RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C APC2Q12440 853 aa8.03□□□□□ -1.12
RPD3YNL330C YLR099W-AQ3E798 87 aa8.03□□□□□ -1.12
RPD3YNL330C Q0182Q9ZZW1 134 aa8.03□□□□□ -1.12
RPD3YNL330C SPT15P13393 240 aaKnown RBP8.02□□□□□ -1.13
RPD3YNL330C STE12P13574 688 aa8.02□□□□□ -1.13
RPD3YNL330C RAM1P22007 431 aa8.02□□□□□ -1.13
RPD3YNL330C EXG1P23776 448 aaKnown RBP8.02□□□□□ -1.13
RPD3YNL330C FUN26P31381 517 aa8.02□□□□□ -1.13
RPD3YNL330C ORC2P32833 620 aa8.02□□□□□ -1.13
RPD3YNL330C MRPL37P36532 105 aa8.02□□□□□ -1.13
RPD3YNL330C ALP1P38971 573 aa8.02□□□□□ -1.13
RPD3YNL330C NEO1P40527 1151 aa8.02□□□□□ -1.13
RPD3YNL330C RPE1P46969 238 aa8.02□□□□□ -1.13
RPD3YNL330C AAD10P47182 288 aa8.02□□□□□ -1.13
RPD3YNL330C RPS12P48589 143 aaKnown RBP8.02□□□□□ -1.13
RPD3YNL330C CDH1P53197 566 aa8.02□□□□□ -1.13
RPD3YNL330C YGR250CP53316 781 aaKnown RBP8.02□□□□□ -1.13
RPD3YNL330C PAU12P53343 120 aa8.02□□□□□ -1.13
RPD3YNL330C PGA1P53896 198 aa8.02□□□□□ -1.13
RPD3YNL330C AQR1P53943 586 aa8.02□□□□□ -1.13
RPD3YNL330C DID2P69771 204 aa8.02□□□□□ -1.13
RPD3YNL330C NAT4Q04751 285 aa8.02□□□□□ -1.13
RPD3YNL330C ISR1Q06098 443 aaKnown RBP8.02□□□□□ -1.13
RPD3YNL330C YOR289WQ12012 251 aaPredicted RBP8.02□□□□□ -1.13
RPD3YNL330C YOR214CQ12282 236 aa8.02□□□□□ -1.13
RPD3YNL330C YGR161W-CQ3E744 92 aa8.02□□□□□ -1.13
RPD3YNL330C HOM2P13663 365 aaKnown RBP8.01□□□□□ -1.13
RPD3YNL330C CBS1P14066 229 aa8.01□□□□□ -1.13
RPD3YNL330C MCK1P21965 375 aaKnown RBP8.01□□□□□ -1.13
RPD3YNL330C YCR102CP25608 368 aa8.01□□□□□ -1.13
RPD3YNL330C SFC1P33303 322 aa8.01□□□□□ -1.13
RPD3YNL330C SKN1P33336 771 aa8.01□□□□□ -1.13
RPD3YNL330C OAR1P35731 278 aa8.01□□□□□ -1.13
RPD3YNL330C SDS22P36047 338 aa8.01□□□□□ -1.13
RPD3YNL330C RTC2P38279 296 aa8.01□□□□□ -1.13
RPD3YNL330C NAB3P38996 802 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
RPD3YNL330C HXT9P40885 567 aa8.01□□□□□ -1.13
RPD3YNL330C ECM27P47144 725 aa8.01□□□□□ -1.13
RPD3YNL330C RPL6AQ02326 176 aaKnown RBP8.01□□□□□ -1.13
RPD3YNL330C CTL1Q03220 320 aaKnown RBP8.01□□□□□ -1.13
RPD3YNL330C MTQ2Q03920 221 aaPredicted RBP8.01□□□□□ -1.13
RPD3YNL330C SPC19Q03954 165 aa8.01□□□□□ -1.13
RPD3YNL330C YDR344CQ05510 147 aa8.01□□□□□ -1.13
RPD3YNL330C YLR111WQ12528 110 aa8.01□□□□□ -1.13
RPD3YNL330C CAN1P04817 590 aa8□□□□□ -1.13
RPD3YNL330C RPS18AP0CX55 146 aaKnown RBP8□□□□□ -1.13
RPD3YNL330C RPS18BP0CX56 146 aaPredicted RBP8□□□□□ -1.13
RPD3YNL330C ERD1P16151 362 aa8□□□□□ -1.13
RPD3YNL330C ERD2P18414 219 aa8□□□□□ -1.13
RPD3YNL330C RPA135P22138 1203 aaKnown RBP8□□□□□ -1.13
RPD3YNL330C NPR1P22211 790 aa8□□□□□ -1.13
RPD3YNL330C SLY41P22215 453 aa8□□□□□ -1.13
RPD3YNL330C PUP1P25043 261 aa8□□□□□ -1.13
RPD3YNL330C DOA4P32571 926 aa8□□□□□ -1.13
RPD3YNL330C ECM15P35195 104 aa8□□□□□ -1.13
RPD3YNL330C YKL077WP36081 392 aa8□□□□□ -1.13
RPD3YNL330C ANR2P36090 516 aaPredicted RBP8□□□□□ -1.13
RPD3YNL330C OMA1P36163 345 aa8□□□□□ -1.13
RPD3YNL330C DTR1P38125 572 aa8□□□□□ -1.13
RPD3YNL330C PAU24P38155 120 aa8□□□□□ -1.13
RPD3YNL330C RRF1P38771 230 aa8□□□□□ -1.13
RPD3YNL330C MSS4P38994 779 aa8□□□□□ -1.13
RPD3YNL330C YER137CP40083 148 aaKnown RBP8□□□□□ -1.13
RPD3YNL330C GID8P40208 455 aa8□□□□□ -1.13
RPD3YNL330C APS3P47064 194 aa8□□□□□ -1.13
RPD3YNL330C PMT5P52867 743 aa8□□□□□ -1.13
RPD3YNL330C YGR266WP53326 701 aa8□□□□□ -1.13
RPD3YNL330C DLT1Q04216 342 aa8□□□□□ -1.13
RPD3YNL330C RRN11Q04712 507 aa8□□□□□ -1.13
RPD3YNL330C CRT10Q08226 957 aa8□□□□□ -1.13
RPD3YNL330C YPR022CQ12139 1133 aa8□□□□□ -1.13
RPD3YNL330C FRE6Q12473 712 aa8□□□□□ -1.13
RPD3YNL330C RPS21BQ3E754 87 aaKnown RBP8□□□□□ -1.13
RPD3YNL330C URA3P03962 267 aa7.99□□□□□ -1.13
RPD3YNL330C HIS3P06633 220 aa7.99□□□□□ -1.13
RPD3YNL330C SCL1P21243 252 aaKnown RBP7.99□□□□□ -1.13
RPD3YNL330C DBP2P24783 546 aaKnown RBP7.99□□□□□ -1.13
RPD3YNL330C ITR1P30605 584 aa7.99□□□□□ -1.13
RPD3YNL330C CDC12P32468 407 aaKnown RBP7.99□□□□□ -1.13
RPD3YNL330C PDR3P33200 976 aa7.99□□□□□ -1.13
RPD3YNL330C ECT1P33412 323 aa7.99□□□□□ -1.13
RPD3YNL330C IFA38P38286 347 aa7.99□□□□□ -1.13
RPD3YNL330C PLB1P39105 664 aa7.99□□□□□ -1.13
RPD3YNL330C DPB11P47027 764 aaPredicted RBP7.99□□□□□ -1.13
RPD3YNL330C MDE1P47095 244 aa7.99□□□□□ -1.13
RPD3YNL330C VOA1P53262 265 aa7.99□□□□□ -1.13
RPD3YNL330C TDA7P53882 636 aaPredicted RBP7.99□□□□□ -1.13
RPD3YNL330C YHM2Q04013 314 aa7.99□□□□□ -1.13
RPD3YNL330C MFB1Q04922 465 aa7.99□□□□□ -1.13
RPD3YNL330C ARV1Q06541 321 aa7.99□□□□□ -1.13
RPD3YNL330C CDA2Q06703 312 aa7.99□□□□□ -1.13
RPD3YNL330C OPI10Q08202 246 aa7.99□□□□□ -1.13
RPD3YNL330C PFA4Q12006 378 aa7.99□□□□□ -1.13
RPD3YNL330C ATG41Q12048 136 aa7.99□□□□□ -1.13
RPD3YNL330C TIR4Q12218 487 aaPredicted RBP7.99□□□□□ -1.13
RPD3YNL330C MPD2Q99316 277 aa7.99□□□□□ -1.13
RPD3YNL330C GCN4P03069 281 aa7.98□□□□□ -1.13
RPD3YNL330C YCR100CP25606 316 aa7.98□□□□□ -1.13
RPD3YNL330C BUB3P26449 341 aa7.98□□□□□ -1.13
RPD3YNL330C SUI1P32911 108 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms