RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W SHR5P41912 237 aa5.93□□□□□ -1.46
CTF19YPL018W IRC6P43615 237 aa5.93□□□□□ -1.46
CTF19YPL018W SEH1P53011 349 aaKnown RBP5.93□□□□□ -1.46
CTF19YPL018W YNR040WP53736 256 aa5.93□□□□□ -1.46
CTF19YPL018W NCE101Q02820 53 aa5.93□□□□□ -1.46
CTF19YPL018W AKR2Q12013 749 aa5.93□□□□□ -1.46
CTF19YPL018W YDL211CQ12121 372 aa5.93□□□□□ -1.46
CTF19YPL018W NFI1Q12216 726 aa5.93□□□□□ -1.46
CTF19YPL018W MHF1Q3E835 90 aa5.93□□□□□ -1.46
CTF19YPL018W SIR3P06701 978 aa5.92□□□□□ -1.46
CTF19YPL018W ARF1P11076 181 aaKnown RBP5.92□□□□□ -1.46
CTF19YPL018W NCP1P16603 691 aaKnown RBP5.92□□□□□ -1.46
CTF19YPL018W PBN1P25580 416 aa5.92□□□□□ -1.46
CTF19YPL018W ITR2P30606 609 aa5.92□□□□□ -1.46
CTF19YPL018W DBF20P32328 564 aa5.92□□□□□ -1.46
CTF19YPL018W HIR2P32480 875 aa5.92□□□□□ -1.46
CTF19YPL018W YBR139WP38109 508 aa5.92□□□□□ -1.46
CTF19YPL018W YBR138CP38277 524 aa5.92□□□□□ -1.46
CTF19YPL018W SIC1P38634 284 aa5.92□□□□□ -1.46
CTF19YPL018W SBE22P38814 852 aa5.92□□□□□ -1.46
CTF19YPL018W GCN20P43535 752 aaKnown RBP5.92□□□□□ -1.46
CTF19YPL018W RET2P43621 546 aa5.92□□□□□ -1.46
CTF19YPL018W MPA43P53583 542 aaPredicted RBP5.92□□□□□ -1.46
CTF19YPL018W CUZ1P53899 274 aa5.92□□□□□ -1.46
CTF19YPL018W YKR011CQ02209 353 aa5.92□□□□□ -1.46
CTF19YPL018W SNZ1Q03148 297 aa5.92□□□□□ -1.46
CTF19YPL018W YMR099CQ03161 297 aaKnown RBP5.92□□□□□ -1.46
CTF19YPL018W RSM10Q03201 203 aa5.92□□□□□ -1.46
CTF19YPL018W RSN1Q03516 953 aa5.92□□□□□ -1.46
CTF19YPL018W NUP53Q03790 475 aa5.92□□□□□ -1.46
CTF19YPL018W CYK3Q07533 885 aa5.92□□□□□ -1.46
CTF19YPL018W BRX1Q08235 291 aaKnown RBP5.92□□□□□ -1.46
CTF19YPL018W SKI7Q08491 747 aaPredicted RBP5.92□□□□□ -1.46
CTF19YPL018W YDL176WQ12027 708 aa5.92□□□□□ -1.46
CTF19YPL018W SCM3Q12334 223 aa5.92□□□□□ -1.46
CTF19YPL018W PAR32Q12515 295 aaKnown RBP5.92□□□□□ -1.46
CTF19YPL018W FLP1P03870 423 aa5.91□□□□□ -1.46
CTF19YPL018W ERD2P18414 219 aa5.91□□□□□ -1.46
CTF19YPL018W DIT1P21623 536 aa5.91□□□□□ -1.46
CTF19YPL018W LDB16P25587 256 aa5.91□□□□□ -1.46
CTF19YPL018W CWH43P25618 953 aa5.91□□□□□ -1.46
CTF19YPL018W RPC82P32349 654 aa5.91□□□□□ -1.46
CTF19YPL018W PRP21P32524 280 aaPredicted RBP5.91□□□□□ -1.46
CTF19YPL018W YPT7P32939 208 aa5.91□□□□□ -1.46
CTF19YPL018W TIF3P34167 436 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W LHS1P36016 881 aa5.91□□□□□ -1.46
CTF19YPL018W SNU114P36048 1008 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W ALG3P38179 458 aa5.91□□□□□ -1.46
CTF19YPL018W ECM8P38246 354 aa5.91□□□□□ -1.46
CTF19YPL018W YBR285WP38354 144 aa5.91□□□□□ -1.46
CTF19YPL018W SSZ1P38788 538 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W NSG1P38837 291 aa5.91□□□□□ -1.46
CTF19YPL018W AST2P39945 430 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W PCL7P40186 285 aa5.91□□□□□ -1.46
CTF19YPL018W SOK1P40317 901 aa5.91□□□□□ -1.46
CTF19YPL018W IKS1P47042 667 aa5.91□□□□□ -1.46
CTF19YPL018W EMC2P47133 292 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W BAT2P47176 376 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W IMD4P50094 524 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W SHE4P51534 789 aa5.91□□□□□ -1.46
CTF19YPL018W LSG1P53145 640 aaKnown RBP5.91□□□□□ -1.46
CTF19YPL018W YSA1Q01976 231 aa5.91□□□□□ -1.46
CTF19YPL018W YOR376WQ08900 122 aa5.91□□□□□ -1.46
CTF19YPL018W NPC2Q12408 173 aa5.91□□□□□ -1.46
CTF19YPL018W APC2Q12440 853 aa5.91□□□□□ -1.46
CTF19YPL018W IRA2P19158 3079 aa5.9□□□□□ -1.46
CTF19YPL018W NAM9P27929 486 aa5.9□□□□□ -1.46
CTF19YPL018W PUP2P32379 260 aa5.9□□□□□ -1.46
CTF19YPL018W EMP70P32802 667 aa5.9□□□□□ -1.46
CTF19YPL018W YKL077WP36081 392 aa5.9□□□□□ -1.46
CTF19YPL018W SRO77P38163 1010 aa5.9□□□□□ -1.46
CTF19YPL018W RPS20P38701 121 aaKnown RBP5.9□□□□□ -1.46
CTF19YPL018W PEX18P38855 283 aa5.9□□□□□ -1.46
CTF19YPL018W YJL193WP39542 402 aa5.9□□□□□ -1.46
CTF19YPL018W RIO2P40160 425 aaKnown RBP5.9□□□□□ -1.46
CTF19YPL018W YNL195CP40168 261 aa5.9□□□□□ -1.46
CTF19YPL018W SWP82P43554 623 aa5.9□□□□□ -1.46
CTF19YPL018W GPG1P53130 126 aa5.9□□□□□ -1.46
CTF19YPL018W SNF12P53628 566 aa5.9□□□□□ -1.46
CTF19YPL018W COS1P53822 381 aa5.9□□□□□ -1.46
CTF19YPL018W SMP3Q04174 516 aa5.9□□□□□ -1.46
CTF19YPL018W YLR446WQ06204 433 aa5.9□□□□□ -1.46
CTF19YPL018W EMG1Q06287 252 aaKnown RBP5.9□□□□□ -1.46
CTF19YPL018W MLC2Q06580 163 aa5.9□□□□□ -1.46
CTF19YPL018W CRT10Q08226 957 aa5.9□□□□□ -1.46
CTF19YPL018W YOS9Q99220 542 aa5.9□□□□□ -1.46
CTF19YPL018W TAD3Q9URQ3 322 aa5.9□□□□□ -1.46
CTF19YPL018W HFA1P32874 2273 aa5.89□□□□□ -1.47
CTF19YPL018W TPK3P05986 398 aa5.89□□□□□ -1.47
CTF19YPL018W SNF6P18888 332 aa5.89□□□□□ -1.47
CTF19YPL018W URE2P23202 354 aaKnown RBP5.89□□□□□ -1.47
CTF19YPL018W YCR100CP25606 316 aa5.89□□□□□ -1.47
CTF19YPL018W CPR3P25719 182 aa5.89□□□□□ -1.47
CTF19YPL018W HSP150P32478 413 aa5.89□□□□□ -1.47
CTF19YPL018W LYP1P32487 611 aa5.89□□□□□ -1.47
CTF19YPL018W MDL1P33310 695 aa5.89□□□□□ -1.47
CTF19YPL018W NIC96P34077 839 aa5.89□□□□□ -1.47
CTF19YPL018W MCM7P38132 845 aa5.89□□□□□ -1.47
CTF19YPL018W TDA11P38854 504 aa5.89□□□□□ -1.47
CTF19YPL018W HRB1P38922 454 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms