RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	FMP52	P40008	231 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	RPN3	P40016	523 aa	Known RBP	2.27	□□□□□ -2.05
KRE33	YNL132W	FCY21	P40039	528 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	COX15	P40086	486 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	PHO86	P46956	311 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	MTR3	P48240	250 aa	Predicted RBP	2.27	□□□□□ -2.05
KRE33	YNL132W	YTP1	P53584	459 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	YLR460C	P54007	376 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	ASI1	P54074	624 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	ERG13	P54839	491 aa	Known RBP	2.27	□□□□□ -2.05
KRE33	YNL132W	AAT1	Q01802	451 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	YKR011C	Q02209	353 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	YET3	Q07451	203 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	YPL199C	Q08954	240 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	AGC1	Q12482	902 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	YDL007C-A	Q2V2Q0	85 aa		2.27	□□□□□ -2.05
KRE33	YNL132W	SAC7	P17121	654 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	KGD2	P19262	463 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	SGV1	P23293	657 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	ANR2	P36090	516 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	TCM62	P38228	572 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	SPC97	P38863	823 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	CIN4	P39110	191 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	NPT1	P39683	429 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	YER130C	P39959	443 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YPT32	P51996	222 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	YGR168C	P53293	376 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	LSC2	P53312	427 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	ARG5,6	Q01217	863 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	TIM44	Q01852	431 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	REC102	Q02721	264 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	SHR3	Q02774	210 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	RIM13	Q03792	727 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	ACK1	Q07622	623 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	DIA2	Q08496	732 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	ALG6	Q12001	544 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	AIM41	Q12032	185 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	ERP3	Q12403	225 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	ZPS1	Q12512	249 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YKL068W-A	Q3E826	78 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	ACC1	Q00955	2233 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	RPL25	P04456	142 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	TRP4	P07285	380 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	SPS4	P09937	338 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	PCT1	P13259	424 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	CUP2	P15315	225 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	RNA15	P25299	296 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	URK1	P27515	501 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	TRR1	P29509	319 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	NDC1	P32500	655 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	IES6	P32617	166 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	MTC7	P32633	139 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YBL010C	P32788	280 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	RPS1A	P33442	255 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	YCR087C-A	P37263	153 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	VBA2	P38358	474 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	RRP3	P38712	501 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	WSC4	P38739	605 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	LAS21	P40367	830 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	COA1	P40452	197 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YIL108W	P40483	696 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	SPG5	P42933	373 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	CIN2	P46670	268 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	SPT20	P50875	604 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	RHO3	Q00245	231 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	OST6	Q03723	332 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	TRM82	Q03774	444 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	CSM3	Q04659	317 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	PLB3	Q08108	686 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	MRH1	Q12117	320 aa	Predicted RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	YLL058W	Q12198	575 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	BBP1	Q12365	385 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	POM34	Q12445	299 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YLR361C-A	Q3E795	98 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	MOD5	P07884	428 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	DPM1	P14020	267 aa	Known RBP	2.26	□□□□□ -2.05
KRE33	YNL132W	FUB1	P25659	250 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
KRE33	YNL132W	KAR9	P32526	644 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
KRE33	YNL132W	GPI16	P38875	610 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	PRK1	P40494	810 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	TAX4	P47030	604 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YPR003C	P53394	754 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	YPQ1	Q12010	308 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	RMD5	Q12508	421 aa		2.26	□□□□□ -2.05
KRE33	YNL132W	RPL28	P02406	149 aa	Known RBP	2.25	□□□□□ -2.05
KRE33	YNL132W	HIS5	P07172	385 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	RPL31B	P0C2H9	113 aa	Known RBP	2.25	□□□□□ -2.05
KRE33	YNL132W	NFT1	P0CE68	1218 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
KRE33	YNL132W	CPT1	P17898	393 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	SNF5	P18480	905 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	LAC1	P28496	418 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	VPS21	P36017	210 aa	Known RBP	2.25	□□□□□ -2.05
KRE33	YNL132W	SRL3	P36167	246 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	EHT1	P38295	451 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	HIS2	P38635	335 aa		2.25	□□□□□ -2.05
KRE33	YNL132W	IMD2	P38697	523 aa	Known RBP	2.25	□□□□□ -2.05
KRE33	YNL132W	IKI1	P38874	309 aa		2.25	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms