028799 Mroh2bQ7M6Y6 1581 aa20.24■□□□□ 0.83
Knl1-201ENSMUST00000028799 Q3TQI7 289 aaKnown RBP20.23■□□□□ 0.83
Knl1-201ENSMUST00000028799 Gm973E9Q295 1059 aa20.23■□□□□ 0.83
Knl1-201ENSMUST00000028799 Znf330Q922H9 316 aa20.22■□□□□ 0.83
Knl1-201ENSMUST00000028799 Duox2A2AQ99 1517 aa20.22■□□□□ 0.83
Knl1-201ENSMUST00000028799 Usp40Q8BWR4 1235 aa20.22■□□□□ 0.83
Knl1-201ENSMUST00000028799 ChgaP26339 463 aaKnown RBP20.22■□□□□ 0.83
Knl1-201ENSMUST00000028799 GsdmaQ9EST1 446 aa20.22■□□□□ 0.83
Knl1-201ENSMUST00000028799 Jph4Q80WT0 628 aa20.21■□□□□ 0.83
Knl1-201ENSMUST00000028799 Sh3bp5Q9Z131 463 aa20.2■□□□□ 0.82
Knl1-201ENSMUST00000028799 Atp6v1dP57746 247 aa20.19■□□□□ 0.82
Knl1-201ENSMUST00000028799 ErbinQ80TH2 1402 aa20.17■□□□□ 0.82
Knl1-201ENSMUST00000028799 Prkrip1Q9CWV6 186 aaKnown RBP20.17■□□□□ 0.82
Knl1-201ENSMUST00000028799 MyclP10166 368 aa20.17■□□□□ 0.82
Knl1-201ENSMUST00000028799 Rrp12Q6P5B0 1295 aaKnown RBP20.17■□□□□ 0.82
Knl1-201ENSMUST00000028799 Rad54l2Q99NG0 1466 aa20.17■□□□□ 0.82
Knl1-201ENSMUST00000028799 Ciz1Q8VEH2 845 aa20.17■□□□□ 0.82
Knl1-201ENSMUST00000028799 PnisrA2AJT4 805 aaKnown RBP20.16■□□□□ 0.82
Knl1-201ENSMUST00000028799 Prdm16A2A935 1275 aa20.16■□□□□ 0.82
Knl1-201ENSMUST00000028799 Txndc2Q6P902 515 aa20.16■□□□□ 0.82
Knl1-201ENSMUST00000028799 Trim58Q5NCC9 485 aa20.15■□□□□ 0.82
Knl1-201ENSMUST00000028799 Rsph3aQ3UFY4 516 aa20.15■□□□□ 0.82
Knl1-201ENSMUST00000028799 Plin1Q8CGN5 517 aa20.15■□□□□ 0.82
Knl1-201ENSMUST00000028799 AqrQ8CFQ3 1481 aaKnown RBP20.15■□□□□ 0.82
Knl1-201ENSMUST00000028799 PogzQ8BZH4 1409 aaKnown RBP20.14■□□□□ 0.81
Knl1-201ENSMUST00000028799 Gm7298A0A0N4SVU1 1476 aa20.14■□□□□ 0.81
Knl1-201ENSMUST00000028799 Eif4g2Q62448 906 aaKnown RBP20.13■□□□□ 0.81
Knl1-201ENSMUST00000028799 Kif16bB1AVY7 1312 aa20.12■□□□□ 0.81
Knl1-201ENSMUST00000028799 Esx1O88933 382 aa20.12■□□□□ 0.81
Knl1-201ENSMUST00000028799 Utp14aQ640M1 767 aaKnown RBP20.12■□□□□ 0.81
Knl1-201ENSMUST00000028799 Rpgrip1lQ8CG73 1264 aa20.12■□□□□ 0.81
Knl1-201ENSMUST00000028799 Soga1E1U8D0 1418 aa20.12■□□□□ 0.81
Knl1-201ENSMUST00000028799 Pcmtd1P59913 357 aa20.12■□□□□ 0.81
Knl1-201ENSMUST00000028799 R3hcc1Q8BSI6 488 aa20.11■□□□□ 0.81
Knl1-201ENSMUST00000028799 GorabQ8BRM2 368 aa20.11■□□□□ 0.81
Knl1-201ENSMUST00000028799 Ccdc60Q8C4J0 545 aa20.11■□□□□ 0.81
Knl1-201ENSMUST00000028799 Rtn4Q99P72 1162 aaKnown RBP20.1■□□□□ 0.81
Knl1-201ENSMUST00000028799 Ddrgk1Q80WW9 315 aa20.1■□□□□ 0.81
Knl1-201ENSMUST00000028799 Rassf8Q8CJ96 419 aa20.1■□□□□ 0.81
Knl1-201ENSMUST00000028799 Stk31Q99MW1 1018 aa20.1■□□□□ 0.81
Knl1-201ENSMUST00000028799 Plekhh1Q80TI1 1356 aa20.1■□□□□ 0.81
Knl1-201ENSMUST00000028799 Myom3A2ABU4 1439 aa20.1■□□□□ 0.81
Knl1-201ENSMUST00000028799 G3bp1P97855 465 aaKnown RBP20.09■□□□□ 0.81
Knl1-201ENSMUST00000028799 Plekhg5Q66T02 1073 aa20.08■□□□□ 0.81
Knl1-201ENSMUST00000028799 Il16O54824 1322 aa20.08■□□□□ 0.8
Knl1-201ENSMUST00000028799 MsnP26041 577 aaKnown RBP20.07■□□□□ 0.8
Knl1-201ENSMUST00000028799 Rab11fip3Q8CHD8 1047 aa20.07■□□□□ 0.8
Knl1-201ENSMUST00000028799 Atl3Q91YH5 541 aa20.07■□□□□ 0.8
Knl1-201ENSMUST00000028799 MecomP14404 1042 aa20.06■□□□□ 0.8
Knl1-201ENSMUST00000028799 Iffo2Q8R2V2 512 aa20.06■□□□□ 0.8
Knl1-201ENSMUST00000028799 Ccdc30Q8BVF4 654 aa20.06■□□□□ 0.8
Knl1-201ENSMUST00000028799 Cald1E9QA15 768 aaKnown RBP20.05■□□□□ 0.8
Knl1-201ENSMUST00000028799 Slc4a2P13808 1237 aaKnown RBP20.04■□□□□ 0.8
Knl1-201ENSMUST00000028799 Znf316Q6PGE4 1016 aa20.04■□□□□ 0.8
Knl1-201ENSMUST00000028799 PtprkP35822 1457 aa20.04■□□□□ 0.8
Knl1-201ENSMUST00000028799 Frmpd1A2AKB4 1549 aa20.04■□□□□ 0.8
Knl1-201ENSMUST00000028799 Cd109Q8R422 1442 aa20.04■□□□□ 0.8
Knl1-201ENSMUST00000028799 Ak7Q9D2H2 614 aa20.04■□□□□ 0.8
Knl1-201ENSMUST00000028799 Zfp644E9QA22 1323 aa20.03■□□□□ 0.8
Knl1-201ENSMUST00000028799 Gtf3c3Q3TMP1 882 aa20.03■□□□□ 0.8
Knl1-201ENSMUST00000028799 Pde4cQ3UEI1 686 aa20.03■□□□□ 0.8
Knl1-201ENSMUST00000028799 Tnnt1O88346 262 aa20.02■□□□□ 0.8
Knl1-201ENSMUST00000028799 Glipr1l2Q9CQ35 332 aa20.02■□□□□ 0.8
Knl1-201ENSMUST00000028799 Ccdc146E9Q9F7 977 aa20.02■□□□□ 0.8
Knl1-201ENSMUST00000028799 Rabep1O35551 862 aa20.02■□□□□ 0.8
Knl1-201ENSMUST00000028799 Urb2E9Q7L1 1524 aaKnown RBP20.02■□□□□ 0.8
Knl1-201ENSMUST00000028799 Camsap1A2AHC3 1581 aa20.02■□□□□ 0.79
Knl1-201ENSMUST00000028799 Arhgap31A6X8Z5 1425 aa20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 Tnnt2P50752 301 aa20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 Arhgap5P97393 1501 aa20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 Shq1Q7TMX5 569 aa20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 Calcoco2A2A6M5 331 aa20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 RdxP26043 583 aaKnown RBP20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 Nol10Q5RJG1 687 aaKnown RBP20.01■□□□□ 0.79
Knl1-201ENSMUST00000028799 Rab3gap2Q8BMG7 1366 aa20■□□□□ 0.79
Knl1-201ENSMUST00000028799 Washc2Q6PGL7 1334 aa19.99■□□□□ 0.79
Knl1-201ENSMUST00000028799 CgnP59242 1191 aa19.99■□□□□ 0.79
Knl1-201ENSMUST00000028799 Naip2Q9QUK4 1447 aa19.99■□□□□ 0.79
Knl1-201ENSMUST00000028799 Casq1O09165 405 aa19.98■□□□□ 0.79
Knl1-201ENSMUST00000028799 Sox12Q04890 314 aa19.98■□□□□ 0.79
Knl1-201ENSMUST00000028799 EprsQ8CGC7 1512 aaKnown RBP19.98■□□□□ 0.79
Knl1-201ENSMUST00000028799 Cspp1B2RX88 1205 aa19.98■□□□□ 0.79
Knl1-201ENSMUST00000028799 SlkO54988 1233 aa19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms