RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W IML3P38265 245 aa2.23□□□□□ -2.05
PEP12YOR036W MMS21P38632 267 aa2.23□□□□□ -2.05
PEP12YOR036W LSM12P38828 187 aaKnown RBP2.23□□□□□ -2.05
PEP12YOR036W VPS45P38932 577 aa2.23□□□□□ -2.05
PEP12YOR036W EGT2P42835 1041 aa2.23□□□□□ -2.05
PEP12YOR036W YFL040WP43562 540 aa2.23□□□□□ -2.05
PEP12YOR036W ATG18P43601 500 aa2.23□□□□□ -2.05
PEP12YOR036W YJR030CP47101 745 aa2.23□□□□□ -2.05
PEP12YOR036W BNS1P50084 137 aa2.23□□□□□ -2.05
PEP12YOR036W PNC1P53184 216 aaKnown RBP2.23□□□□□ -2.05
PEP12YOR036W PXR1P53335 271 aaPredicted RBP2.23□□□□□ -2.05
PEP12YOR036W REX2P54964 269 aaKnown RBP2.23□□□□□ -2.05
PEP12YOR036W YMR027WQ04371 470 aa2.23□□□□□ -2.05
PEP12YOR036W APC4Q04601 652 aa2.23□□□□□ -2.05
PEP12YOR036W YHC1Q05900 231 aaKnown RBP2.23□□□□□ -2.05
PEP12YOR036W BUR2Q05949 395 aa2.23□□□□□ -2.05
PEP12YOR036W YLR413WQ06689 675 aa2.23□□□□□ -2.05
PEP12YOR036W YDL109CQ12103 647 aa2.23□□□□□ -2.05
PEP12YOR036W IZH2Q12442 317 aa2.23□□□□□ -2.05
PEP12YOR036W GAL7P08431 366 aa2.22□□□□□ -2.05
PEP12YOR036W RPL23AP0CX41 137 aaKnown RBP2.22□□□□□ -2.05
PEP12YOR036W RPL23BP0CX42 137 aaKnown RBP2.22□□□□□ -2.05
PEP12YOR036W RPS18AP0CX55 146 aaKnown RBP2.22□□□□□ -2.05
PEP12YOR036W RPS18BP0CX56 146 aaPredicted RBP2.22□□□□□ -2.05
PEP12YOR036W RBK1P25332 333 aa2.22□□□□□ -2.05
PEP12YOR036W RPL5P26321 297 aaKnown RBP2.22□□□□□ -2.05
PEP12YOR036W PRR1P28708 518 aa2.22□□□□□ -2.05
PEP12YOR036W PEX18P38855 283 aa2.22□□□□□ -2.05
PEP12YOR036W FET3P38993 636 aa2.22□□□□□ -2.05
PEP12YOR036W YER186CP40101 306 aa2.22□□□□□ -2.05
PEP12YOR036W YFR057WP43625 151 aa2.22□□□□□ -2.05
PEP12YOR036W YGL242CP53066 181 aa2.22□□□□□ -2.05
PEP12YOR036W YGR168CP53293 376 aa2.22□□□□□ -2.05
PEP12YOR036W OKP1P53298 406 aa2.22□□□□□ -2.05
PEP12YOR036W CWC22P53333 577 aaKnown RBP2.22□□□□□ -2.05
PEP12YOR036W MKC7P53379 596 aa2.22□□□□□ -2.05
PEP12YOR036W SKI8Q02793 397 aaPredicted RBP2.22□□□□□ -2.05
PEP12YOR036W TRM82Q03774 444 aa2.22□□□□□ -2.05
PEP12YOR036W DNL4Q08387 944 aaPredicted RBP2.22□□□□□ -2.05
PEP12YOR036W MCT1Q12283 360 aa2.22□□□□□ -2.05
PEP12YOR036W SFM1Q12314 213 aa2.22□□□□□ -2.05
PEP12YOR036W LDB17Q12342 491 aa2.22□□□□□ -2.05
PEP12YOR036W ISY1P21374 235 aaPredicted RBP2.21□□□□□ -2.06
PEP12YOR036W MEK1P24719 497 aaPredicted RBP2.21□□□□□ -2.06
PEP12YOR036W HXT1P32465 570 aa2.21□□□□□ -2.06
PEP12YOR036W RPC25P35718 212 aa2.21□□□□□ -2.06
PEP12YOR036W YKL070WP36087 169 aa2.21□□□□□ -2.06
PEP12YOR036W RCK2P38623 610 aa2.21□□□□□ -2.06
PEP12YOR036W AIM10P39965 576 aaKnown RBP2.21□□□□□ -2.06
PEP12YOR036W BIR1P47134 954 aa2.21□□□□□ -2.06
