RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	YNK1	P36010	153 aa	Known RBP	4.22	□□□□□ -1.73
GDE1	YPL110C	ADH5	P38113	351 aa	Known RBP	4.22	□□□□□ -1.73
GDE1	YPL110C	BIG1	P38813	335 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	YAR1	P46683	200 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	ALY2	P47029	1046 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	AVT4	P50944	713 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	TAD1	P53065	400 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	YPR003C	P53394	754 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	CUS2	P53830	285 aa	Predicted RBP	4.22	□□□□□ -1.73
GDE1	YPL110C	ECM22	Q05958	814 aa	Predicted RBP	4.22	□□□□□ -1.73
GDE1	YPL110C	ATG39	Q06159	398 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	ATG33	Q06485	197 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	YET3	Q07451	203 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	PKH2	Q12236	1081 aa	Known RBP	4.22	□□□□□ -1.73
GDE1	YPL110C	RTN2	Q12443	393 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	YOL159C-A	Q3E769	90 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	RIB3	Q99258	208 aa		4.22	□□□□□ -1.73
GDE1	YPL110C	RPL9A	P05738	191 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	CDC7	P06243	507 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	TPK1	P06244	397 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	RPS19A	P07280	144 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	RPS19B	P07281	144 aa	Predicted RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	ATP5	P09457	212 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	NHP6B	P11633	99 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	CBS2	P14905	389 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	RPS1B	P23248	255 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	VMA3	P25515	160 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	UPS2	P35200	230 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	YKL162C	P36052	402 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	PDX3	P38075	228 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	ZTA1	P38230	334 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	YBR053C	P38235	358 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	EXO5	P38289	585 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	ASN2	P49090	572 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	RPL9B	P51401	191 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	COG7	P53195	279 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	PEX30	Q06169	523 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	MRI1	Q06489	411 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	NMD4	Q12129	218 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	LEU2	P04173	364 aa	Predicted RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	SEC53	P07283	254 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	TRS65	P32893	560 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	YPC1	P38298	316 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	VPS52	P39904	641 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	FMC1	P40491	155 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	TIR3	P40552	269 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	SSY5	P47002	699 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	SNN1	P48232	102 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	RPL22B	P56628	122 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
GDE1	YPL110C	YMR210W	Q03649	449 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	CSM3	Q04659	317 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	YMR226C	Q05016	267 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	YLR407W	Q06070	228 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	SRL2	Q12020	392 aa		4.21	□□□□□ -1.74
GDE1	YPL110C	MEX67	Q99257	599 aa	Known RBP	4.21	□□□□□ -1.74
GDE1	YPL110C	RNP1	P32385	249 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	UTR4	P32626	227 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	PET10	P36139	283 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	DTR1	P38125	572 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YJR149W	P47177	404 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	COS10	P52924	374 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	INN1	P53901	409 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	SHH3	Q04487	196 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YDR222W	Q04925	415 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	HOF1	Q05080	669 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	TY1A-DR3	Q12441	440 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	PTC5	Q12511	572 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YPR014C	Q6B0W2	109 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	HIS5	P07172	385 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	NUP1	P20676	1076 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	CYS4	P32582	507 aa	Known RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	COS9	P36034	407 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	MMS21	P38632	267 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	NSG1	P38837	291 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	VFA1	P40080	203 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YIL067C	P40514	678 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	SMK1	P41808	388 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	OYE3	P41816	400 aa	Predicted RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	AZR1	P50080	613 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	ODC1	Q03028	310 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YDR391C	Q04170	232 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	DAP1	Q12091	152 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	BI2	P03873	423 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	CAP2	P13517	287 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	ZRC1	P20107	442 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	VAC17	P25591	423 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	DER1	P38307	211 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	YHK8	P38776	514 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	PRM2	P40534	656 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	ALK1	P43633	760 aa	Known RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	HIT1	P46973	164 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	MRX5	P47007	382 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	GPI14	P47088	403 aa	Known RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	AAD10	P47182	288 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	STR3	P53101	465 aa	Known RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	YGL039W	P53183	348 aa	Known RBP	4.2	□□□□□ -1.74
GDE1	YPL110C	YGR151C	P53287	111 aa		4.2	□□□□□ -1.74
GDE1	YPL110C	NOP19	P53317	196 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms