RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 RSC1P53236 928 aa0□□□□□ -2.41
snR52snR52 ACT1P60010 375 aaKnown RBP0□□□□□ -2.41
snR52snR52 NOP6Q07623 225 aaKnown RBP0□□□□□ -2.41
snR52snR52 AEP3Q12089 606 aa0□□□□□ -2.41
snR52snR52 TY3A-GQ12173 290 aa0□□□□□ -2.41
snR52snR52 IES3Q12345 250 aa0□□□□□ -2.41
snR52snR52 TY3A-IQ99219 290 aa0□□□□□ -2.41
snR52snR52 ISN1Q99312 450 aa0□□□□□ -2.41
snR52snR52 RPS14AP06367 137 aaKnown RBP-0.01□□□□□ -2.41
snR52snR52 CAB3P36076 571 aa-0.01□□□□□ -2.41
snR52snR52 ASC1P38011 319 aaKnown RBP-0.01□□□□□ -2.41
snR52snR52 OLA1P38219 394 aaKnown RBP-0.01□□□□□ -2.41
snR52snR52 RPS14BP39516 138 aaKnown RBP-0.01□□□□□ -2.41
snR52snR52 MOB2P43563 287 aa-0.01□□□□□ -2.41
snR52snR52 YJR146WP47174 117 aa-0.01□□□□□ -2.41
snR52snR52 SDS23P53172 527 aa-0.01□□□□□ -2.41
snR52snR52 SSU72P53538 206 aaPredicted RBP-0.01□□□□□ -2.41
snR52snR52 TIM10P87108 93 aa-0.01□□□□□ -2.41
snR52snR52 INP1Q03694 420 aa-0.01□□□□□ -2.41
snR52snR52 YMR166CQ03829 368 aa-0.01□□□□□ -2.41
snR52snR52 ARX1Q03862 593 aaKnown RBP-0.01□□□□□ -2.41
snR52snR52 ALE1Q08548 619 aa-0.01□□□□□ -2.41
snR52snR52 YOL159C-AQ3E769 90 aa-0.01□□□□□ -2.41
snR52snR52 VPS63O13549 108 aa-0.02□□□□□ -2.41
snR52snR52 CDC21P06785 304 aa-0.02□□□□□ -2.41
snR52snR52 YER188C-AP0C0V2 99 aa-0.02□□□□□ -2.41
snR52snR52 ARF1P11076 181 aaKnown RBP-0.02□□□□□ -2.41
snR52snR52 HSP104P31539 908 aaKnown RBP-0.02□□□□□ -2.41
snR52snR52 GRE3P38715 327 aaKnown RBP RIP-Chip data-0.02□□□□□ -2.41not detected
snR52snR52 YIL054WP40524 105 aa-0.02□□□□□ -2.41
snR52snR52 YFR018CP43599 363 aa-0.02□□□□□ -2.41
snR52snR52 RPT4P53549 437 aaKnown RBP-0.02□□□□□ -2.41
snR52snR52 AQR1P53943 586 aa-0.02□□□□□ -2.41
snR52snR52 YNL040WP53960 456 aaPredicted RBP-0.02□□□□□ -2.41
snR52snR52 ACL4Q03771 387 aa-0.02□□□□□ -2.41
snR52snR52 YMR130WQ04223 302 aa-0.02□□□□□ -2.41
snR52snR52 URC2Q04411 772 aa-0.02□□□□□ -2.41
snR52snR52 MED2Q12124 431 aa-0.02□□□□□ -2.41
snR52snR52 MTR10Q99189 972 aa-0.02□□□□□ -2.41
snR52snR52 YOL163WP0CF20 169 aa-0.03□□□□□ -2.41
snR52snR52 SRV2P17555 526 aaKnown RBP-0.03□□□□□ -2.41
snR52snR52 TRM7P38238 310 aaKnown RBP-0.03□□□□□ -2.41
snR52snR52 YDR341CQ05506 607 aaKnown RBP-0.03□□□□□ -2.41
snR52snR52 NSE1Q07913 336 aa-0.03□□□□□ -2.41
snR52snR52 OPI3P05375 206 aa-0.04□□□□□ -2.42
snR52snR52 RNA1P11745 407 aaKnown RBP-0.04□□□□□ -2.42
snR52snR52 RRP7P25368 297 aaPredicted RBP-0.04□□□□□ -2.42
snR52snR52 ITR2P30606 609 aa-0.04□□□□□ -2.42
snR52snR52 DOA1P36037 715 aa-0.04□□□□□ -2.42
snR52snR52 NAB3P38996 802 aaKnown RBP RIP-Chip data-0.04□□□□□ -2.42not detected
snR52snR52 DON1Q05610 365 aa-0.04□□□□□ -2.42
snR52snR52 DAP2P18962 818 aa-0.05□□□□□ -2.42
snR52snR52 CDC42P19073 191 aa-0.05□□□□□ -2.42
snR52snR52 PRE7P23724 241 aaKnown RBP-0.05□□□□□ -2.42
snR52snR52 SAS3P34218 831 aa-0.05□□□□□ -2.42
snR52snR52 YER135CP40082 130 aa-0.05□□□□□ -2.42
snR52snR52 SLM1P40485 686 aa-0.05□□□□□ -2.42
snR52snR52 UFD1P53044 361 aa-0.05□□□□□ -2.42
snR52snR52 YGL118CP53132 145 aa-0.05□□□□□ -2.42
snR52snR52 BNI5P53890 448 aaKnown RBP-0.05□□□□□ -2.42
snR52snR52 TRM82Q03774 444 aa-0.05□□□□□ -2.42
snR52snR52 RTC5Q12108 567 aaKnown RBP-0.05□□□□□ -2.42
snR52snR52 TIM22Q12328 207 aa-0.05□□□□□ -2.42
snR52snR52 SLM5P25345 492 aaKnown RBP-0.06□□□□□ -2.42
snR52snR52 IMP2'P32351 346 aa-0.06□□□□□ -2.42
snR52snR52 CSE1P33307 960 aa-0.06□□□□□ -2.42
snR52snR52 RFT1P38206 574 aaPredicted RBP-0.06□□□□□ -2.42
snR52snR52 DSE2P38844 325 aa-0.06□□□□□ -2.42
snR52snR52 ARF3P40994 183 aaRIP-Chip data-0.06□□□□□ -2.42not detected
snR52snR52 PIR5P46999 287 aa-0.06□□□□□ -2.42
snR52snR52 LSG1P53145 640 aaKnown RBP-0.06□□□□□ -2.42
snR52snR52 YLH47Q06493 454 aa-0.06□□□□□ -2.42
snR52snR52 RDS3Q06835 107 aaPredicted RBP-0.06□□□□□ -2.42
snR52snR52 YPL150WQ12152 901 aa-0.06□□□□□ -2.42
snR52snR52 TRM10Q12400 293 aa-0.06□□□□□ -2.42
snR52snR52 ZWF1P11412 505 aaKnown RBP-0.07□□□□□ -2.42
snR52snR52 URA10P30402 227 aa-0.07□□□□□ -2.42
snR52snR52 AYR1P40471 297 aa-0.07□□□□□ -2.42
snR52snR52 COS6P53344 381 aa-0.07□□□□□ -2.42
snR52snR52 EMC6Q12431 108 aa-0.07□□□□□ -2.42
snR52snR52 MET17P06106 444 aa-0.08□□□□□ -2.42
snR52snR52 HIS3P06633 220 aa-0.08□□□□□ -2.42
snR52snR52 YKL187CP34231 750 aa-0.08□□□□□ -2.42
snR52snR52 QDR3P38227 689 aa-0.08□□□□□ -2.42
snR52snR52 YHL044WP38727 235 aa-0.08□□□□□ -2.42
snR52snR52 MND1P53102 219 aa-0.08□□□□□ -2.42
snR52snR52 FMP48P53233 369 aa-0.08□□□□□ -2.42
snR52snR52 SUE1Q06524 206 aa-0.08□□□□□ -2.42
snR52snR52 DCP1Q12517 231 aaPredicted RBP-0.08□□□□□ -2.42
snR52snR52 DPM1P14020 267 aaKnown RBP-0.09□□□□□ -2.42
snR52snR52 CKA1P15790 372 aa-0.09□□□□□ -2.42
snR52snR52 MRPL8P22353 238 aa-0.09□□□□□ -2.42
snR52snR52 CLB3P24870 427 aa-0.09□□□□□ -2.42
snR52snR52 YKL071WP36086 256 aa-0.09□□□□□ -2.42
snR52snR52 SMF2P38778 549 aa-0.09□□□□□ -2.42
snR52snR52 IRC6P43615 237 aa-0.09□□□□□ -2.42
snR52snR52 ERO1Q03103 563 aa-0.09□□□□□ -2.42
snR52snR52 MZM1Q03429 123 aaPredicted RBP-0.09□□□□□ -2.42
snR52snR52 PGA3Q12746 312 aaKnown RBP-0.09□□□□□ -2.42
snR52snR52 BOL1Q3E793 110 aa-0.09□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 104.4 ms