PEP12YOR036W GTO1P48239 356 aa2.21□□□□□ -2.06
PEP12YOR036W YGL185CP53100 379 aa2.21□□□□□ -2.06
PEP12YOR036W CRH1P53301 507 aa2.21□□□□□ -2.06
PEP12YOR036W VAC7P53950 1165 aa2.21□□□□□ -2.06
PEP12YOR036W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
PEP12YOR036W YMR010WQ03687 405 aa2.21□□□□□ -2.06
PEP12YOR036W BCP1Q06338 283 aa2.21□□□□□ -2.06
PEP12YOR036W RRG7Q08774 242 aaPredicted RBP2.21□□□□□ -2.06
PEP12YOR036W FRE8Q12209 686 aa2.21□□□□□ -2.06
PEP12YOR036W RPN6Q12377 434 aa2.21□□□□□ -2.06
PEP12YOR036W HMS1Q12398 434 aa2.21□□□□□ -2.06
PEP12YOR036W YPR1Q12458 312 aa2.21□□□□□ -2.06
PEP12YOR036W MRPL23Q12487 163 aaPredicted RBP2.21□□□□□ -2.06
PEP12YOR036W NAG1Q8TGN9 163 aa2.21□□□□□ -2.06
PEP12YOR036W SAL1D6W196 494 aa2.2□□□□□ -2.06
PEP12YOR036W ADH2P00331 348 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W AAT2P23542 418 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W MIR1P23641 311 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W GIT1P25346 518 aa2.2□□□□□ -2.06
PEP12YOR036W LDS1P31379 325 aa2.2□□□□□ -2.06
PEP12YOR036W RAD23P32628 398 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W SWD3P38123 315 aa2.2□□□□□ -2.06
PEP12YOR036W SMF2P38778 549 aa2.2□□□□□ -2.06
PEP12YOR036W BAT1P38891 393 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W PET100P38958 111 aa2.2□□□□□ -2.06
PEP12YOR036W HEM14P40012 539 aa2.2□□□□□ -2.06
PEP12YOR036W YNL208WP40159 199 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W PRE5P40302 234 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W UTP18P40362 594 aaPredicted RBP2.2□□□□□ -2.06
PEP12YOR036W YNL320WP42840 284 aa2.2□□□□□ -2.06
PEP12YOR036W COX16P47081 118 aa2.2□□□□□ -2.06
PEP12YOR036W BIO4P53630 237 aa2.2□□□□□ -2.06
PEP12YOR036W YNL260CP53846 198 aa2.2□□□□□ -2.06
PEP12YOR036W SUR7P54003 302 aa2.2□□□□□ -2.06
PEP12YOR036W YLR012CQ07927 99 aa2.2□□□□□ -2.06
PEP12YOR036W DDC1Q08949 612 aa2.2□□□□□ -2.06
PEP12YOR036W SLF1Q12034 447 aaKnown RBP2.2□□□□□ -2.06
PEP12YOR036W ATP16Q12165 160 aa2.2□□□□□ -2.06
PEP12YOR036W HRT3Q12347 344 aa2.2□□□□□ -2.06
PEP12YOR036W SSA3P09435 649 aaKnown RBP2.19□□□□□ -2.06
PEP12YOR036W ITR2P30606 609 aa2.19□□□□□ -2.06
PEP12YOR036W PMT2P31382 759 aa2.19□□□□□ -2.06
PEP12YOR036W DTR1P38125 572 aa2.19□□□□□ -2.06
PEP12YOR036W MIG3P39943 394 aa2.19□□□□□ -2.06
PEP12YOR036W OXA1P39952 402 aa2.19□□□□□ -2.06
PEP12YOR036W GAB1P41733 394 aa2.19□□□□□ -2.06
PEP12YOR036W PMT4P46971 762 aa2.19□□□□□ -2.06
PEP12YOR036W MND1P53102 219 aa2.19□□□□□ -2.06
PEP12YOR036W PRP38Q00723 242 aaPredicted RBP2.19□□□□□ -2.06
PEP12YOR036W FSH2Q05015 223 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms