RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	LDH1	P38139	375 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	COX15	P40086	486 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	GPP2	P40106	250 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	LAS21	P40367	830 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	HIS6	P40545	261 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	SSU1	P41930	458 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	PFA3	P42836	336 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	MSB3	P48566	633 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	TRM9	P49957	279 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	PHB2	P50085	310 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	NOP19	P53317	196 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	PDR16	P53860	351 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	ALG11	P53954	548 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	SNP1	Q00916	300 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	YPL071C	Q02864	156 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	ODC1	Q03028	310 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	GIS4	Q04233	774 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	GMC1	Q04399	608 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	CSM3	Q04659	317 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	MFB1	Q04922	465 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	MRI1	Q06489	411 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	ECM30	Q06673	1274 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	ASR1	Q06834	288 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	PRP11	Q07350	266 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	GPM2	Q12008	311 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	YRA1	Q12159	226 aa	Known RBP	4.21	□□□□□ -1.74
TRM44	YPL030W	YLR108C	Q12259	485 aa		4.21	□□□□□ -1.74
TRM44	YPL030W	GCR1	P07261	785 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	HTS1	P07263	546 aa	Known RBP	4.2	□□□□□ -1.74
TRM44	YPL030W	ERD2	P18414	219 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	NPR1	P22211	790 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	URK1	P27515	501 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	COQ3	P27680	312 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	PPA2	P28239	310 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	ERG9	P29704	444 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	CYS4	P32582	507 aa	Known RBP	4.2	□□□□□ -1.74
TRM44	YPL030W	UTR2	P32623	467 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	YKL075C	P36083	450 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	MRPL24	P36525	258 aa	Predicted RBP	4.2	□□□□□ -1.74
TRM44	YPL030W	MBA1	P38300	278 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	WSC4	P38739	605 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	YHK8	P38776	514 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	RRP4	P38792	359 aa	Known RBP	4.2	□□□□□ -1.74
TRM44	YPL030W	PFS1	P38872	237 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	YMR144W	P40214	342 aa	Known RBP	4.2	□□□□□ -1.74
TRM44	YPL030W	LSB3	P43603	459 aa	Known RBP	4.2	□□□□□ -1.74
TRM44	YPL030W	YGR066C	P53242	292 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	YPR003C	P53394	754 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
TRM44	YPL030W	YDR366C	P87287	132 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	CDC55	Q00362	526 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	ATG21	Q02887	496 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	UME1	Q03010	460 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	YET2	Q04210	160 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	ATG10	Q07879	167 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	AFT2	Q08957	416 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	TRM10	Q12400	293 aa		4.2	□□□□□ -1.74
TRM44	YPL030W	URB1	P34241	1764 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	COX5B	P00425	151 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	AI3	P03877	415 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	PPR1	P07272	904 aa	Predicted RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	RPL1A	P0CX43	217 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	RPL1B	P0CX44	217 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	HAP3	P13434	144 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	CPR1	P14832	162 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	OLE1	P21147	510 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	SAT4	P25333	603 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	ADE1	P27616	306 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TRM44	YPL030W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TRM44	YPL030W	TIP20	P33891	701 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	GEX2	P36173	615 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	POP8	P38208	133 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	AIM3	P38266	947 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	DER1	P38307	211 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	RCK1	P38622	512 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	LAG1	P38703	411 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	YHR122W	P38829	231 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	SRP14	P38985	146 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	JHD1	P40034	492 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	YER121W	P40076	114 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	PMT6	P42934	759 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	BUD13	P46947	266 aa	Predicted RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	ASG7	P46993	209 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	EFM3	P47163	339 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	MTC3	P53077	123 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	BOR1	P53838	576 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	ATG4	P53867	494 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	KIN4	Q01919	800 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	MRPS16	Q02608	121 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	STD1	Q02794	444 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	SNO1	Q03144	224 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	CGI121	Q03705	181 aa	Known RBP	4.19	□□□□□ -1.74
TRM44	YPL030W	YDR391C	Q04170	232 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	YLR407W	Q06070	228 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	TPO1	Q07824	586 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	MED7	Q08278	222 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	POM33	Q12164	279 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	YDL199C	Q12407	687 aa		4.19	□□□□□ -1.74
TRM44	YPL030W	TFC7	Q12415	435 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms