RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MRPL35Q06678 367 aa5.61□□□□□ -1.51
VPS4YPR173C AEP3Q12089 606 aa5.61□□□□□ -1.51
VPS4YPR173C YOL114CQ12322 202 aa5.61□□□□□ -1.51
VPS4YPR173C SNU23Q12368 194 aaPredicted RBP5.61□□□□□ -1.51
VPS4YPR173C APC2Q12440 853 aa5.61□□□□□ -1.51
VPS4YPR173C YOR338WQ99326 363 aa5.61□□□□□ -1.51
VPS4YPR173C PGS1P25578 521 aa5.6□□□□□ -1.51
VPS4YPR173C ACB1P31787 87 aa5.6□□□□□ -1.51
VPS4YPR173C HXT4P32467 576 aa5.6□□□□□ -1.51
VPS4YPR173C SSO1P32867 290 aa5.6□□□□□ -1.51
VPS4YPR173C TMA19P35691 167 aaKnown RBP5.6□□□□□ -1.51
VPS4YPR173C YKL151CP36059 337 aa5.6□□□□□ -1.51
VPS4YPR173C SHE2P36068 246 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
VPS4YPR173C SOL2P37262 315 aa5.6□□□□□ -1.51
VPS4YPR173C YRO2P38079 344 aa5.6□□□□□ -1.51
VPS4YPR173C GEP4P38812 185 aa5.6□□□□□ -1.51
VPS4YPR173C YHR177WP38867 453 aa5.6□□□□□ -1.51
VPS4YPR173C YER184CP39961 794 aa5.6□□□□□ -1.51
VPS4YPR173C SNM1P40993 198 aa5.6□□□□□ -1.51
VPS4YPR173C PAC10P48363 199 aa5.6□□□□□ -1.51
VPS4YPR173C JAC1P53193 184 aa5.6□□□□□ -1.51
VPS4YPR173C TNA1P53322 534 aa5.6□□□□□ -1.51
VPS4YPR173C FRE4P53746 719 aa5.6□□□□□ -1.51
VPS4YPR173C CAF40P53829 373 aa5.6□□□□□ -1.51
VPS4YPR173C TPS1Q00764 495 aaKnown RBP5.6□□□□□ -1.51
VPS4YPR173C CCE1Q03702 353 aa5.6□□□□□ -1.51
VPS4YPR173C GAD1Q04792 585 aa5.6□□□□□ -1.51
VPS4YPR173C CIA1Q05583 330 aa5.6□□□□□ -1.51
VPS4YPR173C YLR036CQ07986 203 aa5.6□□□□□ -1.51
VPS4YPR173C PLB3Q08108 686 aa5.6□□□□□ -1.51
VPS4YPR173C YLR046CQ12253 270 aa5.6□□□□□ -1.51
VPS4YPR173C RGT2Q12300 763 aa5.6□□□□□ -1.51
VPS4YPR173C NDJ1Q12366 352 aa5.6□□□□□ -1.51
VPS4YPR173C REP2P03872 296 aa5.59□□□□□ -1.51
VPS4YPR173C ERD2P18414 219 aa5.59□□□□□ -1.51
VPS4YPR173C HOP1P20050 605 aa5.59□□□□□ -1.51
VPS4YPR173C UTR1P21373 530 aa5.59□□□□□ -1.51
VPS4YPR173C KIN3P22209 435 aa5.59□□□□□ -1.51
VPS4YPR173C TRX3P25372 127 aa5.59□□□□□ -1.51
VPS4YPR173C WBP1P33767 430 aaKnown RBP5.59□□□□□ -1.51
VPS4YPR173C EMC3P36039 253 aa5.59□□□□□ -1.51
VPS4YPR173C SCO2P38072 301 aa5.59□□□□□ -1.51
VPS4YPR173C SHE1P38200 338 aa5.59□□□□□ -1.51
VPS4YPR173C STP2P38704 541 aa5.59□□□□□ -1.51
VPS4YPR173C GIC1P38785 314 aa5.59□□□□□ -1.51
VPS4YPR173C PCL5P38794 229 aa5.59□□□□□ -1.51
VPS4YPR173C YMR144WP40214 342 aaKnown RBP5.59□□□□□ -1.51
VPS4YPR173C YIR016WP40572 265 aa5.59□□□□□ -1.51
VPS4YPR173C BAP3P41815 604 aa5.59□□□□□ -1.51
VPS4YPR173C OYE3P41816 400 aaPredicted RBP5.59□□□□□ -1.51
VPS4YPR173C PSA1P41940 361 aaKnown RBP5.59□□□□□ -1.51
VPS4YPR173C VPS73P53142 486 aaKnown RBP5.59□□□□□ -1.51
VPS4YPR173C COS1P53822 381 aa5.59□□□□□ -1.51
VPS4YPR173C YNL034WP53963 612 aa5.59□□□□□ -1.51
VPS4YPR173C AAT1Q01802 451 aa5.59□□□□□ -1.51
VPS4YPR173C TIM44Q01852 431 aa5.59□□□□□ -1.51
VPS4YPR173C SWF1Q04629 336 aa5.59□□□□□ -1.51
VPS4YPR173C RTN1Q04947 295 aaKnown RBP5.59□□□□□ -1.51
VPS4YPR173C IPK1Q06667 281 aa5.59□□□□□ -1.51
VPS4YPR173C ICL2Q12031 575 aa5.59□□□□□ -1.51
VPS4YPR173C BSC1Q12140 328 aa5.59□□□□□ -1.51
VPS4YPR173C PCL9Q12477 304 aa5.59□□□□□ -1.51
VPS4YPR173C PSF1Q12488 208 aa5.59□□□□□ -1.51
VPS4YPR173C RRP12Q12754 1228 aaKnown RBP5.59□□□□□ -1.51
VPS4YPR173C YGL194C-AQ2V2P6 80 aa5.59□□□□□ -1.51
VPS4YPR173C SLH1P53327 1967 aaKnown RBP5.58□□□□□ -1.52
VPS4YPR173C QCR7P00128 127 aa5.58□□□□□ -1.52
VPS4YPR173C RPL11AP0C0W9 174 aaKnown RBP5.58□□□□□ -1.52
VPS4YPR173C STE12P13574 688 aa5.58□□□□□ -1.52
VPS4YPR173C SNF6P18888 332 aa5.58□□□□□ -1.52
VPS4YPR173C CKS1P20486 150 aaKnown RBP5.58□□□□□ -1.52
VPS4YPR173C RNA14P25298 677 aaKnown RBP5.58□□□□□ -1.52
VPS4YPR173C HCM1P25364 564 aa5.58□□□□□ -1.52
VPS4YPR173C GEX1P25596 615 aa5.58□□□□□ -1.52
VPS4YPR173C GEX2P36173 615 aa5.58□□□□□ -1.52
VPS4YPR173C DBP8P38719 431 aa5.58□□□□□ -1.52
VPS4YPR173C MSS4P38994 779 aa5.58□□□□□ -1.52
VPS4YPR173C NAB3P38996 802 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52 RIP-Chip
VPS4YPR173C YEL073CP39974 107 aa5.58□□□□□ -1.52
VPS4YPR173C FMP52P40008 231 aa5.58□□□□□ -1.52
VPS4YPR173C GID8P40208 455 aa5.58□□□□□ -1.52
VPS4YPR173C RFC4P40339 323 aaKnown RBP5.58□□□□□ -1.52
VPS4YPR173C LSB3P43603 459 aaKnown RBP5.58□□□□□ -1.52
VPS4YPR173C RPE1P46969 238 aa5.58□□□□□ -1.52
VPS4YPR173C COS10P52924 374 aa5.58□□□□□ -1.52
VPS4YPR173C GPG1P53130 126 aa5.58□□□□□ -1.52
VPS4YPR173C VOA1P53262 265 aa5.58□□□□□ -1.52
VPS4YPR173C ELP6Q04868 273 aa5.58□□□□□ -1.52
VPS4YPR173C YOR387CQ08910 206 aa5.58□□□□□ -1.52
VPS4YPR173C RKM5Q12367 367 aa5.58□□□□□ -1.52
VPS4YPR173C RPL11BQ3E757 174 aaPredicted RBP5.58□□□□□ -1.52
VPS4YPR173C CAR2P07991 424 aaKnown RBP5.57□□□□□ -1.52
VPS4YPR173C TY2A-LR1P0C2J4 438 aa5.57□□□□□ -1.52
VPS4YPR173C RPS18AP0CX55 146 aaKnown RBP5.57□□□□□ -1.52
VPS4YPR173C RPS18BP0CX56 146 aaPredicted RBP5.57□□□□□ -1.52
VPS4YPR173C TY2A-FP0CX61 438 aa5.57□□□□□ -1.52
VPS4YPR173C TY2A-GR2P0CX62 438 aa5.57□□□□□ -1.52
VPS4YPR173C FUS3P16892 353 aaKnown RBP5.57□□□□□ -1.52
VPS4YPR173C SNF5P18480 905 aa5.57□□□□□ -1.52
VPS4YPR173C MAG1P22134 296 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms